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[+] Show/hide bicluster #228 rows and columns.
bicluster 228
Phaeodactylum tricornutum
16x78
[+] Show/hide bicluster #228 rows (genes).
bicluster 228 genes
Phaeodactylum tricornutum
16
[+] Show/hide bicluster #228 rows (short gene names).
bicluster 228 short names
Phaeodactylum tricornutum
16
short_name
[+] Show/hide bicluster #228 rows (long gene names).
bicluster 228 long names
Phaeodactylum tricornutum
16
long_name
[+] Show/hide bicluster #228 rows (NCBI RefSeq gene IDs).
bicluster 228 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #228 gene upstream sequences.
bicluster 228 upstream sequences
Phaeodactylum tricornutum
16
upstream
[+] Show/hide bicluster #228 columns (arrays; conditions).
bicluster 228 arrays
Phaeodactylum tricornutum
78
[+] Show/hide bicluster #228 ratios.
bicluster 228 ratios
Phaeodactylum tricornutum
16x78
GENES GSE12015_Si_free_11v18_2 GSE12015_Si_free_22v19_1 GSE12015_Si_free_22v19_2 GSE17237_highlight_12hr_1 GSE17237_highlight_12hr_2 GSE17237_highlight_12hr_3 GSE17237_highlight_24hr_3.1 GSE17237_highlight_30min_1 GSE17237_highlight_30min_2 GSE17237_highlight_30min_3 GSE17237_highlight_3hr_1 GSE17237_highlight_3hr_2 GSE17237_highlight_3hr_3 GSE17237_highlight_48hr_1 GSE17237_highlight_48hr_2 GSE17237_highlight_48hr_3 GSE17237_highlight_6hr_1 GSE17237_highlight_6hr_2 GSE17237_highlight_6hr_3 GSE31131_Cadmium_0.12mg_2 GSE34988_Ammonia_1 GSE34988_Ammonia_3 GSE34988_Cadmium_1 GSE34988_Cadmium_5 GSE34988_Control_4 GSE34988_Control_6 GSE34988_Dispersant_5 GSE34988_Dispersed_oil_1 GSE34988_Dispersed_oil_5 GSE34988_Mixture_1 GSE34988_Mixture_4 GSE34988_Oil_1 GSE34988_Oil_2 GSE34988_Oil_3 GSE34988_Oil_5 GSE34988_Salinity_15ppt_3 GSE34988_Silver_1 GSE34988_Silver_3 GSE34988_Simazine_1 GSE42039_Dark_treated_48h_1 GSE42039_Dark_treated_48h_2 GSE42039_Dark_treated_48h_3 GSE42039_light_0.5h_1 GSE42039_light_0.5h_2 GSE42039_light_0.5h_3 GSE42039_light_24h_1 GSE42039_light_24h_3 GSE42514_dark_8hr_light_3hr_1 GSE42514_dark_8hr_light_3hr_2 GSE42514_light_0.5hr_1 GSE42514_light_0.5hr_2 GSE42514_light_10.5hr_1 GSE42514_light_10.5hr_2 GSE42514_light_16hr_dark_30min_1 GSE42514_light_16hr_dark_30min_2 GSE42514_light_16hr_dark_4hr_1 GSE42514_light_16hr_dark_4hr_2 GSE42514_light_16hr_dark_7.5hr_1 GSE42514_light_16hr_dark_7.5hr_2 GSE42514_light_6hr_1 GSE42514_light_6hr_2 GSE55959_BlueLight_0.5h_rep1 GSE55959_BlueLight_0.5h_rep2 GSE55959_BlueLight_0.5h_rep3 GSE55959_BlueLight_24h_rep2 GSE55959_BlueLight_6h_rep1 GSE55959_GreenLight_0.5h_rep1 GSE55959_GreenLight_0.5h_rep2 GSE55959_GreenLight_0.5h_rep3 GSE55959_GreenLight_24h_rep2 GSE55959_RedLight_0.5h_rep1 GSE55959_RedLight_0.5h_rep2 GSE55959_RedLight_0.5h_rep3 GSE55959_RedLight_24h_rep1 GSE55959_RedLight_24h_rep2 GSE55959_RedLight_6h_rep1 GSE55959_RedLight_6h_rep2 GSE55959_RedLight_6h_rep3
