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[+] Show/hide bicluster #226 rows and columns.
bicluster 226
Phaeodactylum tricornutum
17x78
[+] Show/hide bicluster #226 rows (genes).
bicluster 226 genes
Phaeodactylum tricornutum
17
[+] Show/hide bicluster #226 rows (short gene names).
bicluster 226 short names
Phaeodactylum tricornutum
17
short_name
[+] Show/hide bicluster #226 rows (long gene names).
bicluster 226 long names
Phaeodactylum tricornutum
17
long_name
[+] Show/hide bicluster #226 rows (NCBI RefSeq gene IDs).
bicluster 226 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #226 gene upstream sequences.
bicluster 226 upstream sequences
Phaeodactylum tricornutum
17
upstream
[+] Show/hide bicluster #226 columns (arrays; conditions).
bicluster 226 arrays
Phaeodactylum tricornutum
78
[+] Show/hide bicluster #226 ratios.
bicluster 226 ratios
Phaeodactylum tricornutum
17x78
GENES GSE12015_Si_free_22v19_1 GSE12015_Si_free_22v19_2 GSE12015_Si_free_23v20_2 GSE17237_highlight_12hr_1 GSE17237_highlight_12hr_2 GSE17237_highlight_12hr_3 GSE17237_highlight_24hr_3.1 GSE17237_highlight_30min_1 GSE17237_highlight_30min_2 GSE17237_highlight_3hr_1 GSE17237_highlight_3hr_2 GSE17237_highlight_3hr_3 GSE17237_highlight_6hr_1 GSE17237_highlight_6hr_2 GSE31131_Cadmium_0.12mg_1 GSE31131_Cadmium_0.12mg_2 GSE31131_Cadmium_0.12mg_3 GSE31131_Cadmium_1.2mg_1 GSE31131_Cadmium_1.2mg_2 GSE31131_Cadmium_1.2mg_3 GSE34988_Ammonia_1 GSE34988_Ammonia_2 GSE34988_Ammonia_3 GSE34988_Ammonia_4 GSE34988_Ammonia_5 GSE34988_Control_1 GSE34988_Control_3 GSE34988_Control_4 GSE34988_Control_6 GSE34988_Copper_1 GSE34988_Copper_4 GSE34988_Dispersant_5 GSE34988_Dispersed_oil_4 GSE34988_Mixture_1 GSE34988_Mixture_2 GSE34988_Mixture_3 GSE34988_Mixture_4 GSE34988_Mixture_5 GSE42039_light_0.5h_1 GSE42039_light_0.5h_2 GSE42039_light_0.5h_3 GSE42039_light_24h_1 GSE42039_light_24h_2 GSE42039_light_24h_3 GSE42039_light_6h_1 GSE42039_light_6h_2 GSE42039_light_6h_3 GSE42514_dark_8hr_light_3hr_1 GSE42514_dark_8hr_light_3hr_2 GSE42514_light_0.5hr_1 GSE42514_light_10.5hr_1 GSE42514_light_10.5hr_2 GSE42514_light_15.5hr_1 GSE42514_light_15.5hr_2 GSE42514_light_16hr_dark_30min_2 GSE42514_light_16hr_dark_4hr_1 GSE42514_light_16hr_dark_4hr_2 GSE42514_light_16hr_dark_7.5hr_1 GSE42514_light_16hr_dark_7.5hr_2 GSE42514_light_6hr_1 GSE42514_light_6hr_2 GSE55959_BlueLight_0.5h_rep1 GSE55959_BlueLight_0.5h_rep2 GSE55959_BlueLight_24h_rep1 GSE55959_BlueLight_6h_rep1 GSE55959_BlueLight_6h_rep2 GSE55959_BlueLight_6h_rep3 GSE55959_GreenLight_0.5h_rep2 GSE55959_GreenLight_0.5h_rep3 GSE55959_GreenLight_24h_rep2 GSE55959_GreenLight_6h_rep1 GSE55959_GreenLight_6h_rep2 GSE55959_GreenLight_6h_rep3 GSE55959_RedLight_0.5h_rep3 GSE55959_RedLight_24h_rep3 GSE55959_RedLight_6h_rep1 GSE55959_RedLight_6h_rep2 GSE55959_RedLight_6h_rep3
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[+] Show/hide bicluster #226 motif PSSM #1. bicluster 226 motif PSSM #1 Phaeodactylum tricornutum 15x4
POSITION A C G T
1 0 0 0.2 0.8
2 0.133333 0.333333 0 0.533333
3 0.133333 0.466667 0.333333 0.066667
4 0.4 0.133333 0.266667 0.2
5 0 0.333333 0 0.666667
6 0 0.333333 0.4 0.266667
7 0 0 0.133333 0.866667
8 0 0 0 1
9 0 1 0 0
10 0.6 0.066667 0.066667 0.266667
11 0 0.8 0 0.2
12 0 0.333333 0 0.666667
13 0 0.133333 0.666667 0.2
14 0.4 0 0 0.6
15 0 1 0 0 [+] Show/hide bicluster #226 motif PSSM #2. bicluster 226 motif PSSM #2 Phaeodactylum tricornutum 15x4
POSITION A C G T
1 0 0.923077 0.076923 0
2 0.307692 0.076923 0.307692 0.307692
3 0.230769 0.538462 0.076923 0.153846
4 0 0.230769 0.769231 0
5 0.384615 0.615385 0 0
6 1 0 0 0
7 1 0 0 0
8 1 0 0 0
9 0.692308 0.230769 0 0.076923
10 0.538462 0.384615 0 0.076923
11 0 0 0.769231 0.230769
12 0 0.692308 0.153846 0.153846
13 0.307692 0 0.692308 0
14 0.230769 0.461538 0.076923 0.230769
15 0.076923 0.692308 0.076923 0.153846 |