******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.10.0 (Release date: Wed May 21 10:35:36 2014 +1000) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net. This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme.nbcr.net. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= motifs/131/131.seqs.fa ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ 17238 1.0000 500 24838 1.0000 500 42990 1.0000 500 43071 1.0000 500 54612 1.0000 500 21006 1.0000 500 47005 1.0000 500 47883 1.0000 500 54826 1.0000 500 29260 1.0000 500 48167 1.0000 500 48620 1.0000 500 48625 1.0000 500 18067 1.0000 500 43406 1.0000 500 43545 1.0000 500 16445 1.0000 500 16599 1.0000 500 50201 1.0000 500 31133 1.0000 500 43905 1.0000 500 44023 1.0000 500 44181 1.0000 500 50470 1.0000 500 44609 1.0000 500 44776 1.0000 500 50836 1.0000 500 44902 1.0000 500 45350 1.0000 500 19937 1.0000 500 20445 1.0000 500 46187 1.0000 500 36168 1.0000 500 46248 1.0000 500 42818 1.0000 500 43516 1.0000 500 47473 1.0000 500 44743 1.0000 500 35974 1.0000 500 43454 1.0000 500 48497 1.0000 500 37927 1.0000 500 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme motifs/131/131.seqs.fa -oc motifs/131 -dna -minw 12 -maxw 21 -nmotifs 3 -maxsize 500000 model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 12 maxw= 21 minic= 0.00 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 42 wnsites= 0.8 theta: prob= 1 spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 21000 N= 42 strands: + sample: seed= 0 seqfrac= 1 Letter frequencies in dataset: A 0.267 C 0.233 G 0.231 T 0.269 Background letter frequencies (from dataset with add-one prior applied): A 0.267 C 0.233 G 0.231 T 0.269 ******************************************************************************** ******************************************************************************** MOTIF 1 MEME width = 12 sites = 29 llr = 295 E-value = 2.1e-015 ******************************************************************************** -------------------------------------------------------------------------------- Motif 1 Description -------------------------------------------------------------------------------- Simplified A ::1a:6::3a43 pos.-specific C 3:7:a:::6:11 probability G 2:::::a:::52 matrix T 5a1::3:91::5 bits 2.1 * * 1.9 ** * * 1.7 * ** * * 1.5 * ** ** * Relative 1.3 * ** ** * Entropy 1.1 * ** ** * (14.7 bits) 0.8 * ** **** 0.6 ********** 0.4 *********** 0.2 ************ 0.0 ------------ Multilevel TTCACAGTCAGT consensus C T A AA sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------ 31133 458 6.73e-08 ATCACTGCTA TTCACAGTCAGT CCAGAATCCT 36168 289 1.26e-07 TGGGAATCTC CTCACAGTCAGT CAAACTTTAA 43545 146 1.26e-07 TGTATGATTC CTCACAGTCAGT CAACGAAAAA 44743 435 2.70e-07 TGGTTCACAA TTCACAGTCAGA TGCATTCTCG 20445 112 4.05e-07 CGATTATTCG TTCACTGTCAGT CATTATCAGC 50201 206 4.05e-07 ATTCCCCGTG TTCACTGTCAGT TCTTAGAATA 43516 198 7.92e-07 GAATCAGGGG TTCACAGTCAAA ACGTTTGGTT 43905 410 1.34e-06 