******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.10.0 (Release date: Wed May 21 10:35:36 2014 +1000) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net. This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme.nbcr.net. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= motifs/209/209.seqs.fa ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ 24408 1.0000 500 9168 1.0000 500 42844 1.0000 500 31987 1.0000 500 13123 1.0000 500 13428 1.0000 500 46782 1.0000 500 46848 1.0000 500 47198 1.0000 500 15481 1.0000 500 16787 1.0000 500 51301 1.0000 500 44443 1.0000 500 44449 1.0000 500 10835 1.0000 500 44687 1.0000 500 19579 1.0000 500 34984 1.0000 500 35057 1.0000 500 45855 1.0000 500 12679 1.0000 500 12779 1.0000 500 46130 1.0000 500 42626 1.0000 500 43763 1.0000 500 43501 1.0000 500 43705 1.0000 500 37253 1.0000 500 43575 1.0000 500 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme motifs/209/209.seqs.fa -oc motifs/209 -dna -minw 12 -maxw 21 -nmotifs 3 -maxsize 500000 model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 12 maxw= 21 minic= 0.00 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 29 wnsites= 0.8 theta: prob= 1 spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 14500 N= 29 strands: + sample: seed= 0 seqfrac= 1 Letter frequencies in dataset: A 0.273 C 0.243 G 0.229 T 0.254 Background letter frequencies (from dataset with add-one prior applied): A 0.273 C 0.243 G 0.229 T 0.254 ******************************************************************************** ******************************************************************************** MOTIF 1 MEME width = 12 sites = 19 llr = 206 E-value = 6.6e-009 ******************************************************************************** -------------------------------------------------------------------------------- Motif 1 Description -------------------------------------------------------------------------------- Simplified A 5:1:8:51::88 pos.-specific C 13:a19:::9:: probability G 111:1:19:122 matrix T 469::14:a:1: bits 2.1 * 1.9 * ** 1.7 * *** 1.5 ** * *** Relative 1.3 ** * *** * Entropy 1.1 **** ***** (15.7 bits) 0.8 **** ***** 0.6 *********** 0.4 ************ 0.2 ************ 0.0 ------------ Multilevel ATTCACAGTCAA consensus TC T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------ 46848 60 8.17e-08 GCATGCTCCT ATTCACAGTCAA ACCATTACAA 31987 290 8.17e-08 AGAGAGAGAC ATTCACAGTCAA GGGTGTTGTT 46782 356 3.82e-07 GTTCCACACC ACTCACAGTCAA CCTTGTCAAC 42844 446 3.82e-07 GAACAACCTA ACTCACAGTCAA TGCTCACAAC 16787 389 6.64e-07 CGGAATACCT ATTCACGGTCAA ATAACAGGAA 43763 274 1.85e-06 TGGGAGAACT TGTCACTGTCAA GAAGATTCAA 12779 40 1.85e-06 AGGACGGTAA TTTCACTGTCAG GGCAGAGACA 44687 226 2.31e-06 AACGAATTCG TCTCACAGTCGA TACCGGTAGG 24408 165 2.31e-06 TAATTGAATG ATTCATAGTCAA GAATTCCCGA 44443 351 3.44e-06 CGACGGCGAT TCTCGCAGTCAA CGAAAACGGT 45855 392 7.86e-06 GACCCTTTGT TTTCACTGTCGG TTGGTGCCTC 19579 328 7.86e-06 AAGAACAGCA CTTCACGGTCAA CGCTACTCTG 9168 406 8.64e-06 TGCCAGTGAG ACTCACAATCAA CCTCTCCTGC 44449 347 9.33e-06 CCGGCAGCTC TCTCACTGTCTA TGTCGTTTGC 43501 192 1.04e-05 TGTCCGGTCC