******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.10.0 (Release date: Wed May 21 10:35:36 2014 +1000) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net. This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme.nbcr.net. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= motifs/200/200.seqs.fa ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ 17304 1.0000 500 31981 1.0000 500 42926 1.0000 500 9161 1.0000 500 17772 1.0000 500 20773 1.0000 500 46837 1.0000 500 14032 1.0000 500 47446 1.0000 500 47526 1.0000 500 28984 1.0000 500 47947 1.0000 500 7346 1.0000 500 15032 1.0000 500 43574 1.0000 500 51570 1.0000 500 25549 1.0000 500 30365 1.0000 500 16141 1.0000 500 50135 1.0000 500 30965 1.0000 500 16688 1.0000 500 10544 1.0000 500 10251 1.0000 500 10310 1.0000 500 1840 1.0000 500 10768 1.0000 500 33896 1.0000 500 11653 1.0000 500 45520 1.0000 500 51897 1.0000 500 45828 1.0000 500 35810 1.0000 500 12896 1.0000 500 44643 1.0000 500 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme motifs/200/200.seqs.fa -oc motifs/200 -dna -minw 12 -maxw 21 -nmotifs 3 -maxsize 500000 model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 12 maxw= 21 minic= 0.00 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 35 wnsites= 0.8 theta: prob= 1 spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 17500 N= 35 strands: + sample: seed= 0 seqfrac= 1 Letter frequencies in dataset: A 0.263 C 0.249 G 0.228 T 0.260 Background letter frequencies (from dataset with add-one prior applied): A 0.263 C 0.249 G 0.228 T 0.260 ******************************************************************************** ******************************************************************************** MOTIF 1 MEME width = 16 sites = 22 llr = 234 E-value = 8.1e-003 ******************************************************************************** -------------------------------------------------------------------------------- Motif 1 Description -------------------------------------------------------------------------------- Simplified A ::::::2::2::2423 pos.-specific C 5:195::a5:483:55 probability G 4a:::9:::6:231:2 matrix T 1:91518:525:253: bits 2.1 * 1.9 * 1.7 * * 1.5 * * * * Relative 1.3 *** * * * Entropy 1.1 *** **** * (15.3 bits) 0.9 ******** * 0.6 *********** * 0.4 ************ *** 0.2 ************ *** 0.0 ---------------- Multilevel CGTCCGTCCGTCGTCC consensus G T TACGCATA sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ---------------- 47947 121 2.42e-07 TGCAGGCGAT CGTCCGTCCGCCCGTC CGCTCGTTCG 15032 29 3.24e-07 GATTTTTGGG CGTCTGTCCATCGTCG AGCGATGGTT 11653 16 3.78e-07 TCCTTCAACC GGTCTGTCTGTCTATA CGTCATCGAA 28984 321 3.78e-07 AAGCCAACTG GGTCTGACCGTCCTTC TCTAAACACT 7346 306 4.35e-07 GTTTCCGTTG CGTCTGTCTGCGTACC GTTTATGTTC 35810 316 6.52e-07 CGCTGGGAGG GGTCCTTCCGTCGTCA CCCTACGAGT 45520 350 1.22e-06 TCCGGCGGCT AGTCTGTCTGTCTTCC GTTTCGATAC 12896 196 1.91e-06 CCAAGAAAAG GGTCCGTCCGCCGCAC GACCCGGTAT 43574 219 2.13e-06 CCATCGTCGC CGTCCGTCCTCGTTTC GATCGCTTCC 25549 438 4.76e-06 CAGTTGGATT CGTTCGTCTACCCATC GTCTCATCAC 17772 376 4.76e-06 TCAAATAGAG