******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.10.0 (Release date: Wed May 21 10:35:36 2014 +1000) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net. This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme.nbcr.net. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= motifs/192/192.seqs.fa ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ 9123 1.0000 500 32083 1.0000 500 5928 1.0000 500 36398 1.0000 500 46618 1.0000 500 46922 1.0000 500 37086 1.0000 500 14301 1.0000 500 14887 1.0000 500 29793 1.0000 500 48794 1.0000 500 9832 1.0000 500 9724 1.0000 500 50081 1.0000 500 54168 1.0000 500 33827 1.0000 500 44596 1.0000 500 44888 1.0000 500 45343 1.0000 500 12174 1.0000 500 12538 1.0000 500 36394 1.0000 500 47229 1.0000 500 45875 1.0000 500 47657 1.0000 500 47932 1.0000 500 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme motifs/192/192.seqs.fa -oc motifs/192 -dna -minw 12 -maxw 21 -nmotifs 3 -maxsize 500000 model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 12 maxw= 21 minic= 0.00 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 26 wnsites= 0.8 theta: prob= 1 spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 13000 N= 26 strands: + sample: seed= 0 seqfrac= 1 Letter frequencies in dataset: A 0.263 C 0.242 G 0.234 T 0.260 Background letter frequencies (from dataset with add-one prior applied): A 0.263 C 0.242 G 0.234 T 0.260 ******************************************************************************** ******************************************************************************** MOTIF 1 MEME width = 12 sites = 18 llr = 176 E-value = 1.1e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif 1 Description -------------------------------------------------------------------------------- Simplified A 281::8:82::8 pos.-specific C 6:313:a:::42 probability G :::27:::7:6: matrix T 2267:2:21a:: bits 2.1 * 1.9 * * 1.7 * * 1.5 * * Relative 1.3 * **** * * Entropy 1.0 * **** *** (14.1 bits) 0.8 *********** 0.6 ************ 0.4 ************ 0.2 ************ 0.0 ------------ Multilevel CATTGACAGTGA consensus ATC C TA CC sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------ 48794 132 1.87e-07 TATTGTGTGT CATTGACAGTCA CGACATTTAG 37086 266 1.87e-07 CTGCAGACCT CACTGACAGTGA GCACGGGAAC 44888 70 3.89e-07 GTATGGTTGG TATTGACAGTGA AAAGCCTCTT 36394 460 7.03e-07 GATCTTGTCT CATTGACTGTGA AAGACTGATT 29793 40 3.28e-06 GACCTTTCTC TATTGACAATGA TTGTGCGTCA 50081 391 4.68e-06 GTGTGTACGT AATTCACAGTCA CTCCCCACCC 47932 332 6.82e-06 AGCTGACTAG TACTGACTGTGA TGTACAACTT 47657 359 9.03e-06 TCCCTTTGGC TACTCACAGTCA GACCTTTACA 33827 440 1.93e-05 CTGACTTTGT CACGGACAATCA ATTCATCTTT 44596 451 2.06e-05 TAACATAAAT CACTGTCAGTCC TCCTGTTTGG 54168 20 2.52e-05 CAGTCTAGAT AATCGACAGTGC TGATAAGCAA 46618 483 2.52e-05 CTTTGTGTCA CTTTCACTGTCA CAGTCA 36398 344 2.73e-05 CCAAGAATAT CATGCACAGTCC ACTAACAAAA 45343 448 3.13e-05 GTGTGTGACA CTTTGACATTGC AGTTAAGTCG 47229 441 3.63e-05 