ACCCAACAAC CTCACAGTCAGG TTGGTCGGCT 45350 149 1.94e-06 CATCTCGCAG CTCACAGTAAAT TCAAGAAAAT 50470 133 2.95e-06 CCGGCGTAAA TTCACAGTCACA GTTCGTACGG 54826 433 4.66e-06 TGACATCGTG TTCACAGTAAAG CCCACCGCAG 54612 422 4.66e-06 CATTTTTCTA TTCACAGTCACG TCATTGTCAC 19937 200 6.57e-06 GTTAGTTACT GTCACAGTCAGC TAGGTATGAT 43071 126 9.69e-06 CGAATTCATA GTCACAGTCAAC GATCGCAGAC 48625 165 1.25e-05 CCATTCACAG GTCACTGTCACA CACGGCAACG 48167 230 1.49e-05 CACACCAACT GTTACAGTAAGT CATCAACGGG 35974 433 1.77e-05 ATCACCTCCA TTAACTGTAAAT AGGTAGTGAC 46248 221 1.77e-05 ATGGAAATTA TTTACAGTAAAA CTATAATAAG 42818 217 2.43e-05 TTCCTTAACT CACACAGTCAAT ATTTGGTGAA 43454 38 2.56e-05 GCCTTTTTTT CTAACTGTAAGA TACCCAATAG 18067 333 2.75e-05 TCTGTATACC CTCACTGCCAGT CAGAAGCCAA 44776 246 2.95e-05 ACGGATCTCA TTGACAGTCACT CGTTCCCGAG 44609 452 2.95e-05 GAATAACTAG TTTACTGTAAAA ACGTTTCGTT 44902 186 3.11e-05 ACGAAAGTGC GTAACTGTAAAT GATACATTTT 16599 323 3.35e-05 GTTCATCCTT CTAACTGTAAGG AGGTGCCACT 17238 113 3.35e-05 CCCTCGGACT GTCACCGTCAAA CGCGATGGAT 47005 191 3.65e-05 CATGAATTAC TTTACAGTTAAT GCTCCGCTAT 42990 244 3.65e-05 TTTTTCTCCG CTCACAGACAGG GATAGGAATG 47473 132 5.15e-05 TATCATGGGC TTCACGGTTAGT GAGTGGAGCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 31133 6.7e-08 457_[+1]_31 36168 1.3e-07 288_[+1]_200 43545 1.3e-07 145_[+1]_343 44743 2.7e-07 434_[+1]_54 20445 4.1e-07 111_[+1]_377 50201 4.1e-07 205_[+1]_283 43516 7.9e-07 197_[+1]_291 43905 1.3e-06 409_[+1]_79 45350 1.9e-06 148_[+1]_340 50470 3e-06 132_[+1]_356 54826 4.7e-06 432_[+1]_56 54612 4.7e-06 421_[+1]_67 19937 6.6e-06 199_[+1]_289 43071 9.7e-06 125_[+1]_363 48625 1.2e-05 164_[+1]_324 48167 1.5e-05 229_[+1]_259 35974 1.8e-05 432_[+1]_56 46248 1.8e-05 220_[+1]_268 42818 2.4e-05 216_[+1]_272 43454 2.6e-05 37_[+1]_451 18067 2.7e-05 332_[+1]_156 44776 3e-05 245_[+1]_243 44609 3e-05 451_[+1]_37 44902 3.1e-05 185_[+1]_303 16599 3.4e-05 322_[+1]_166 17238 3.4e-05 112_[+1]_376 47005 3.6e-05 190_[+1]_298 42990 3.6e-05 243_[+1]_245 47473 5.1e-05 131_[+1]_357 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 1 width=12 seqs=29 31133 ( 458) TTCACAGTCAGT 1 36168 ( 289) CTCACAGTCAGT 1 43545 ( 146) CTCACAGTCAGT 1 44743 ( 435) TTCACAGTCAGA 1 20445 ( 112) TTCACTGTCAGT 1 50201 ( 206) TTCACTGTCAGT 1 43516 ( 198) TTCACAGTCAAA 1 43905 ( 410) CTCACAGTCAGG 1 45350 ( 149) CTCACAGTAAAT 1 50470 ( 133) TTCACAGTCACA 1 54826 ( 433) TTCACAGTAAAG 1 54612 ( 422) TTCACAGTCACG 1 19937 ( 200) GTCACAGTCAGC 1 43071 ( 126) GTCACAGTCAAC 1 48625 ( 165) GTCACTGTCACA 1 48167 ( 230) GTTACAGTAAGT 1 35974 ( 433) TTAACTGTAAAT 1 46248 ( 221) TTTACAGTAAAA 1 42818 ( 217) CACACAGTCAAT 1 43454 ( 38) CTAACTGTAAGA 1 18067 ( 333) CTCACTGCCAGT 1 44776 ( 246) TTGACAGTCACT 1 44609 ( 452) TTTACTGTAAAA 1 44902 ( 186) GTAACTGTAAAT 1 16599 ( 323) CTAACTGTAAGG 1 17238 ( 113) GTCACCGTCAAA 1 47005 ( 191) TTTACAGTTAAT 1 42990 ( 244) CTCACAGACAGG 1 47473 ( 132) TTCACGGTTAGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 20538 bayes= 10.1075 E= 2.1e-015 -1150 42 -16 85 -295 -1150 -1150 184 -95 157 -274 -96 190 -1150 -1150 -1150 -1150 210 -1150 -1150 122 -275 -274 21 -1150 -1150 211 -1150 -295 -275 -1150 179 22 142 -1150 -196 190 -1150 -1150 -1150 51 -75 106 -1150 5 -175 -42 85 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 29 E= 2.1e-015 0.000000 0.310345 0.206897 0.482759 0.034483 0.000000 0.000000 0.965517 0.137931 0.689655 0.034483 0.137931 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.620690 0.034483 0.034483 0.310345 0.000000 0.000000 1.000000 0.000000 0.034483 0.034483 0.000000 0.931034 0.310345 0.620690 0.000000 0.068966 1.000000 0.000000 0.000000 0.000000 0.379310 0.137931 0.482759 0.000000 0.275862 0.068966 0.172414 0.482759 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 regular expression -------------------------------------------------------------------------------- [TCG]TCAC[AT]GT[CA]A[GA][TA] -------------------------------------------------------------------------------- Time 17.68 secs. ******************************************************************************** ******************************************************************************** MOTIF 2 MEME width = 12 sites = 7 llr = 92 E-value = 6.3e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif 2 Description -------------------------------------------------------------------------------- Simplified A 3:::a:1:::96 pos.-specific C 3:3::a:::::1 probability G 4::a:::a:a13 matrix T :a7:::9:a::: bits 2.1 * * * * 1.9 * *** *** 1.7 * *** *** 1.5 * *** *** Relative 1.3 * ******** Entropy 1.1 ********** (19.0 bits) 0.8 ********** 0.6 *********** 0.4 ************ 0.2 ************ 0.0 ------------ Multilevel GTTGACTGTGAA consensus A C G sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------ 46248 285 1.33e-07 ACCCGGATTT CTTGACTGTGAA TCATCAGCAG 44181 183 3.24e-07 TAAAGTTGCG GTCGACTGTGAA TTCCATCGTC 44776 332 4.48e-07 CCTTTGGAGG ATTGACTGTGAG TGCGGGGAGG 43545 189 5.63e-07 AACGCGGTCG CTCGACTGTGAA GTCACGAATA 54612 221 8.61e-07 TCACATTGAC ATTGACTGTGAC AGTGAAAGTG 36168 265 9.76e-07 AGAGTCTGGA GTTGACAGTGAA CATGGGAATC 47005 337 1.32e-06 AAATAGGTTT GTTGACTGTGGG ACGCAACCGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 46248 1.3e-07 284_[+2]_204 44181 3.2e-07 182_[+2]_306 44776 4.5e-07 331_[+2]_157 43545 5.6e-07 188_[+2]_300 54612 8.6e-07 220_[+2]_268 36168 9.8e-07 264_[+2]_224 47005 1.3e-06 336_[+2]_152 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 2 width=12 seqs=7 46248 ( 285) CTTGACTGTGAA 1 44181 ( 183) GTCGACTGTGAA 1 44776 ( 332) ATTGACTGTGAG 1 43545 ( 189) CTCGACTGTGAA 1 54612 ( 221) ATTGACTGTGAC 1 36168 ( 265) GTTGACAGTGAA 1 47005 ( 337) GTTGACTGTGGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 20538 bayes= 10.4972 E= 6.3e+003 10 30 89 -945 -945 -945 -945 189 -945 30 -945 141 -945 -945 211 -945 190 -945 -945 -945 -945 210 -945 -945 -90 -945 -945 167 -945 -945 211 -945 -945 -945 -945 189 -945 -945 211 -945 168 -945 -69 -945 110 -70 30 -945 