TGTCTGTCCTTCGAAC GTCAATCAAT 44643 295 5.23e-06 CCGTTTTTCC TGTCCGTCTGCGCTCG TTTAGGCGGC 45828 336 5.73e-06 TCTATTTTCA GGCCCGACCGCCAACC GCTCGATCAT 50135 251 6.26e-06 CTACACTCTC CGTCTGACCTTCGTAA TCCACAGAGA 14032 309 1.05e-05 AGACGATGAG GGTCCGGCCATCGACG ACTCGCACAA 10310 406 1.23e-05 ACAATGACTT GGCCTTTCTGTCCACA TTGTAAATCC 17304 464 1.23e-05 ATCAAACGCA CGTTTGTCCATCTTAA ATCCTAATTG 47526 250 1.43e-05 GTGTCTCCCC CGCCCGTCTGGCATTC CTACGGCCGA 1840 302 1.92e-05 TTGCCCAATT GGTCCGACCACGAACG TTGCAAATGT 33896 425 2.21e-05 ACAGATAATT GGTCCTTCTTCGCGCC ACGTCCAGGC 46837 321 2.37e-05 CCGCATTTTT CGTCAGTCTGACATTC CGTCTTTTTC 31981 348 4.48e-05 CTCATGTTTC CGTTTGTTTGTCGGCA AGGTGGACAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 47947 2.4e-07 120_[+1]_364 15032 3.2e-07 28_[+1]_456 11653 3.8e-07 15_[+1]_469 28984 3.8e-07 320_[+1]_164 7346 4.4e-07 305_[+1]_179 35810 6.5e-07 315_[+1]_169 45520 1.2e-06 349_[+1]_135 12896 1.9e-06 195_[+1]_289 43574 2.1e-06 218_[+1]_266 25549 4.8e-06 437_[+1]_47 17772 4.8e-06 375_[+1]_109 44643 5.2e-06 294_[+1]_190 45828 5.7e-06 335_[+1]_149 50135 6.3e-06 250_[+1]_234 14032 1e-05 308_[+1]_176 10310 1.2e-05 405_[+1]_79 17304 1.2e-05 463_[+1]_21 47526 1.4e-05 249_[+1]_235 1840 1.9e-05 301_[+1]_183 33896 2.2e-05 424_[+1]_60 46837 2.4e-05 320_[+1]_164 31981 4.5e-05 347_[+1]_137 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 1 width=16 seqs=22 47947 ( 121) CGTCCGTCCGCCCGTC 1 15032 ( 29) CGTCTGTCCATCGTCG 1 11653 ( 16) GGTCTGTCTGTCTATA 1 28984 ( 321) GGTCTGACCGTCCTTC 1 7346 ( 306) CGTCTGTCTGCGTACC 1 35810 ( 316) GGTCCTTCCGTCGTCA 1 45520 ( 350) AGTCTGTCTGTCTTCC 1 12896 ( 196) GGTCCGTCCGCCGCAC 1 43574 ( 219) CGTCCGTCCTCGTTTC 1 25549 ( 438) CGTTCGTCTACCCATC 1 17772 ( 376) TGTCTGTCCTTCGAAC 1 44643 ( 295) TGTCCGTCTGCGCTCG 1 45828 ( 336) GGCCCGACCGCCAACC 1 50135 ( 251) CGTCTGACCTTCGTAA 1 14032 ( 309) GGTCCGGCCATCGACG 1 10310 ( 406) GGCCTTTCTGTCCACA 1 17304 ( 464) CGTTTGTCCATCTTAA 1 47526 ( 250) CGCCCGTCTGGCATTC 1 1840 ( 302) GGTCCGACCACGAACG 1 33896 ( 425) GGTCCTTCTTCGCGCC 1 46837 ( 321) CGTCAGTCTGACATTC 1 31981 ( 348) CGTTTGTTTGTCGGCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 16975 bayes= 9.94532 E= 8.1e-003 -253 87 84 -151 -1110 -1110 213 -1110 -1110 -87 -1110 173 -1110 179 -1110 -93 -253 100 -1110 81 -1110 -1110 192 -93 -53 -1110 -232 157 -1110 194 -1110 -251 -1110 113 -1110 81 -21 -1110 137 -52 -253 71 -232 94 -1110 163 -1 -1110 -53 13 48 -19 47 -245 -74 81 -53 100 -1110 29 5 113 -33 -1110 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 22 E= 8.1e-003 0.045455 0.454545 0.409091 0.090909 0.000000 0.000000 1.000000 0.000000 0.000000 0.136364 0.000000 0.863636 0.000000 0.863636 0.000000 0.136364 0.045455 0.500000 0.000000 0.454545 0.000000 0.000000 0.863636 0.136364 0.181818 0.000000 0.045455 0.772727 0.000000 0.954545 0.000000 0.045455 0.000000 0.545455 0.000000 0.454545 0.227273 0.000000 0.590909 0.181818 0.045455 0.409091 0.045455 0.500000 0.000000 0.772727 0.227273 0.000000 0.181818 0.272727 0.318182 0.227273 0.363636 0.045455 0.136364 0.454545 0.181818 0.500000 0.000000 0.318182 0.272727 0.545455 