GCTAGCAATC CTCGGACTGTGA AACACCATAC 32083 220 6.65e-05 TGCCAGAACT CAATGTCAATGA AAAACTGCAA 14887 410 7.03e-05 ACAATATCGG ATTCGACAATGA AGGCGTTATG 5928 20 7.35e-05 ATTTACAAGA AATTCTCATTGA CGAATGCCGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 48794 1.9e-07 131_[+1]_357 37086 1.9e-07 265_[+1]_223 44888 3.9e-07 69_[+1]_419 36394 7e-07 459_[+1]_29 29793 3.3e-06 39_[+1]_449 50081 4.7e-06 390_[+1]_98 47932 6.8e-06 331_[+1]_157 47657 9e-06 358_[+1]_130 33827 1.9e-05 439_[+1]_49 44596 2.1e-05 450_[+1]_38 54168 2.5e-05 19_[+1]_469 46618 2.5e-05 482_[+1]_6 36398 2.7e-05 343_[+1]_145 45343 3.1e-05 447_[+1]_41 47229 3.6e-05 440_[+1]_48 32083 6.6e-05 219_[+1]_269 14887 7e-05 409_[+1]_79 5928 7.3e-05 19_[+1]_469 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 1 width=12 seqs=18 48794 ( 132) CATTGACAGTCA 1 37086 ( 266) CACTGACAGTGA 1 44888 ( 70) TATTGACAGTGA 1 36394 ( 460) CATTGACTGTGA 1 29793 ( 40) TATTGACAATGA 1 50081 ( 391) AATTCACAGTCA 1 47932 ( 332) TACTGACTGTGA 1 47657 ( 359) TACTCACAGTCA 1 33827 ( 440) CACGGACAATCA 1 44596 ( 451) CACTGTCAGTCC 1 54168 ( 20) AATCGACAGTGC 1 46618 ( 483) CTTTCACTGTCA 1 36398 ( 344) CATGCACAGTCC 1 45343 ( 448) CTTTGACATTGC 1 47229 ( 441) CTCGGACTGTGA 1 32083 ( 220) CAATGTCAATGA 1 14887 ( 410) ATTCGACAATGA 1 5928 ( 20) AATTCTCATTGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 12714 bayes= 10.3111 E= 1.1e+001 -25 120 -1081 -23 156 -1081 -1081 -23 -224 46 -1081 123 -1081 -112 -49 147 -1081 20 163 -1081 166 -1081 -1081 -64 -1081 204 -1081 -1081 156 -1081 -1081 -23 -25 -1081 151 -123 -1081 -1081 -1081 194 -1081 68 138 -1081 156 -13 -1081 -1081 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 18 E= 1.1e+001 0.222222 0.555556 0.000000 0.222222 0.777778 0.000000 0.000000 0.222222 0.055556 0.333333 0.000000 0.611111 0.000000 0.111111 0.166667 0.722222 0.000000 0.277778 0.722222 0.000000 0.833333 0.000000 0.000000 0.166667 0.000000 1.000000 0.000000 0.000000 0.777778 0.000000 0.000000 0.222222 0.222222 0.000000 0.666667 0.111111 0.000000 0.000000 0.000000 1.000000 0.000000 0.388889 0.611111 0.000000 0.777778 0.222222 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 regular expression -------------------------------------------------------------------------------- [CAT][AT][TC]T[GC]AC[AT][GA]T[GC][AC] -------------------------------------------------------------------------------- Time 5.59 secs. ******************************************************************************** ******************************************************************************** MOTIF 2 MEME width = 16 sites = 18 llr = 190 E-value = 1.6e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif 2 Description -------------------------------------------------------------------------------- Simplified A :41:::::1:::::16 pos.