17324 0.156722482052819 -0.442408662796738 -0.541890213976154 2.23300614016425 1.62758383806405 0.912174172520442 1.8292119250756 1.37921063118703 -0.321971533033668 0.846964716296638 0.337846160332548 0.220541998857326 0.955060529119028 1.09589838261692 1.23728828866642 1.46234077810921 1.27400118449745 -0.515753187839522 1.49614208713248 0.600962252864631 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -2.61065376807588 -2.6764616429897 -2.54129370723166 -1.67029299355989 -1.37785207231521 -1.8366461902855 -0.375832131001973 0.327074898474664 0.162176792602044 0.351125837512257 0.22975041726176 0.269576356024893 -1.15234550746426 -0.598942841772448 0.299403939982015 0.230382743110936 0.288809837061543 0.191776568902577 0.237468106319536 0.248037906868247 -0.402897073351872 0 -1.53397584739503 -1.43482424226101 -1.25452643863509 0.188357559727326 -0.613609905258698 -1.29437310817932 -1.5730925312423 -1.17546509563438 -0.667776206463353 -1.06000777252019 -1.0223165401549 -1.08918331534776 -0.509357321860755 -0.927622023773138 -0.593671980520486 -0.695575048733642 -0.867940781473499
17414 0.149108354758869 -0.182897924428903 -0.495428974949236 1.90213551323782 1.53114168104151 0.799033831064966 1.70723175256268 1.19907666703713 0.0395215521778027 0.796016716274581 0.126105945788327 0.34720543467424 0.85225994014369 1.1358841869705 0.712335059127347 1.12484513275281 1.63991237880223 -0.285724040486844 1.2820071367929 0.434967615923224 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -2.84109737493708 -3.05537991413114 -2.94743303469809 -1.50596424057668 -1.34678471559517 -1.3441850533435 -0.517695907381688 0.362850803950965 0 0.094283219962363 0.322130139126767 0.0350887806635963 -0.689042533706694 -0.644610322115655 0.177537464337903 0.128344562011802 0.211456618337528 0.105111897882066 0.348095460397838 0.178877903308867 -0.110874045424254 -0.100447353657893 -1.51471586525518 -1.57984509671541 -1.82398018869921 0.174744934467473 -0.793440169384113 -2.21828270757226 -1.19951356189825 -1.09643354897929 -0.840472320687327 -0.860589259214604 -0.773523678317088 -0.920420133559946 -0.671485491133576 -0.78811433216532 -0.737571159400183 -0.929925527866616 -1.13226102821188
17519 0.210679769341807 -0.246551273692826 -0.352341985610643 1.82947233708649 1.71819229113381 0.875560305393821 1.80086273753661 1.04298627421639 -0.109530528852442 0.718710846244579 0.270199212008209 0.473763083100435 0.823246414122693 1.37229508593927 0.943220253689154 1.37799190296845 1.34685152319158 -0.182626019295222 1.28624855822151 0.492564628511494 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -2.52937294114769 -2.72577655010913 -2.67085685758215 -1.78103442114408 -1.55929990987887 -1.77144768639891 -0.213405874035604 0.352803755026202 0.344104187446705 0.373191415806804 0.364719240895713 0.316642879467126 -0.981408486033291 -0.524015124267321 0.134737883398357 0.156234830488649 0.232582101989616 0.177691367605029 0.253972298401717 0.217593001870013 -0.191851797315607 0.144476977159649 -1.59834966048141 -1.81981195325514 -1.58539031695842 0.170504273199382 -0.519294522651246 -1.64845857045239 -1.62735444092036 -1.36070521281734 -0.331665609097887 -1.1206626425698 -1.1914183605589 -1.19363562116384 -0.494501904020466 -0.47815685388966 -0.576580400745975 -0.826039410435174 -0.773996207951986