0.181818 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 regular expression -------------------------------------------------------------------------------- [CG]GTC[CT]GTC[CT][GA][TC][CG][GCT][TA][CT][CA] -------------------------------------------------------------------------------- Time 10.80 secs. ******************************************************************************** ******************************************************************************** MOTIF 2 MEME width = 21 sites = 8 llr = 137 E-value = 3.7e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif 2 Description -------------------------------------------------------------------------------- Simplified A :::::3a5:6951:316:8:a pos.-specific C a:138::394::6a::15:a: probability G :1:335::1::4::3911::: matrix T :995:3:3::113:5:143:: bits 2.1 1.9 * * * ** 1.7 * * * ** 1.5 *** * * * * * ** Relative 1.3 *** * * * * * * ** Entropy 1.1 *** * * *** * * *** (24.7 bits) 0.9 *** * * *** * * *** 0.6 *** *** ****** * **** 0.4 ********************* 0.2 ********************* 0.0 --------------------- Multilevel CTTTCGAACAAACCTGACACA consensus CGA C C GT A TT sequence G T T G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------------- 47526 15 1.01e-09 ATTGGTAGCC CGTTCTACCAAACCTGACACA AACAGTGAGC 10251 95 1.77e-09 CTTTACAAAT CTTGCGAACAAAACTGTCACA ACTGCCTGCT 20773 416 3.25e-09 TACCTCTCTG CTTCCAAAGAAACCGGATACA TCTAGGATTG 45828 363 3.58e-09 CTCGATCATG CTTTGGAACCAGCCAAACACA AAAACGCGCC 9161 454 4.74e-09 GAGCAAGCTC CTTGGGATCCAACCTGGTACA ACTTGGCGGA 30965 345 6.75e-09 TCACTTTCTT CTTTCAAACATTCCAGACACA ATGGTAGCCC 16688 12 1.10e-08 AGGGTCTAAT CTTTCGATCCAGTCTGCTTCA GCTAGATGCC 42926 15 9.20e-08 CCATCGAATA CTCCCTACCAAGTCGGAGTCA ACCGAATGTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 47526 1e-09 14_[+2]_465 10251 1.8e-09 94_[+2]_385 20773 3.3e-09 415_[+2]_64 45828 3.6e-09 362_[+2]_117 9161 4.7e-09 453_[+2]_26 30965 6.7e-09 344_[+2]_135 16688 1.1e-08 11_[+2]_468 42926 9.2e-08 14_[+2]_465 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 2 width=21 seqs=8 47526 ( 15) CGTTCTACCAAACCTGACACA 1 10251 ( 95) CTTGCGAACAAAACTGTCACA 1 20773 ( 416) CTTCCAAAGAAACCGGATACA 1 45828 ( 363) CTTTGGAACCAGCCAAACACA 1 9161 ( 454) CTTGGGATCCAACCTGGTACA 1 30965 ( 345) CTTTCAAACATTCCAGACACA 1 16688 ( 12) CTTTCGATCCAGTCTGCTTCA 1 42926 ( 15) CTCCCTACCAAGTCGGAGTCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 16800 bayes= 11.0355 E= 3.7e+001 -965 200 -965 -965 -965 -965 -87 175 -965 -99 -965 175 -965 0 13 94 -965 159 13 -965 -7 -965 113 -6 193 -965 -965 -965 93 0 -965 -6 -965 181 -87 -965 125 59 -965 -965 174 -965 -965 -105 93 -965 72 -105 -107 132 -965 -6 -965 200 -965 -965 -7 -965 13 94 -107 -965 194 -965 125 -99 -87 -105 -965 100 -87 53 151 -965 -965 -6 -965 200 -965 -965 193 -965 -965 -965 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 8 E= 3.7e+001 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.125000 0.875000 0.000000 0.125000 0.000000 0.875000 0.000000 0.250000 0.250000 0.500000 0.000000 0.750000 0.250000 0.000000 0.250000 0.000000 0.500000 0.250000 1.000000 0.000000 