******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.10.0 (Release date: Wed May 21 10:35:36 2014 +1000) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net. This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme.nbcr.net. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= motifs/288/288.seqs.fa ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ 42649 1.0000 500 8860 1.0000 500 46542 1.0000 500 46657 1.0000 500 22411 1.0000 500 43427 1.0000 500 29983 1.0000 500 49059 1.0000 500 16683 1.0000 500 50321 1.0000 500 18620 1.0000 500 10893 1.0000 500 20082 1.0000 500 45958 1.0000 500 48245 1.0000 500 42738 1.0000 500 44234 1.0000 500 46173 1.0000 500 50112 1.0000 500 43911 1.0000 500 32634 1.0000 500 45353 1.0000 500 45394 1.0000 500 47757 1.0000 500 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme motifs/288/288.seqs.fa -oc motifs/288 -dna -minw 12 -maxw 21 -nmotifs 3 -maxsize 500000 model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 12 maxw= 21 minic= 0.00 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 24 wnsites= 0.8 theta: prob= 1 spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 12000 N= 24 strands: + sample: seed= 0 seqfrac= 1 Letter frequencies in dataset: A 0.267 C 0.241 G 0.228 T 0.264 Background letter frequencies (from dataset with add-one prior applied): A 0.267 C 0.241 G 0.228 T 0.264 ******************************************************************************** ******************************************************************************** MOTIF 1 MEME width = 12 sites = 24 llr = 213 E-value = 1.1e-003 ******************************************************************************** -------------------------------------------------------------------------------- Motif 1 Description -------------------------------------------------------------------------------- Simplified A 16:::8:532:a pos.-specific C ::3:8:91::7: probability G 61:::2::611: matrix T 336a1:14:72: bits 2.1 1.9 * 1.7 * * * 1.5 * * * Relative 1.3 * ** * Entropy 1.1 **** * (12.8 bits) 0.9 ***** **** 0.6 ******* **** 0.4 ************ 0.2 ************ 0.0 ------------ Multilevel GATTCACAGTCA consensus TTC TAAT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------ 47757 151 1.35e-07 GGAAGGACAG GATTCACTGTCA TGTTAGTAGT 46542 289 1.35e-07 GGATGGACAT GATTCACTGTCA CTTCAGACTG 49059 38 4.50e-06 CTGTGTCTGT GTTTCACAGTGA GTGAGCGCGT 50112 328 8.26e-06 CCACGGCCAA AACTCACAGTCA AAATCACGAT 16683 299 8.26e-06 GCCGCGTAGC AACTCACAGTCA ATTAAAAATT 42738 354 1.04e-05 ACGTGAAGGC GATTCACTCTCA GCTCAGCGTT 18620 118 1.15e-05 TTTTTACCGT TTCTCACTATCA GTCGCGCAAG 46657 9 1.15e-05 ACGTCTCG GTTTCACCGACA CGCCAGTGTG 43911 429 1.29e-05 GTCATTTTGC GTTTCATAGTCA AATACAAGGT 22411 250 1.57e-05 GTAGGGTAAG GATTCACAAATA GTACAAGCGC 20082 137 1.74e-05 AACTTCGTCC TATTCGCTATCA ATCTTGACGA 43427 457 1.74e-05 ATCTTGTTCA CTTTCACAGTCA GACTTTACGT 46173 137 2.12e-05 ACAGAAGTAG TGCTCACTGTCA ATGACGTGTT 32634 70 4.74e-05 TCTCCACTAC