-specific C 1222:724344:1a:: probability G 531:::322::84:93 matrix T 4168a36346624::1 bits 2.1 * 1.9 * * 1.7 * ** 1.5 * ** Relative 1.3 *** * ** Entropy 1.0 *** *** ** (15.2 bits) 0.8 * *** *** ** 0.6 * **** ******* 0.4 * ****** ******* 0.2 **************** 0.0 ---------------- Multilevel GATTTCTCTTTGGCGA consensus TGCC TGTCCCTT G sequence C GG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ---------------- 54168 247 2.91e-08 GCTCTCGAGG TGTTTCGCTTTGGCGA AGTCCAACCG 46618 23 9.51e-08 TTGGACGGCT TCTTTCTGTTTGGCGA GACTTTCGGT 50081 317 9.99e-07 CTCCGTCGAC TGTTTCTCTTTGTCAA GAGACGCCAT 12174 466 1.30e-06 CAGCTTGCGC GGTCTCTTCCTGTCGG TATTGATGAT 44888 388 2.11e-06 GGATCTACAC GCTCTTTCTCTGTCGA TCCCCAACTC 14887 441 2.38e-06 GAAATTGTTC GACTTTGGTTTGGCGA AACGGTTGAA 9724 432 2.67e-06 ATCGCAAAGC GAATTTTCGTTGTCGA GAACAACACA 9832 454 2.67e-06 AACTGGGTGG GGTTTTTGCCCGTCGG CATTGATACC 47657 32 3.32e-06 CGTCCGTAAG TATTTCTCGCCTGCGG ACTCGCACCT 36398 426 3.32e-06 ATATGCTTGC GACTTCCCATTGGCGA CATTAATACA 36394 272 1.02e-05 CACTTATTGT TGGTTCGCGCCGGCGA AATATTCCAG 44596 345 1.02e-05 ACAGTTAGAT TACCTTTCCTCGGCGG TACGGACATG 45343 295 1.51e-05 TACCTAGTAC CACTTCGTCTCGTCGA CGGCGGGAAA 47932 219 1.63e-05 ACCCGGTTCT TCTTTCCTTTTTCCGA AGCCTGTTGT 46922 36 2.14e-05 CTGTTCGAGA GGATTCTTGCCTTCGG GCGCGAAATA 29793 194 2.29e-05 ACCTTGTGGA TCTTTCGTTTTGGCAT TCTCACGGCG 14301 109 3.69e-05 AACACTGCGC GTTTTCTTCCTTCCGG ACAAAATCCG 32083 264 4.10e-05 TTTAAGGAAA GATCTCCGATCGTCGT CGACAGCCAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 54168 2.9e-08 246_[+2]_238 46618 9.5e-08 22_[+2]_462 50081 1e-06 316_[+2]_168 12174 1.3e-06 465_[+2]_19 44888 2.1e-06 387_[+2]_97 14887 2.4e-06 440_[+2]_44 9724 2.7e-06 431_[+2]_53 9832 2.7e-06 453_[+2]_31 47657 3.3e-06 31_[+2]_453 36398 3.3e-06 425_[+2]_59 36394 1e-05 271_[+2]_213 44596 1e-05 344_[+2]_140 45343 1.5e-05 294_[+2]_190 47932 1.6e-05 218_[+2]_266 46922 2.1e-05 35_[+2]_449 29793 2.3e-05 193_[+2]_291 14301 3.7e-05 108_[+2]_376 32083 4.1e-05 263_[+2]_221 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 2 width=16 seqs=18 54168 ( 247) TGTTTCGCTTTGGCGA 1 46618 ( 23) TCTTTCTGTTTGGCGA 1 50081 ( 317) TGTTTCTCTTTGTCAA 1 12174 ( 466) GGTCTCTTCCTGTCGG 1 44888 ( 388) GCTCTTTCTCTGTCGA 1 14887 ( 441) GACTTTGGTTTGGCGA 1 9724 ( 432) GAATTTTCGTTGTCGA 1 9832 ( 454) GGTTTTTGCCCGTCGG 1 47657 ( 32) TATTTCTCGCCTGCGG 1 36398 ( 426) GACTTCCCATTGGCGA 1 36394 ( 272) TGGTTCGCGCCGGCGA 1 44596 ( 345) TACCTTTCCTCGGCGG 1 45343 ( 295) CACTTCGTCTCGTCGA 1 47932 ( 219) TCTTTCCTTTTTCCGA 1 46922 ( 36) GGATTCTTGCCTTCGG 1 29793 ( 194) TCTTTCGTTTTGGCAT 1 14301 ( 109) GTTTTCTTCCTTCCGG 1 32083 ( 264) GATCTCCGATCGTCGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 12610 bayes= 10.2992 E= 1.6e+002 -1081 -212 109 77 56 -13 51 -222 -124 -13 -207 123 -1081 -13 -1081 158 -1081 -1081 -1081 194 -1081 157 -1081 9 -1081 -54 25 109 -1081 87 -7 36 -124 20 -7 58 -1081 68 -1081 123 -1081 68 -1081 123 -1081 -1081 173 -23 -1081 -112 93 77 -1081 204 -1081 -1081 -124 -1081 192 -1081 108 -1081 51 -123 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 18 E= 