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 7 E= 6.3e+003 0.285714 0.285714 0.428571 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.285714 0.000000 0.714286 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.142857 0.000000 0.000000 0.857143 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.857143 0.000000 0.142857 0.000000 0.571429 0.142857 0.285714 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 regular expression -------------------------------------------------------------------------------- [GAC]T[TC]GACTGTGA[AG] -------------------------------------------------------------------------------- Time 34.77 secs. ******************************************************************************** ******************************************************************************** MOTIF 3 MEME width = 16 sites = 8 llr = 114 E-value = 8.6e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif 3 Description -------------------------------------------------------------------------------- Simplified A 3116::::1:5a:9:a pos.-specific C :55:::::395::15: probability G :1431::911::a:5: matrix T 83:19aa15::::::: bits 2.1 * 1.9 ** ** * 1.7 ** ** * 1.5 **** * *** * Relative 1.3 **** * *** * Entropy 1.1 * **** ******* (20.6 bits) 0.8 * **** ******* 0.6 * ****** ******* 0.4 * ****** ******* 0.2 **************** 0.0 ---------------- Multilevel TCCATTTGTCAAGACA consensus ATGG C C G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ---------------- 48167 93 6.43e-09 AGGTCAAGGC TTCATTTGTCAAGAGA TTTTTTCAGG 44181 350 1.37e-08 ATTTTTGGCA TCCATTTGACCAGAGA GCATACTGGT 43454 209 5.31e-08 CAAGCCTTTC TCGATTTGTCAAGCGA AAACTGCCAA 44609 59 1.01e-07 ATATTTGTGC TGCGTTTGCCAAGACA CTAGCTGACA 54612 4 1.86e-07 ACG AACGTTTGTCCAGACA ATTCGCTCGT 54826 485 2.67e-07 TGTGATTAAC TTGATTTTCCCAGACA 48620 136 3.12e-07 CCGATACTCC ACAATTTGGCCAGACA TTCGTTGGTG 44023 354 1.12e-06 GTGTCGCATA TCGTGTTGTGAAGAGA TAGGTCTGAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 48167 6.4e-09 92_[+3]_392 44181 1.4e-08 349_[+3]_135 43454 5.3e-08 208_[+3]_276 44609 1e-07 58_[+3]_426 54612 1.9e-07 3_[+3]_481 54826 2.7e-07 484_[+3] 48620 3.1e-07 135_[+3]_349 44023 1.1e-06 353_[+3]_131 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 3 width=16 seqs=8 48167 ( 93) TTCATTTGTCAAGAGA 1 44181 ( 350) TCCATTTGACCAGAGA 1 43454 ( 209) TCGATTTGTCAAGCGA 1 44609 ( 59) TGCGTTTGCCAAGACA 1 54612 ( 4) AACGTTTGTCCAGACA 1 54826 ( 485) TTGATTTTCCCAGACA 1 48620 ( 136) ACAATTTGGCCAGACA 1 44023 ( 354) TCGTGTTGTGAAGAGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 20370 bayes= 11.3136 E= 8.6e+003 -10 -965 -965 148 -109 110 -89 -10 -109 110 70 -965 122 -965 11 -110 -965 -965 -89 170 -965 -965 -965 189 -965 -965 -965 189 -965 -965 192 -110 -109 10 -89 90 -965 191 -89 -965 90 110 -965 -965 190 -965 -965 -965 -965 -965 211 -965 171 -89 -965 -965 -965 110 111 -965 190 -965 -965 -965 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 8 E= 8.6e+003 0.250000 0.000000 