TAGTCACAATCA AGGTCTCTGT 45958 248 4.74e-05 ATTGAAAAAT GACTTACTGTTA GTTTCGCATG 45394 278 5.15e-05 TGAGTCGTTC GATTCACCAATA CGTCCTTCAG 45353 120 6.04e-05 GGAATGCACG GATTCGCCAACA GAGACAGCTG 10893 417 7.10e-05 GGAACTCTCG GGCTTACAGTCA AGCTGTCGAT 50321 280 7.10e-05 CAATGAAAGC TATTCATAGTTA CGACTAAGAG 44234 249 7.66e-05 GATGCTGTTT GTTTCGCAGAGA GGCCCAACCC 42649 183 1.03e-04 CGGATCTTTT GTCTCACTAGTA TATGCCTTGC 48245 107 1.47e-04 TACATAACTC TATTGACTGTGA ATCTGACCGT 29983 437 1.57e-04 GATGATCAAA GTTTCACTGGCT TTACATTACA 8860 104 1.68e-04 AAAGAAACAC GACTAGCAATCA TCAGCAAGCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 47757 1.4e-07 150_[+1]_338 46542 1.4e-07 288_[+1]_200 49059 4.5e-06 37_[+1]_451 50112 8.3e-06 327_[+1]_161 16683 8.3e-06 298_[+1]_190 42738 1e-05 353_[+1]_135 18620 1.2e-05 117_[+1]_371 46657 1.2e-05 8_[+1]_480 43911 1.3e-05 428_[+1]_60 22411 1.6e-05 249_[+1]_239 20082 1.7e-05 136_[+1]_352 43427 1.7e-05 456_[+1]_32 46173 2.1e-05 136_[+1]_352 32634 4.7e-05 69_[+1]_419 45958 4.7e-05 247_[+1]_241 45394 5.1e-05 277_[+1]_211 45353 6e-05 119_[+1]_369 10893 7.1e-05 416_[+1]_72 50321 7.1e-05 279_[+1]_209 44234 7.7e-05 248_[+1]_240 42649 0.0001 182_[+1]_306 48245 0.00015 106_[+1]_382 29983 0.00016 436_[+1]_52 8860 0.00017 103_[+1]_385 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 1 width=12 seqs=24 47757 ( 151) GATTCACTGTCA 1 46542 ( 289) GATTCACTGTCA 1 49059 ( 38) GTTTCACAGTGA 1 50112 ( 328) AACTCACAGTCA 1 16683 ( 299) AACTCACAGTCA 1 42738 ( 354) GATTCACTCTCA 1 18620 ( 118) TTCTCACTATCA 1 46657 ( 9) GTTTCACCGACA 1 43911 ( 429) GTTTCATAGTCA 1 22411 ( 250) GATTCACAAATA 1 20082 ( 137) TATTCGCTATCA 1 43427 ( 457) CTTTCACAGTCA 1 46173 ( 137) TGCTCACTGTCA 1 32634 ( 70) TAGTCACAATCA 1 45958 ( 248) GACTTACTGTTA 1 45394 ( 278) GATTCACCAATA 1 45353 ( 120) GATTCGCCAACA 1 10893 ( 417) GGCTTACAGTCA 1 50321 ( 280) TATTCATAGTTA 1 44234 ( 249) GTTTCGCAGAGA 1 42649 ( 183) GTCTCACTAGTA 1 48245 ( 107) TATTGACTGTGA 1 29983 ( 437) GTTTCACTGGCT 1 8860 ( 104) GACTAGCAATCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 11736 bayes= 8.93074 E= 1.1e-003 -168 -253 145 -8 113 -1123 -145 34 -1123 47 -245 124 -1123 -1123 -1123 192 -268 179 -245 -166 164 -1123 -45 -1123 -1123 193 -1123 -166 78 -95 -1123 66 32 -253 145 -1123 -36 -1123 -145 142 -1123 147 -87 -34 184 -1123 -1123 -266 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 24 E= 1.1e-003 0.083333 0.041667 0.625000 0.250000 0.583333 0.000000 0.083333 0.333333 0.000000 0.333333 0.041667 0.625000 0.000000 0.000000 0.000000 1.000000 0.041667 0.833333 0.041667 0.083333 0.833333 0.000000 0.166667 0.000000 0.000000 0.916667 0.000000 0.083333 0.458333 0.125000 0.000000 0.416667 0.333333 0.041667 0.625000 0.000000 0.208333 0.000000 0.083333 0.708333 0.000000 0.666667 0.125000 0.208333 0.958333 0.000000 0.000000 0.041667 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 regular expression -------------------------------------------------------------------------------- [GT][AT][TC]TCAC[AT][GA][TA][CT]A -------------------------------------------------------------------------------- Time 5.51 secs. ******************************************************************************** ******************************************************************************** MOTIF 2 MEME width = 12 sites = 10 llr = 116 E-value = 2.7e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif 2 Description -------------------------------------------------------------------------------- Simplified A 169:5::5a123 pos.-specific C :::a:::::::1 probability G :41::a14:98: matrix T 9:::5:91:::6 bits 2.1 * * 1.9 * * * 1.7 * * ** 1.5 * ** ** ** Relative 1.3 * ** ** *** Entropy 1.1 **** ** *** (16.7 bits) 0.9 ******* *** 0.6 ************ 0.4 ************ 0.2 ************ 0.0 ------------ Multilevel TAACAGTAAGGT consensus G T G AA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------ 18620 47 1.42e-07 ATGTACAACG TAACAGTAAGGT AACGCGGACA 50321 86 1.42e-07 AGATCCGGGC TAACAGTAAGGT CTATTTTCCT 46173 348 4.87e-07 TCATAGTGAC TGACTGTGAGGT GAAACTTGCT 47757 357 1.56e-06 GTTGCGAAGT TAACTGTAAGGC AAGAAAAACG 42738 25 3.02e-06 GTTCACCGTC TAACAGTAAGAA CTAGCCATCA 42649 85 3.98e-06 TGCCAAAGCC TGGCTGTGAGGT TTTTCGCACA 32634 287 5.24e-06 AATCTGCCGC TGACTGTGAAGT AAAATCGTAG 22411 332 5.60e-06 GATGCCATCA AAACAGTAAGGA ACAACTCTGA 10893 188 6.28e-06 CGCAAGGGAG TGACAGGGAGGA GGAAAGCAGC 45353 22 6.71e-06 AGCCTTCAGC TAACTGTTAGAT AAATCCTTTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 18620 1.4e-07 46_[+2]_442 50321 1.4e-07 85_[+2]_403 46173 4.9e-07 347_[+2]_141 47757 1.6e-06 356_[+2]_132 42738 3e-06 24_[+2]_464 42649 4e-06 84_[+2]_404 32634 5.2e-06 286_[+2]_202 22411 5.6e-06 331_[+2]_157 10893 6.3e-06 187_[+2]_301 45353 6.7e-06 21_[+2]_467 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 2 width=12 seqs=10 18620 ( 47) TAACAGTAAGGT 1 50321 ( 86) TAACAGTAAGGT 1 46173 ( 348) TGACTGTGAGGT 1 47757 ( 357) TAACTGTAAGGC 1 42738 ( 25) TAACAGTAAGAA 1 42649 ( 85) TGGCTGTGAGGT 1 32634 ( 287) TGACTGTGAAGT 1 22411 ( 332) AAACAGTAAGGA 1 10893 ( 188) TGACAGGGAGGA 1 45353 ( 22) TAACTGTTAGAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 11736 bayes= 10.4472 E= 2.7e+002 -141 -997 -997 177 117 -997 81 -997 175 -997 -119 -997 -997 205 -997 -997 91 -997 -997 92 -997 -997 213 -997 -997 -997 -119 177 91 -997 81 -140 190 -997 -997 -997 -141 -997 198 -997 -42 -997 181 -997 17 -127 -997 118 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 10 E= 2.7e+002 0.100000 0.000000 0.000000 0.900000 0.600000 0.000000 0.400000 0.000000 0.900000 0.000000 0.100000 0.000000 0.000000 1.000000 0.000000 0.000000 0.500000 0.000000 0.000000 0.500000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.100000 0.900000 0.500000 0.000000 0.400000 0.100000 1.000000 0.000000 0.000000 0.000000 0.100000 0.000000 0.900000 0.000000 0.200000 0.000000 0.800000 0.000000 0.300000 0.100000 0.000000 0.600000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 