17846 0 -0.214611449728079 -0.212452380817334 1.84596361606753 1.51812771390142 0.88316713794035 1.6921098048671 1.14625400285248 -0.0202549451413382 0.687870718687798 0.2268591279691 0.425054457079146 0.882695021538534 1.31295283469258 0.817033417824949 1.27200969124848 1.16906816434269 -0.257823054907735 1.21864758342977 0.292217022655907 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -2.57942271878751 -2.74350844936376 -2.68920111593407 -1.787981222545 -1.73612358077427 -1.73709841200742 -0.388804911476089 0.430199890888365 0.499403182003507 0.562259897897573 0.405454355215162 0.395869397126974 -0.686047519294014 -0.330649705067158 0.197859015873312 0.309020372813418 0.342176900495089 0.315194102905014 0.408534865725154 0.263655255153538 0.110689540539298 0.35342693808732 -1.69614650467278 -2.3841784249314 -1.51878770527997 0.238641205379205 -0.51731489739394 -1.43978745480072 -1.50036757918799 -1.39566177398788 -0.792390524481851 -0.998809023414402 -1.02639232049828 -1.32276954673038 -0.341304091783635 -0.459415694943358 -0.327032447540181 -0.795311307294715 -0.889535778907736
17954 0.223670484222473 -0.199665166942334 -0.211118576859384 2.05009730696016 1.59275383865703 0.645094296962664 1.14404888452596 0.950750566387443 -0.468296086231418 0.778411988397125 0.557907416547952 0.233427908440267 0.706744478420016 1.00702205034144 0.711035101981249 0.962737000381402 1.49006961359302 -0.648004492987592 1.11835359989283 0.187261856159235 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -2.98826255149447 -3.00536808014932 -2.94307954060159 -1.88712004671632 -1.28218458921161 -1.5501052788155 -0.616557818423634 0.204503926005377 0.399655838944696 0.3341801475591 0.396686176079129 0.246271944026283 -0.510972853696211 -0.302418500917318 0.0653693726110472 0 0.164640260108091 0.0124916239388465 0.151027170752997 0.0945575768454543 0.00861803030200081 0.16464622767919 -1.65604015384824 -2.14799526740647 -1.42220931148118 0.0262029686548994 -0.625072043702629 -1.64656845733232 -1.54565661325156 -1.07000407378557 -0.958389627436425 -1.30143077555662 -1.35876579026961 -1.42205913900673 -0.720015566456404 -0.855116916381319 -0.66092054920909 -0.779393643493615 -0.741956739459311
18859 0.329222483417158 -0.168623492908295 -0.223480275460213 2.1175315416318 1.83335686827942 0.780147992616168 1.83586263789448 1.14857331145268 -0.104810444702548 0.964279331678377 0.450855683081522 0.502241878234805 0.940911444960155 1.37012579740646 0.898837119729505 1.26036536972456 1.12142609564507 -0.308458669215389 1.41782363200424 0.528727504705098 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -2.93333854892752 -3.01811701365922 -2.95524666752664 -1.5765199418046 -1.23389740541458 -1.33188926086486 -0.184443864060472 0.391936544807466 0.488885959518166 0.468402478815194 0.458261143712261 0.371942323532726 -0.96350173107766 -0.569915508245487 0.127126005869344 0.00398577075692544 0.204929656908873 0.0199641429880142 0.299167245248653 0.192226413914996 -0.0520619210757415 0.1558722687486 -1.36557808955676 -1.70079487835086 -1.23568157349516 0.176520655935349 -0.303155378026842 -1.74750285821598 -1.29978267453902 -0.907641108402668 -0.453024786395004 -0.976456074905852 -0.832793550283484 -0.950542755779147 -0.291863598763446 -0.350015337542309 -0.340095010763401 -0.651254465333731 -1.01444506448811