0.000000 0.000000 0.500000 0.250000 0.000000 0.250000 0.000000 0.875000 0.125000 0.000000 0.625000 0.375000 0.000000 0.000000 0.875000 0.000000 0.000000 0.125000 0.500000 0.000000 0.375000 0.125000 0.125000 0.625000 0.000000 0.250000 0.000000 1.000000 0.000000 0.000000 0.250000 0.000000 0.250000 0.500000 0.125000 0.000000 0.875000 0.000000 0.625000 0.125000 0.125000 0.125000 0.000000 0.500000 0.125000 0.375000 0.750000 0.000000 0.000000 0.250000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 regular expression -------------------------------------------------------------------------------- CTT[TCG][CG][GAT]A[ACT]C[AC]A[AG][CT]C[TAG]GA[CT][AT]CA -------------------------------------------------------------------------------- Time 21.21 secs. ******************************************************************************** ******************************************************************************** MOTIF 3 MEME width = 12 sites = 13 llr = 144 E-value = 1.4e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif 3 Description -------------------------------------------------------------------------------- Simplified A 78::a8::a995 pos.-specific C 1:97::82::12 probability G 22:3::27:1:2 matrix T ::1::2:1:::: bits 2.1 1.9 * * 1.7 * * * 1.5 * * * *** Relative 1.3 ** * * *** Entropy 1.1 ****** *** (15.9 bits) 0.9 *********** 0.6 ************ 0.4 ************ 0.2 ************ 0.0 ------------ Multilevel AACCAACGAAAA consensus G G T C C sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------ 43574 413 8.06e-08 AAACCATCGA AACCAACGAAAA ATCGACGCCA 45520 241 8.79e-07 AACAAAAGAA GACGAACGAAAA GCTACTGACA 47526 289 1.30e-06 GATAGCTCGG AACCATCGAAAG AAACTGTGTC 47446 401 1.30e-06 CGTGCTTTTG AACCATCGAAAG TTCTTTGGCA 1840 350 2.66e-06 GTTTGTTACT GGCCAACGAAAA TGAGTTTGTA 20773 294 3.15e-06 CCGACGACAC AACGAACCAAAC ACCCCAAGTA 42926 344 3.15e-06 GTCAATTTCC AGCCATCGAAAA TTTGTACGAT 45828 417 4.46e-06 GGTTCGTTCC AACGAACGAACA CTGGTCTTCC 44643 460 4.88e-06 CATTTCAGAA AACCAACTAAAC GTCAATTCCG 16688 221 5.65e-06 AGGTCAAAGT CACCAACCAAAA CGTAACGTTG 51570 149 7.70e-06 GGAATGAGAA AACCAAGCAAAC CTCTCGTTAC 17772 63 1.14e-05 TTCTTGTCAA AATCAAGGAAAA CTTCGTCAAG 10544 27 1.89e-05 CCAAACGAGA GACGAACGAGAG GACGTCGAGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 43574 8.1e-08 412_[+3]_76 45520 8.8e-07 240_[+3]_248 47526 1.3e-06 288_[+3]_200 47446 1.3e-06 400_[+3]_88 1840 2.7e-06 349_[+3]_139 20773 3.2e-06 293_[+3]_195 42926 3.2e-06 343_[+3]_145 45828 4.5e-06 416_[+3]_72 44643 4.9e-06 459_[+3]_29 16688 5.7e-06 220_[+3]_268 51570 7.7e-06 148_[+3]_340 17772 1.1e-05 62_[+3]_426 10544 1.9e-05 26_[+3]_462 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 3 width=12 seqs=13 43574 ( 413) AACCAACGAAAA 1 45520 ( 241) GACGAACGAAAA 1 47526 ( 289) AACCATCGAAAG 1 47446 ( 401) AACCATCGAAAG 1 1840 ( 350) GGCCAACGAAAA 1 20773 ( 294) AACGAACCAAAC 1 42926 ( 344) AGCCATCGAAAA 1 45828 ( 417) AACGAACGAACA 1 44643 ( 460) AACCAACTAAAC 1 16688 ( 221) CACCAACCAAAA 1 51570 ( 149) AACCAAGCAAAC 1 17772 ( 63) AATCAAGGAAAA 1 10544 ( 27) GACGAACGAGAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 