regular expression -------------------------------------------------------------------------------- T[AG]AC[AT]GT[AG]AG[GA][TA] -------------------------------------------------------------------------------- Time 10.53 secs. ******************************************************************************** ******************************************************************************** MOTIF 3 MEME width = 12 sites = 18 llr = 170 E-value = 5.2e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif 3 Description -------------------------------------------------------------------------------- Simplified A 11374239a:62 pos.-specific C 8:7:371::918 probability G 29:1:16:::2: matrix T :::33::1:12: bits 2.1 1.9 * 1.7 * ** 1.5 * *** Relative 1.3 * *** * Entropy 1.1 *** *** * (13.6 bits) 0.9 **** ***** * 0.6 **** ***** * 0.4 ************ 0.2 ************ 0.0 ------------ Multilevel CGCAACGAACAC consensus ATCAA T sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------ 50112 441 1.66e-07 GCACTTCTTT CGCATCGAACAC CGGTAGTAAG 43911 329 6.25e-07 TTCACGGGGA CGCTCCGAACAC CGCCCATCAA 20082 428 2.49e-06 CGTTCCGGAA CGAAACGAACGC GTCCTACCTA 32634 335 3.43e-06 TGTTTTCCTT CGAACCGAACTC CCCCGGCCTT 47757 208 4.82e-06 AGGTAAGGTT CGCATAAAACAC AAGTCGGGGG 45394 414 5.52e-06 CGAGCAGCCC CGCATCGAACCC GGTCGCGGTG 48245 391 5.52e-06 AGATTGTTTG CGCTACCAACAC ACTATCATCC 43427 341 7.19e-06 CCATACCACA CGCAAAGAACAA CGAAAGAATT 45353 301 1.77e-05 ATCATGAAAA CGCAACGTACTC TTCCATTGGG 44234 320 1.77e-05 CGTCGCGGTT GGCAAAGAACGC TGATCCAAGG 10893 283 2.47e-05 CGACACGATC CGATCGGAACAC CACTGCCCGA 18620 156 3.18e-05 GCCTTTTTCC CACACCGAACAA TCCCAACGGA 49059 376 3.46e-05 GTCTTTTCTG GGATACAAACAC ATGCAGGCAA 46542 1 4.56e-05 . CGCGTCAAACGC CGTGTCGACG 45958 157 6.57e-05 CAGTAGAATA AGCACAAAACAC AGTATCCTCA 29983 360 7.04e-05 TGAAAAGAAC GGCAACGAATTC CGACACATTT 50321 134 9.55e-05 TCTTTCTCGT CGCTTCCAACTA TCTTAATCTA 8860 92 1.16e-04 CTCGCCACGC CAAAAGAAACAC GACTAGCAAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 50112 1.7e-07 440_[+3]_48 43911 6.2e-07 328_[+3]_160 20082 2.5e-06 427_[+3]_61 32634 3.4e-06 334_[+3]_154 47757 4.8e-06 207_[+3]_281 45394 5.5e-06 413_[+3]_75 48245 5.5e-06 390_[+3]_98 43427 7.2e-06 340_[+3]_148 45353 1.8e-05 300_[+3]_188 44234 1.8e-05 319_[+3]_169 10893 2.5e-05 282_[+3]_206 18620 3.2e-05 155_[+3]_333 49059 3.5e-05 375_[+3]_113 46542 4.6e-05 [+3]_488 45958 6.6e-05 156_[+3]_332 29983 7e-05 359_[+3]_129 50321 9.5e-05 133_[+3]_355 8860 0.00012 91_[+3]_397 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 3 width=12 seqs=18 50112 ( 441) CGCATCGAACAC 1 43911 ( 329) CGCTCCGAACAC 1 20082 ( 428) CGAAACGAACGC 1 32634 ( 335) CGAACCGAACTC 1 47757 ( 208) CGCATAAAACAC 1 45394 ( 414) CGCATCGAACCC 1 48245 ( 391) CGCTACCAACAC 1 43427 ( 341) CGCAAAGAACAA 1 45353 ( 301) CGCAACGTACTC 1 44234 ( 320) GGCAAAGAACGC 1 10893 ( 283) CGATCGGAACAC 1 18620 ( 156) CACACCGAACAA 1 49059 ( 376) GGATACAAACAC 1 46542 ( 1) CGCGTCAAACGC 1 45958 ( 157) AGCACAAAACAC 