19615 0.19682857733743 0.0775861037203041 -0.123930052301343 1.8249558886883 1.47848582720029 0.902421450325529 1.56901587297563 1.06795102517561 0.0491382564430755 0.725946213763478 0.26529695329795 0.315331675130304 0.759798028462078 1.0666317467441 0.846069414465375 1.25682530435907 1.19612037455319 -0.334322342605311 1.16443594584921 0.382966441092893 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -3.04240781368866 -3.33338100671711 -3.19879320398705 -1.8364837810309 -1.61681366902189 -1.91963238681249 0.141672519595651 0.36715649815849 -0.059602780915098 0.370533514860385 0.242412616755867 0.30396106389093 -1.16637302625955 -0.586623549731396 0 0.24469994788986 0.110868188112936 0.286733335049113 0.193528273919772 0.347279167346435 -0.488940799340017 0.0975651740399457 -1.51111757311684 -1.41093272349761 -1.47429183243343 0.277543946094423 -0.35610337754998 -1.71552690124713 -1.75227404242065 -1.40664351449971 -0.0189577401005811 -0.819916658588632 -0.992105665427967 -1.15091009569115 -0.169942698752595 -0.245796625969681 -0.324289286792095 -0.4447394356606 -0.740750152664368
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23748 0.330761331207432 0.0552682835444211 0.0260060686372105 2.129227765093 1.48606926137206 0.878981790368442 1.86877977816765 1.30442941517973 -0.198470805329033 0.755431009329728 0.342933698896273 0.45322370059411 0.919442155321851 1.65225723066825 0.82009693571187 1.19626627690686 1.22674894028947 -0.342833444579803 1.48514857217132 0.363363720889417 -0.0484594619818256 0.938599825164334 -2.02782984017755 -2.91877060932879 0.912855995489245 0.313589854185728 0.0106702603165148 0.276911711872307 0.128261969717515 0.320047675296596 0.405014405299415 -0.539223248139001 0.149617644782245 -0.122256448411996 -0.622222255488349 -0.938675177681798 -0.29915047721941 -0.150727413028116 -0.416206109980436 -2.38835529232627 -2.72002389621539 -2.67081493543541 -2.44304683091896 -2.21560855683046 -2.03498374771929 -0.158809377927031 0.503507870099353 0.377783357442167 0.176353528217743 0.00457201511063693 -0.0593448358061099 -1.07754491766847 -1.02649238837686 -0.0438155355810014 0 0.164932068957325 0.223855972109866 0.517993436275326 0.271283774149069 -0.375140557913462 0.00485869532529979 -2.22871922776693 -2.41318846928912 -2.0938849260366 0.166647211018028 -0.370599356025003 -2.12673904377962 -2.01756113318633 -1.84303337346888 -0.456916024778365 -1.1612754967099 -1.22146220771748 -1.10804794839433 -0.247481043273481 0.0166735181817787 -0.692045634143158 -1.0679685676103 -1.49115026013126
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27125 0 -0.220669558193404 -0.366835995301071 2.12047575924975 1.7669400744887 0.643038776753987 1.54541189288188 1.11421756246713 -0.0668907730411694 0.745776242068224 0.339119497878324 0.244812912656457 0.809608378008318 0.753046143031568 0.508873021751251 0.921887588336944 1.27538819315309 -0.277859891231325 1.38015528385117 0.793441534827426 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -3.01382256154165 -3.24477566527111 -3.18978599164039 -2.02605627226378 -1.61563605255886 -1.94388088844566 -0.0677388954420749 0.398428556142641 0.215442210438809 0.391737289362112 0.333748732974361 0.252081559962601 -1.08037836860683 -0.692483836235722 0.234314311009509 0.172989231501093 0.217659134811066 0.137363809813848 0.285256482942573 0.204526366885633 -0.22075163328077 0.121010321800559 -1.61338815496884 -1.82178242032046 -1.59127047552083 0.150582709263776 -0.351468222968698 -1.6186568754468 -1.57844333679623 -1.3098513729149 -0.372729335223118 -0.944041204502643 -0.872529018844635 -0.96539415626334 -0.235484257499726 -0.445013094449596 -0.377575904829089 -0.523900375115722 -0.919840815530866