1.6e+002 0.000000 0.055556 0.500000 0.444444 0.388889 0.222222 0.333333 0.055556 0.111111 0.222222 0.055556 0.611111 0.000000 0.222222 0.000000 0.777778 0.000000 0.000000 0.000000 1.000000 0.000000 0.722222 0.000000 0.277778 0.000000 0.166667 0.277778 0.555556 0.000000 0.444444 0.222222 0.333333 0.111111 0.277778 0.222222 0.388889 0.000000 0.388889 0.000000 0.611111 0.000000 0.388889 0.000000 0.611111 0.000000 0.000000 0.777778 0.222222 0.000000 0.111111 0.444444 0.444444 0.000000 1.000000 0.000000 0.000000 0.111111 0.000000 0.888889 0.000000 0.555556 0.000000 0.333333 0.111111 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 regular expression -------------------------------------------------------------------------------- [GT][AGC][TC][TC]T[CT][TG][CTG][TCG][TC][TC][GT][GT]CG[AG] -------------------------------------------------------------------------------- Time 11.08 secs. ******************************************************************************** ******************************************************************************** MOTIF 3 MEME width = 21 sites = 6 llr = 108 E-value = 6.0e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif 3 Description -------------------------------------------------------------------------------- Simplified A :::::::2:2::22:3:2:3: pos.-specific C :2:8:22::322::7::::7a probability G :8::a::8:2238222832:: matrix T a:a2:88:a375:725258:: bits 2.1 * * 1.9 * * * * * 1.7 * * * * * 1.5 ***** ** * * * Relative 1.3 ********* * * * * Entropy 1.0 ********* * * *** (26.0 bits) 0.8 ********* * * * * *** 0.6 ********* ***** ***** 0.4 ********* *********** 0.2 ********* *********** 0.0 --------------------- Multilevel TGTCGTTGTCTTGTCTGTTCC consensus T G A G A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------------- 36398 315 3.53e-11 CCCAAAACCA TGTCGTCGTTTTGTCTGGTCC AAGAATATCA 45875 291 1.11e-09 TTTTGAATAA TGTCGTTGTCTGATCATTTCC TATGCTGACC 14301 139 1.93e-09 AATCCGTGGT TGTCGTTGTATCGGCAGATCC TTGCGCGTGC 32083 71 6.93e-09 TATTTGTGCT TGTTGCTGTCCTGTTTGTTCC AAAAAAAGTT 50081 185 8.50e-09 GACGGGCGTC TCTCGTTGTGTGGACGGGTAC AGGTACAGAC 45343 426 1.36e-08 CGGATATTGC TGTCGTTATTGTGTGTGTGAC ACTTTGACAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 36398 3.5e-11 314_[+3]_165 45875 1.1e-09 290_[+3]_189 14301 1.9e-09 138_[+3]_341 32083 6.9e-09 70_[+3]_409 50081 8.5e-09 184_[+3]_295 45343 1.4e-08 425_[+3]_54 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 3 width=21 seqs=6 36398 ( 315) TGTCGTCGTTTTGTCTGGTCC 1 45875 ( 291) TGTCGTTGTCTGATCATTTCC 1 14301 ( 139) TGTCGTTGTATCGGCAGATCC 1 32083 ( 71) TGTTGCTGTCCTGTTTGTTCC 1 50081 ( 185) TCTCGTTGTGTGGACGGGTAC 1 45343 ( 426) TGTCGTTATTGTGTGTGTGAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 12480 bayes= 11.4693 E= 6.0e+002 -923 -923 -923 194 -923 -54 183 -923 -923 -923 -923 194 -923 178 -923 -64 -923 -923 209 -923 -923 -54 -923 168 -923 -54 -923 168 -66 -923 183 -923 -923 -923 -923 194 -66 