0.000000 0.750000 0.125000 0.500000 0.125000 0.250000 0.125000 0.500000 0.375000 0.000000 0.625000 0.000000 0.250000 0.125000 0.000000 0.000000 0.125000 0.875000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.875000 0.125000 0.125000 0.250000 0.125000 0.500000 0.000000 0.875000 0.125000 0.000000 0.500000 0.500000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.875000 0.125000 0.000000 0.000000 0.000000 0.500000 0.500000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 regular expression -------------------------------------------------------------------------------- [TA][CT][CG][AG]TTTG[TC]C[AC]AGA[CG]A -------------------------------------------------------------------------------- Time 51.70 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 17238 1.36e-01 112_[+1(3.35e-05)]_17_\ [+1(7.04e-05)]_347 24838 4.54e-02 353_[+2(9.04e-05)]_135 42990 9.21e-02 243_[+1(3.65e-05)]_245 43071 2.93e-02 125_[+1(9.69e-06)]_78_\ [+1(2.43e-05)]_273 54612 2.53e-08 3_[+3(1.86e-07)]_201_[+2(8.61e-07)]_\ 189_[+1(4.66e-06)]_34_[+2(9.27e-05)]_21 21006 1.30e-01 500 47005 6.10e-05 190_[+1(3.65e-05)]_134_\ [+2(1.32e-06)]_124_[+3(9.34e-05)]_12 47883 6.36e-01 500 54826 9.70e-06 165_[+1(4.35e-05)]_255_\ [+1(4.66e-06)]_18_[+1(5.38e-05)]_10_[+3(2.67e-07)] 29260 3.96e-01 500 48167 1.66e-06 92_[+3(6.43e-09)]_121_\ [+1(1.49e-05)]_259 48620 9.48e-04 135_[+3(3.12e-07)]_349 48625 3.48e-03 164_[+1(1.25e-05)]_324 18067 6.00e-02 332_[+1(2.75e-05)]_156 43406 8.02e-01 500 43545 2.74e-06 145_[+1(1.26e-07)]_31_\ [+2(5.63e-07)]_300 16445 2.87e-01 500 16599 1.24e-01 322_[+1(3.35e-05)]_166 50201 3.34e-04 205_[+1(4.05e-07)]_252_\ [+2(9.94e-05)]_19 31133 3.19e-05 297_[+1(8.19e-06)]_148_\ [+1(6.73e-08)]_31 43905 5.57e-03 409_[+1(1.34e-06)]_79 44023 1.45e-04 1_[+2(7.94e-05)]_340_[+3(1.12e-06)]_\ 131 44181 2.12e-07 182_[+2(3.24e-07)]_155_\ [+3(1.37e-08)]_135 50470 1.29e-02 132_[+1(2.95e-06)]_356 44609 7.89e-06 58_[+3(1.01e-07)]_377_\ [+1(2.95e-05)]_37 44776 1.69e-05 143_[+3(7.85e-05)]_86_\ [+1(2.95e-05)]_74_[+2(4.48e-07)]_157 50836 3.09e-01 284_[+2(9.72e-05)]_204 44902 5.61e-02 185_[+1(3.11e-05)]_303 45350 6.58e-03 148_[+1(1.94e-06)]_340 19937 4.14e-03 199_[+1(6.57e-06)]_289 20445 3.45e-04 111_[+1(4.05e-07)]_98_\ [+1(2.95e-06)]_267 46187 5.78e-01 500 36168 2.21e-06 264_[+2(9.76e-07)]_12_\ [+1(1.26e-07)]_200 46248 7.86e-06 220_[+1(1.77e-05)]_52_\ [+2(1.33e-07)]_204 42818 7.89e-02 216_[+1(2.43e-05)]_272 43516 2.26e-03 197_[+1(7.92e-07)]_291 47473 6.07e-02 131_[+1(5.15e-05)]_357 44743 1.55e-03 434_[+1(2.70e-07)]_54 35974 2.20e-02 432_[+1(1.77e-05)]_56 43454 8.01e-06 37_[+1(2.56e-05)]_159_\ [+3(5.31e-08)]_153_[+1(6.11e-05)]_111 48497 1.73e-01 500 37927 7.20e-01 500 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because nmotifs = 3 reached. ******************************************************************************** CPU: seaotter.hsd1.wa.comcast.net ********************************************************************************