GTTCACTGTCAG TTTTCCGTCA 35057 259 1.53e-05 AATATGCGAT ATTCCCTGTCGA GCACGAGCGC 37253 436 1.76e-05 AATCATTGAC AGTCACTGTGAA TTGCCAAGTG 13428 3 1.76e-05 TC ATGCGCAGTCAA CCGCCTCATG 47198 114 3.14e-05 ACAATCATCT TTACATAGTCAA AACCCTCTCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 46848 8.2e-08 59_[+1]_429 31987 8.2e-08 289_[+1]_199 46782 3.8e-07 355_[+1]_133 42844 3.8e-07 445_[+1]_43 16787 6.6e-07 388_[+1]_100 43763 1.8e-06 273_[+1]_215 12779 1.8e-06 39_[+1]_449 44687 2.3e-06 225_[+1]_263 24408 2.3e-06 164_[+1]_324 44443 3.4e-06 350_[+1]_138 45855 7.9e-06 391_[+1]_97 19579 7.9e-06 327_[+1]_161 9168 8.6e-06 405_[+1]_83 44449 9.3e-06 346_[+1]_142 43501 1e-05 191_[+1]_297 35057 1.5e-05 258_[+1]_230 37253 1.8e-05 435_[+1]_53 13428 1.8e-05 2_[+1]_486 47198 3.1e-05 113_[+1]_375 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 1 width=12 seqs=19 46848 ( 60) ATTCACAGTCAA 1 31987 ( 290) ATTCACAGTCAA 1 46782 ( 356) ACTCACAGTCAA 1 42844 ( 446) ACTCACAGTCAA 1 16787 ( 389) ATTCACGGTCAA 1 43763 ( 274) TGTCACTGTCAA 1 12779 ( 40) TTTCACTGTCAG 1 44687 ( 226) TCTCACAGTCGA 1 24408 ( 165) ATTCATAGTCAA 1 44443 ( 351) TCTCGCAGTCAA 1 45855 ( 392) TTTCACTGTCGG 1 19579 ( 328) CTTCACGGTCAA 1 9168 ( 406) ACTCACAATCAA 1 44449 ( 347) TCTCACTGTCTA 1 43501 ( 192) GTTCACTGTCAG 1 35057 ( 259) ATTCCCTGTCGA 1 37253 ( 436) AGTCACTGTGAA 1 13428 ( 3) ATGCGCAGTCAA 1 47198 ( 114) TTACATAGTCAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 14181 bayes= 10.9836 E= 6.6e-009 95 -221 -212 53 -1089 38 -112 119 -237 -1089 -212 181 -1089 204 -1089 -1089 162 -221 -112 -1089 -1089 188 -1089 -127 95 -1089 -112 53 -237 -1089 205 -1089 -1089 -1089 -1089 197 -1089 196 -212 -1089 153 -1089 -54 -227 162 -1089 -54 -1089 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 19 E= 6.6e-009 0.526316 0.052632 0.052632 0.368421 0.000000 0.315789 0.105263 0.578947 0.052632 0.000000 0.052632 0.894737 0.000000 1.000000 0.000000 0.000000 0.842105 0.052632 0.105263 0.000000 0.000000 0.894737 0.000000 0.105263 0.526316 0.000000 0.105263 0.368421 0.052632 0.000000 0.947368 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.947368 0.052632 0.000000 0.789474 0.000000 0.157895 0.052632 0.842105 0.000000 0.157895 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 regular expression -------------------------------------------------------------------------------- [AT][TC]TCAC[AT]GTCAA -------------------------------------------------------------------------------- Time 6.43 secs. ******************************************************************************** ******************************************************************************** MOTIF 2 MEME width = 13 sites = 13 llr = 151 E-value = 3.1e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif 2 Description -------------------------------------------------------------------------------- Simplified A ::18:5:::811: pos.