46 -49 36 -923 -54 -49 136 -923 -54 51 94 -66 -923 183 -923 -66 -923 -49 136 -923 146 -49 -64 34 -923 -49 94 -923 -923 183 -64 -66 -923 51 94 -923 -923 -49 168 34 146 -923 -923 -923 204 -923 -923 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 6 E= 6.0e+002 0.000000 0.000000 0.000000 1.000000 0.000000 0.166667 0.833333 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.833333 0.000000 0.166667 0.000000 0.000000 1.000000 0.000000 0.000000 0.166667 0.000000 0.833333 0.000000 0.166667 0.000000 0.833333 0.166667 0.000000 0.833333 0.000000 0.000000 0.000000 0.000000 1.000000 0.166667 0.333333 0.166667 0.333333 0.000000 0.166667 0.166667 0.666667 0.000000 0.166667 0.333333 0.500000 0.166667 0.000000 0.833333 0.000000 0.166667 0.000000 0.166667 0.666667 0.000000 0.666667 0.166667 0.166667 0.333333 0.000000 0.166667 0.500000 0.000000 0.000000 0.833333 0.166667 0.166667 0.000000 0.333333 0.500000 0.000000 0.000000 0.166667 0.833333 0.333333 0.666667 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 regular expression -------------------------------------------------------------------------------- TGTCGTTGT[CT]T[TG]GTC[TA]G[TG]T[CA]C -------------------------------------------------------------------------------- Time 16.56 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 9123 9.30e-01 500 32083 4.62e-07 70_[+3(6.93e-09)]_128_\ [+1(6.65e-05)]_32_[+2(4.10e-05)]_221 5928 1.77e-01 19_[+1(7.35e-05)]_469 36398 1.59e-10 314_[+3(3.53e-11)]_8_[+1(2.73e-05)]_\ 70_[+2(3.32e-06)]_59 46618 1.69e-05 22_[+2(9.51e-08)]_444_\ [+1(2.52e-05)]_6 46922 8.00e-02 35_[+2(2.14e-05)]_449 37086 1.54e-03 265_[+1(1.87e-07)]_223 14301 2.84e-06 108_[+2(3.69e-05)]_14_\ [+3(1.93e-09)]_341 14887 9.06e-04 409_[+1(7.03e-05)]_19_\ [+2(2.38e-06)]_44 29793 1.50e-04 39_[+1(3.28e-06)]_142_\ [+2(2.29e-05)]_291 48794 9.18e-04 131_[+1(1.87e-07)]_196_\ [+1(5.16e-05)]_149 9832 7.63e-03 453_[+2(2.67e-06)]_31 9724 1.15e-02 431_[+2(2.67e-06)]_53 50081 1.66e-09 184_[+3(8.50e-09)]_111_\ [+2(9.99e-07)]_58_[+1(4.68e-06)]_98 54168 5.48e-06 19_[+1(2.52e-05)]_215_\ [+2(2.91e-08)]_238 33827 6.54e-03 315_[+1(5.16e-05)]_112_\ [+1(1.93e-05)]_49 44596 2.40e-03 344_[+2(1.02e-05)]_90_\ [+1(2.06e-05)]_38 44888 4.48e-06 69_[+1(3.89e-07)]_306_\ [+2(2.11e-06)]_97 45343 1.77e-07 294_[+2(1.51e-05)]_115_\ [+3(1.36e-08)]_1_[+1(3.13e-05)]_41 12174 8.48e-03 465_[+2(1.30e-06)]_19 12538 3.97e-01 500 36394 3.73e-05 271_[+2(1.02e-05)]_172_\ [+1(7.03e-07)]_29 47229 1.63e-01 440_[+1(3.63e-05)]_48 45875 1.94e-05 290_[+3(1.11e-09)]_189 47657 2.94e-04 31_[+2(3.32e-06)]_311_\ [+1(9.03e-06)]_130 47932 8.29e-06 218_[+2(1.63e-05)]_97_\ [+1(6.82e-06)]_95_[+3(4.17e-06)]_41 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because nmotifs = 3 reached. ******************************************************************************** CPU: seaotter.hsd1.wa.comcast.net ********************************************************************************