28234 0.282128107508763 -0.17936433511094 -0.0938894702521938 1.77861701352247 1.58502721876004 0.848014809444182 1.41717685073889 0.937565891597663 -0.0189373513613517 0.648869148465932 0.0931209147446403 0.693808097372549 0.948210744515366 1.14427859208253 0.774754230946133 1.22131012050081 1.04764530684075 -0.242436166062592 1.17740908066748 0.34184558872184 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -2.5084700171429 -2.59394239674775 -2.5158455178592 -2.08406447519589 -1.80896103087088 -2.21917000975105 -0.295018299355012 0.39682639460453 0.294629145872101 0.368965951906082 0.191871985318631 0.218655313252416 -0.667383927410026 -0.387955519552259 0.182738586704393 0.105774044447007 0.210417797141556 0.126639863144089 0.320383382749406 0.215141785256776 -0.164571631125611 0.156676057302212 -1.91466827341331 -2.0500730580657 -1.69196024187048 0.253300363111739 -0.622060342782829 -1.96856021828123 -1.95422901298937 -1.68029395829743 -0.531072962360014 -1.27905126627335 -1.22346507464212 -1.45192437751943 -0.52382276136577 -0.832140504029316 -0.596839345309548 -0.574419299890896 -0.75306393080093
50886 0.609374986061543 -0.0769863734282993 -0.335283950954243 2.17787851295581 1.54957330389482 0.727544911689372 1.70685269323844 1.39752310279678 0.0270914979228323 0.994072988295803 0.6344556321957 0.187732160827103 0.490713759956687 1.0347001326931 1.04686103558981 1.0055869311584 1.55745356897188 -0.416173412661943 1.28221342153025 0.789599566990661 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -2.35130470816405 -2.5558020611915 -2.51200606767715 -1.29434420346629 -1.10182004641908 -1.78282502912872 -0.601883156555942 0.337962043510849 0.233674533385114 0.444896450501609 0.255070657881263 0.295800602934478 -0.856384530487435 -0.285738970412198 0.246791149891061 0.406083061853521 0.237229924946884 0.392537015584028 0.212065504595238 0.355832944496374 -0.14647633245476 0.321740438834407 -1.4792509865497 -2.15950120360706 -1.34972958715136 0.142486893906826 -0.753486366623129 -1.42251402460706 -1.31400807736671 -1.10927276400794 -0.887390685830475 -0.989228622923335 -0.911066584112612 -0.932497842877004 -0.600604946976435 -0.556548014269703 -0.564965084557278 -1.00152134183417 -1.38167073120428
51018 0.267044895943043 -0.104475854065491 -0.288243846498734 1.77245400691611 1.51403026755686 0.859077860953488 1.57192421711182 1.10186256911995 -0.0808579166706266 0.591010989950485 0.0916730380620429 0.685426484022054 0.946402817051708 1.02314236174906 0.945472257192065 1.46693971949584 1.14371197902943 -0.272623567141909 1.16759478610726 0.590985206176036 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -2.98116051975948 -3.05378373956179 -2.99466557761371 -1.90184740835421 -1.74451637205606 -1.8504853991834 -0.124019693497155 0.477704148124662 0.316749046120117 0.371175237597639 0.244098478729317 0.0589749445599958 -0.710044190945386 -0.490234286430463 0.408972596302801 0.0197328018137181 0.357142042400724 0.0141799893073329 0.415845834068888 0.169811506714281 0.164883447303632 0.0368695632301613 -1.75862735214495 -1.52600269256363 -1.66134356479062 0.253188477199703 -0.582615322148999 -1.60535641663912 -1.59044842441743 -1.5252314234581 -0.371394332144816 -0.860508150904992 -0.858593821506011 -1.05543350354836 -0.528603738299904 -0.690830364745852 -0.650767630017213 -0.726057091944929 -0.767679536965821