-specific C :1::9::::2:2: probability G ::22:1a12:823 matrix T a98:14:981157 bits 2.1 * 1.9 * * 1.7 * * ** 1.5 ** * ** Relative 1.3 ** * *** * Entropy 1.1 ***** *** * * (16.8 bits) 0.8 ***** ***** * 0.6 *********** * 0.4 ************* 0.2 ************* 0.0 ------------- Multilevel TTTACAGTTAGTT consensus G T GG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------- 46848 221 1.77e-08 TAAGCATTTG TTTACAGTTAGTT ATTAAACGGC 51301 172 1.11e-07 CAACTCATGC TTTACTGTTAGTG CCATTAAATC 46782 242 1.27e-07 GCCGATGTTT TTTACAGTTAGCT TCCAAATCTG 44687 24 2.03e-07 TGTGAGACGT TTTACAGTTAGGG ATGGCGCGAG 45855 450 6.84e-07 ATATATCAAC TTTGCAGTTCGTT CCGAGAAATA 42626 19 7.84e-07 TCGTCCTTCG TTTACAGTTAATT TGGGGAAGTT 46130 365 1.89e-06 CTACCACTAA TTTACTGGTAGGT CCCCTTTTCA 37253 122 3.27e-06 TCGTCACCAT TTTACGGTTTGTT GTCGATTGTA 44443 326 3.83e-06 AAGAATATCC TTGACTGTGAGTG AGCGACGGCG 43501 399 7.23e-06 TAGTATCCCG TCGGCAGTTAGTT GGAGAATTAC 12679 143 1.03e-05 TCGCGAACAG TTAACTGTGAGCT TGGTTCGTGT 43705 154 1.08e-05 GAGATATTGT TTTGTAGTTAGAT GAACTGGGCG 19579 211 1.24e-05 TTACGTTCAT TTTACTGTTCTGG CCGTTGTCCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 46848 1.8e-08 220_[+2]_267 51301 1.1e-07 171_[+2]_316 46782 1.3e-07 241_[+2]_246 44687 2e-07 23_[+2]_464 45855 6.8e-07 449_[+2]_38 42626 7.8e-07 18_[+2]_469 46130 1.9e-06 364_[+2]_123 37253 3.3e-06 121_[+2]_366 44443 3.8e-06 325_[+2]_162 43501 7.2e-06 398_[+2]_89 12679 1e-05 142_[+2]_345 43705 1.1e-05 153_[+2]_334 19579 1.2e-05 210_[+2]_277 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 2 width=13 seqs=13 46848 ( 221) TTTACAGTTAGTT 1 51301 ( 172) TTTACTGTTAGTG 1 46782 ( 242) TTTACAGTTAGCT 1 44687 ( 24) TTTACAGTTAGGG 1 45855 ( 450) TTTGCAGTTCGTT 1 42626 ( 19) TTTACAGTTAATT 1 46130 ( 365) TTTACTGGTAGGT 1 37253 ( 122) TTTACGGTTTGTT 1 44443 ( 326) TTGACTGTGAGTG 1 43501 ( 399) TCGGCAGTTAGTT 1 12679 ( 143) TTAACTGTGAGCT 1 43705 ( 154) TTTGTAGTTAGAT 1 19579 ( 211) TTTACTGTTCTGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 13 n= 14152 bayes= 10.6179 E= 3.1e-001 -1035 -1035 -1035 197 -1035 -166 -1035 186 -182 -1035 -58 160 149 -1035 1 -1035 -1035 192 -1035 -172 98 -1035 -157 60 -1035 -1035 212 -1035 -1035 -1035 -157 186 -1035 -1035 -58 173 149 -66 -1035 -172 -182 -1035 188 -172 -182 -66 1 108 -1035 -1035 42 144 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 13 nsites= 13 E= 3.1e-001 0.000000 0.000000 0.000000 1.000000 0.000000 0.076923 0.000000 0.923077 0.076923 0.000000 0.153846 0.769231 0.769231 0.000000 0.230769 0.000000 0.000000 0.923077 0.000000 0.076923 0.538462 0.000000 0.076923 0.384615 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.076923 0.923077 0.000000 0.000000 0.153846 0.846154 0.769231 0.153846 0.000000 0.076923 0.076923 0.000000 0.846154 0.076923 0.076923 0.153846 0.230769 0.538462 0.000000 0.000000 0.307692 0.692308 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 regular expression -------------------------------------------------------------------------------- TTT[AG]C[AT]GTTAG[TG][TG] -------------------------------------------------------------------------------- Time 13.18 secs. ******************************************************************************** ******************************************************************************** MOTIF 3 MEME width = 16 sites = 20 llr = 212 E-value = 3.5e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif 3 Description -------------------------------------------------------------------------------- Simplified A 7991369a:9a31627 pos.