17115 bayes= 10.1168 E= 1.4e+003 140 -169 2 -1035 169 -1035 -57 -1035 -1035 189 -1035 -175 -1035 147 43 -1035 193 -1035 -1035 -1035 155 -1035 -1035 -17 -1035 176 -57 -1035 -1035 -11 160 -175 193 -1035 -1035 -1035 181 -1035 -157 -1035 181 -169 -1035 -1035 104 -11 2 -1035 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 13 E= 1.4e+003 0.692308 0.076923 0.230769 0.000000 0.846154 0.000000 0.153846 0.000000 0.000000 0.923077 0.000000 0.076923 0.000000 0.692308 0.307692 0.000000 1.000000 0.000000 0.000000 0.000000 0.769231 0.000000 0.000000 0.230769 0.000000 0.846154 0.153846 0.000000 0.000000 0.230769 0.692308 0.076923 1.000000 0.000000 0.000000 0.000000 0.923077 0.000000 0.076923 0.000000 0.923077 0.076923 0.000000 0.000000 0.538462 0.230769 0.230769 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 regular expression -------------------------------------------------------------------------------- [AG]AC[CG]A[AT]C[GC]AAA[ACG] -------------------------------------------------------------------------------- Time 30.97 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 17304 7.92e-02 463_[+1(1.23e-05)]_21 31981 1.18e-01 347_[+1(4.48e-05)]_137 42926 1.13e-06 14_[+2(9.20e-08)]_308_\ [+3(3.15e-06)]_145 9161 1.86e-05 453_[+2(4.74e-09)]_26 17772 7.45e-04 62_[+3(1.14e-05)]_301_\ [+1(4.76e-06)]_109 20773 4.53e-07 293_[+3(3.15e-06)]_110_\ [+2(3.25e-09)]_64 46837 3.85e-02 320_[+1(2.37e-05)]_164 14032 3.51e-03 290_[+3(6.02e-05)]_6_[+1(1.05e-05)]_\ 56_[+3(9.27e-05)]_18_[+3(4.10e-05)]_39_[+3(5.83e-05)]_27 47446 8.31e-03 400_[+3(1.30e-06)]_88 47526 8.30e-10 14_[+2(1.01e-09)]_214_\ [+1(1.43e-05)]_23_[+3(1.30e-06)]_200 28984 1.92e-03 320_[+1(3.78e-07)]_164 47947 4.94e-04 120_[+1(2.42e-07)]_364 7346 5.28e-03 305_[+1(4.35e-07)]_179 15032 5.96e-03 28_[+1(3.24e-07)]_456 43574 4.65e-06 218_[+1(2.13e-06)]_178_\ [+3(8.06e-08)]_76 51570 1.97e-02 148_[+3(7.70e-06)]_340 25549 1.43e-02 437_[+1(4.76e-06)]_47 30365 6.12e-01 500 16141 5.48e-01 500 50135 2.25e-02 250_[+1(6.26e-06)]_234 30965 1.13e-04 344_[+2(6.75e-09)]_135 16688 1.04e-06 11_[+2(1.10e-08)]_188_\ [+3(5.65e-06)]_268 10544 6.78e-02 26_[+3(1.89e-05)]_462 10251 7.65e-05 94_[+2(1.77e-09)]_385 10310 9.20e-03 247_[+1(8.55e-05)]_142_\ [+1(1.23e-05)]_79 1840 8.43e-04 14_[+1(3.97e-05)]_163_\ [+1(6.28e-05)]_92_[+1(1.92e-05)]_32_[+3(2.66e-06)]_139 10768 1.39e-01 295_[+3(7.79e-05)]_193 33896 9.68e-02 424_[+1(2.21e-05)]_60 11653 2.35e-03 15_[+1(3.78e-07)]_469 45520 2.02e-05 240_[+3(8.79e-07)]_51_\ [+1(1.79e-05)]_30_[+1(1.22e-06)]_135 51897 3.53e-02 426_[+3(9.53e-05)]_62 45828 3.60e-09 335_[+1(5.73e-06)]_11_\ [+2(3.58e-09)]_33_[+3(4.46e-06)]_72 35810 6.58e-03 59_[+1(3.74e-05)]_240_\ [+1(6.52e-07)]_169 12896 1.25e-02 195_[+1(1.91e-06)]_289 44643 1.70e-04 294_[+1(5.23e-06)]_149_\ [+3(4.88e-06)]_29 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because nmotifs = 3 reached. ******************************************************************************** CPU: seaotter.hsd1.wa.comcast.net ********************************************************************************