8185 0.310873097398239 -0.0909614461938777 -0.227340458778432 2.07349190234724 1.63823956655423 0.958910244823356 1.79704907809716 1.16863985079004 -0.118436587064928 0.791546946876067 0.346079013845175 0.256035313539168 0.886862258507883 1.61402686429103 0.956968176105798 1.36092833759305 1.155599964594 -0.286772893018066 1.43581442839617 0.21660776600803 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -2.14610224567188 -2.35370246808389 -2.25800009007176 -1.49536495282755 -1.71427127618241 -1.81526366356439 0.00766101130008038 0.443287433217134 0.413427453533515 0.566720000489107 0.317617668180047 0.335585101043223 -0.474884334741183 -0.186085406844626 0.272030862415789 0.404714774290748 0.366566715269359 0.415904597506424 0.33227878673771 0.41301771468385 -0.120328369902251 0.382485413299765 -1.73007980166376 -1.8279965892086 -1.81320284586852 0.259518851016119 -0.350125239826465 -1.88451749675427 -1.78007338483968 -1.35607012811262 -0.628511805008399 -1.10908886648223 -1.04734894215563 -1.24049447300252 -0.406205717936027 -0.592050265022542 -0.407587501536676 -0.755083574769337 -1.02130035850483
8686 0.0584235529588197 0.0321577077934392 0.0891601802800096 2.88912721729804 1.42406308179468 0.60765914080001 1.56063988817696 1.31378006296625 0.259552865193297 0.826224503442144 0.377793876259067 0.38066076531648 0.56342633984597 1.00620142760195 0.396314091339508 0.540742708882932 1.96379266907708 -0.388805551519883 1.16033723090117 -0.313629349569948 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -2.58965111954418 -2.62007123654328 -2.51691877223572 -2.06659466371994 -1.70274911523385 -1.93023218154118 -0.0809930178002019 0.56785322822559 -0.0585399124847069 0.254747727639742 0.228826248234943 0.191667946042585 -0.93701555110529 -0.388178485471655 -0.00264655914346502 0.1413741986782 0.184603288277451 0.255208825977364 0.347643691065543 0.411878349749704 -0.22543813279526 0.216993000423601 -1.9785212701417 -1.91168858871656 -1.91875245192558 0.20723432282674 -0.0884315020963925 -1.65773192508284 -1.58947551662487 -1.08664400381712 -0.156345065140511 -0.806465483941347 -0.548392620446466 -0.871319491346157 0.127256569510887 -0.108506284258099 -0.0578214286625418 -0.350172449163701 -0.420131994356123
[+] Show/hide bicluster #228 motif PSSM #1. bicluster 228 motif PSSM #1 Phaeodactylum tricornutum 11x4
POSITION A C G T
1 0 0.142857 0.357143 0.5
2 0.214286 0 0 0.785714
3 0 0.142857 0.857143 0
4 1 0 0 0
5 0 0.928571 0.071429 0
6 0.357143 0.071429 0.071429 0.5
7 0.357143 0 0.642857 0
8 0.071429 0.071429 0 0.857143
9 0 0 1 0
10 0.857143 0 0 0.142857
11 0.214286 0 0.785714 0 [+] Show/hide bicluster #228 motif PSSM #2. bicluster 228 motif PSSM #2 Phaeodactylum tricornutum 19x4
POSITION A C G T
1 0 0 1 0
2 0 0 0 1
3 0 0 1 0
4 0 1 0 0
5 1 0 0 0
6 0 1 0 0
7 0 0 1 0
8 0 0 1 0
9 0 0 1 0
10 0 0.5 0.5 0
11 1 0 0 0
12 0.5 0.5 0 0
13 0 0 1 0
14 0 0 1 0
15 0 0.5 0.5 0
16 1 0 0 0
17 0 0 1 0
18 0 0 1 0
19 0 1 0 0 |