-specific C 31:55:1:31:5727: probability G 1:1433118::23221 matrix T ::1::2::::11:1:3 bits 2.1 1.9 1.7 * 1.5 * * ** Relative 1.3 ** **** Entropy 1.1 ** ***** (15.3 bits) 0.8 *** ***** * * 0.6 **** ****** * ** 0.4 *********** **** 0.2 **************** 0.0 ---------------- Multilevel AAACCAAAGAACCACA consensus C GAG C AG T sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ---------------- 44449 417 5.02e-09 GAGCAAGTGA CAAGCAAAGAACCACA ACAGAACTTT 34984 343 3.68e-07 TAGGGTACCA ACACCGAAGAAACACA CCGAAAAAAA 37253 364 9.44e-07 GGTTTATTTG AAAGCGAAGAATCAAA TTGCTTCTCT 13123 361 1.06e-06 AATGCTTATA AAAGGGAAGAAGCAAA GCTGGGGCAG 15481 328 1.79e-06 AACGCCGGTA AAACGAAAGAACGCCG TGCCCACCTT 44443 473 2.41e-06 GATCTTAGCT CAACAAAAGAACGAGT CGACGCGACA 31987 438 2.41e-06 GACGCACAGA AAACCAAACATACACA CTCGCTCTTT 19579 312 2.66e-06 CAAACCAACG AAAACAAAGAACAGCA CTTCACGGTC 43705 435 2.94e-06 TAGCAGCGGA AAACGAAAGAACGTCG ATCGATACCT 46130 317 2.94e-06 ATCTGAGCGA CAAGAAAAGAACGAGT ACCGGACGGG 43763 423 7.19e-06 TCGACGTTGC CATCCTAACAACCACA GCTGCGCCAC 44687 324 7.19e-06 GTAGAAGTCG AAAGATAACAAGCCCA GCCCAAGAGA 42844 485 7.19e-06 GTAAAAAATC GAAGAAAAGAAACAAA 10835 317 8.44e-06 CGCGACCGGA AAAACGAAGAAAGCCT GGTGCCGGTG 35057 445 9.17e-06 CTCGTAAAGA AAGCCAAAGAACAAGA ACTCCGGAAA 43501 41 1.08e-05 GAAGAATGCC CAACGACAGAAACGCT CTCATCGAGT 13428 149 1.16e-05 CCTTGAATAC AAAGAGAAGCAGCTCA TTCAAGGAGC 46782 445 1.58e-05 AGAAAGCAGC AAACCTGACAATCACA GAACAGGTTT 24408 30 1.83e-05 TAGACCCGGT CAAGCAAGCAACCGCT TACATTCTAC 51301 326 2.27e-05 GCCACAGCAG ACACGGCAGCACCACA CACTGCGGTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 44449 5e-09 416_[+3]_68 34984 3.7e-07 342_[+3]_142 37253 9.4e-07 363_[+3]_121 13123 1.1e-06 360_[+3]_124 15481 1.8e-06 327_[+3]_157 44443 2.4e-06 472_[+3]_12 31987 2.4e-06 437_[+3]_47 19579 2.7e-06 311_[+3]_173 43705 2.9e-06 434_[+3]_50 46130 2.9e-06 316_[+3]_168 43763 7.2e-06 422_[+3]_62 44687 7.2e-06 323_[+3]_161 42844 7.2e-06 484_[+3] 10835 8.4e-06 316_[+3]_168 35057 9.2e-06 444_[+3]_40 43501 1.1e-05 40_[+3]_444 13428 1.2e-05 148_[+3]_336 46782 1.6e-05 444_[+3]_40 24408 1.8e-05 29_[+3]_455 51301 2.3e-05 325_[+3]_159 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 3 width=16 seqs=20 44449 ( 417) CAAGCAAAGAACCACA 1 34984 ( 343) ACACCGAAGAAACACA 1 37253 ( 364) AAAGCGAAGAATCAAA 1 13123 ( 361) AAAGGGAAGAAGCAAA 1 15481 ( 328) AAACGAAAGAACGCCG 1 44443 ( 473) CAACAAAAGAACGAGT 1 31987 ( 438) AAACCAAACATACACA 1 19579 ( 312) AAAACAAAGAACAGCA 1 43705 ( 435) AAACGAAAGAACGTCG 1 46130 ( 317) CAAGAAAAGAACGAGT 1 43763 ( 423) CATCCTAACAACCACA 1 44687 ( 324) AAAGATAACAAGCCCA 1 42844 ( 485) GAAGAAAAGAAACAAA 1 10835 ( 317) AAAACGAAGAAAGCCT 1 35057 ( 445) AAGCCAAAGAACAAGA 1 43501 ( 41) CAACGACAGAAACGCT 1 13428 ( 149) AAAGAGAAGCAGCTCA 1 46782 ( 445) AAACCTGACAATCACA 1 24408 ( 30) CAAGCAAGCAACCGCT 1 51301 ( 326) ACACGGCAGCACCACA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 14065 bayes= 9.70771 E= 3.5e-001 125 30 -219 -1097 172 -128 -1097 -1097 172 -1097 -219 -234 -145 104 80 -1097 -13 104 12 -1097 101 -1097 39 -76 164 -128 -219 -1097 180 -1097 -219 -1097 -1097 4 171 -1097 172 -128 -1097 -1097 180 -1097 -1097 -234 -13 104 -61 -135 -145 142 12 -1097 114 -70 -61 -135 -86 152 -61 -1097 125 -1097 -120 -2 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 20 E= 3.5e-001 0.650000 0.300000 0.050000 0.000000 0.900000 0.100000 0.000000 0.000000 0.900000 0.000000 0.050000 0.050000 0.100000 0.500000 0.400000 0.000000 0.250000 0.500000 0.250000 0.000000 0.550000 0.000000 0.300000 0.150000 0.850000 0.100000 0.050000 0.000000 0.950000 0.000000 0.050000 0.000000 0.000000 0.250000 0.750000 0.000000 0.900000 0.100000 0.000000 0.000000 0.950000 0.000000 0.000000 0.050000 0.250000 0.500000 0.150000 0.100000 0.100000 0.650000 0.250000 0.000000 0.600000 0.150000 0.150000 0.100000 0.150000 0.700000 0.150000 0.000000 0.650000 0.000000 0.100000 0.250000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 regular expression -------------------------------------------------------------------------------- [AC]AA[CG][CAG][AG]AA[GC]AA[CA][CG]AC[AT] -------------------------------------------------------------------------------- Time 19.71 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 24408 4.86e-04 29_[+3(1.83e-05)]_119_\ [+1(2.31e-06)]_324 9168 1.71e-02 405_[+1(8.64e-06)]_83 42844 2.78e-05 287_[+1(1.10e-05)]_146_\ [+1(3.82e-07)]_27_[+3(7.19e-06)] 31987 5.89e-06 289_[+1(8.17e-08)]_136_\ [+3(2.41e-06)]_47 13123 1.11e-02 3_[+3(7.52e-05)]_341_[+3(1.06e-06)]_\ 124 13428 1.20e-03 2_[+1(1.76e-05)]_134_[+3(1.16e-05)]_\ 336 46782 2.59e-08 241_[+2(1.27e-07)]_101_\ [+1(3.82e-07)]_77_[+3(1.58e-05)]_40 46848 4.47e-08 59_[+1(8.17e-08)]_149_\ [+2(1.77e-08)]_25_[+2(5.44e-05)]_229 47198 2.16e-02 113_[+1(3.14e-05)]_375 15481 1.36e-02 327_[+3(1.79e-06)]_157 16787 1.18e-02 388_[+1(6.64e-07)]_100 51301 1.81e-05 171_[+2(1.11e-07)]_141_\ [+3(2.27e-05)]_159 44443 7.67e-07 325_[+2(3.83e-06)]_12_\ [+1(3.44e-06)]_110_[+3(2.41e-06)]_12 44449 8.95e-07 346_[+1(9.33e-06)]_58_\ [+3(5.02e-09)]_68 10835 1.99e-02 316_[+3(8.44e-06)]_168 44687 1.00e-07 23_[+2(2.03e-07)]_189_\ [+1(2.31e-06)]_86_[+3(7.19e-06)]_161 19579 5.02e-06 210_[+2(1.24e-05)]_88_\ [+3(2.66e-06)]_[+1(7.86e-06)]_161 34984 2.68e-03 342_[+3(3.68e-07)]_142 35057 7.05e-04 258_[+1(1.53e-05)]_174_\ [+3(9.17e-06)]_40 45855 1.35e-04 391_[+1(7.86e-06)]_46_\ [+2(6.84e-07)]_38 12679 1.73e-02 142_[+2(1.03e-05)]_345 12779 5.46e-03 39_[+1(1.85e-06)]_449 46130 1.19e-04 316_[+3(2.94e-06)]_32_\ [+2(1.89e-06)]_123 42626 1.21e-03 18_[+2(7.84e-07)]_469 43763 2.25e-04 273_[+1(1.85e-06)]_137_\ [+3(7.19e-06)]_62 43501 1.38e-05 40_[+3(1.08e-05)]_135_\ [+1(1.04e-05)]_195_[+2(7.23e-06)]_89 43705 2.51e-04 153_[+2(1.08e-05)]_268_\ [+3(2.94e-06)]_50 37253 1.24e-06 121_[+2(3.27e-06)]_229_\ [+3(9.44e-07)]_56_[+1(1.76e-05)]_53 43575 8.47e-01 500 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because nmotifs = 3 reached. ******************************************************************************** CPU: seaotter.hsd1.wa.comcast.net ********************************************************************************