1 29983 ( 360) GGCAACGAATTC 1 50321 ( 134) CGCTTCCAACTA 1 8860 ( 92) CAAAAGAAACAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 11736 bayes= 10.1955 E= 5.2e+002 -226 169 -45 -1081 -126 -1081 196 -1081 6 158 -1081 -1081 132 -1081 -204 7 74 21 -1081 7 -26 147 -104 -1081 6 -111 142 -1081 182 -1081 -1081 -225 191 -1081 -1081 -1081 -1081 197 -1081 -225 106 -211 -45 -25 -68 179 -1081 -1081 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 18 E= 5.2e+002 0.055556 0.777778 0.166667 0.000000 0.111111 0.000000 0.888889 0.000000 0.277778 0.722222 0.000000 0.000000 0.666667 0.000000 0.055556 0.277778 0.444444 0.277778 0.000000 0.277778 0.222222 0.666667 0.111111 0.000000 0.277778 0.111111 0.611111 0.000000 0.944444 0.000000 0.000000 0.055556 1.000000 0.000000 0.000000 0.000000 0.000000 0.944444 0.000000 0.055556 0.555556 0.055556 0.166667 0.222222 0.166667 0.833333 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 regular expression -------------------------------------------------------------------------------- CG[CA][AT][ACT][CA][GA]AAC[AT]C -------------------------------------------------------------------------------- Time 16.28 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 42649 3.53e-03 84_[+2(3.98e-06)]_404 8860 4.40e-02 500 46542 1.48e-04 [+3(4.56e-05)]_276_[+1(1.35e-07)]_\ 200 46657 3.81e-02 8_[+1(1.15e-05)]_480 22411 4.87e-04 249_[+1(1.57e-05)]_70_\ [+2(5.60e-06)]_157 43427 6.10e-04 340_[+3(7.19e-06)]_104_\ [+1(1.74e-05)]_32 29983 5.43e-02 359_[+3(7.04e-05)]_129 49059 3.93e-04 37_[+1(4.50e-06)]_326_\ [+3(3.46e-05)]_62_[+1(6.56e-05)]_39 16683 4.40e-02 298_[+1(8.26e-06)]_190 50321 1.57e-05 85_[+2(1.42e-07)]_36_[+3(9.55e-05)]_\ 134_[+1(7.10e-05)]_209 18620 1.20e-06 46_[+2(1.42e-07)]_59_[+1(1.15e-05)]_\ 26_[+3(3.18e-05)]_333 10893 1.34e-04 187_[+2(6.28e-06)]_83_\ [+3(2.47e-05)]_122_[+1(7.10e-05)]_72 20082 5.73e-04 136_[+1(1.74e-05)]_279_\ [+3(2.49e-06)]_61 45958 1.44e-02 156_[+3(6.57e-05)]_79_\ [+1(4.74e-05)]_241 48245 2.01e-03 390_[+3(5.52e-06)]_98 42738 3.23e-04 24_[+2(3.02e-06)]_317_\ [+1(1.04e-05)]_135 44234 3.68e-03 248_[+1(7.66e-05)]_59_\ [+3(1.77e-05)]_169 46173 1.10e-04 136_[+1(2.12e-05)]_186_\ [+1(6.56e-05)]_1_[+2(4.87e-07)]_125_[+2(8.10e-05)]_4 50112 2.13e-06 249_[+3(7.04e-05)]_66_\ [+1(8.26e-06)]_36_[+2(7.26e-05)]_53_[+3(1.66e-07)]_48 43911 1.85e-04 328_[+3(6.25e-07)]_88_\ [+1(1.29e-05)]_60 32634 1.45e-05 69_[+1(4.74e-05)]_80_[+3(8.05e-05)]_\ 113_[+2(5.24e-06)]_36_[+3(3.43e-06)]_154 45353 9.29e-05 21_[+2(6.71e-06)]_86_[+1(6.04e-05)]_\ 169_[+3(1.77e-05)]_188 45394 1.85e-03 277_[+1(5.15e-05)]_124_\ [+3(5.52e-06)]_75 47757 3.39e-08 150_[+1(1.35e-07)]_45_\ [+3(4.82e-06)]_12_[+3(9.55e-05)]_113_[+2(1.56e-06)]_132 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because nmotifs = 3 reached. ******************************************************************************** CPU: seaotter.hsd1.wa.comcast.net ********************************************************************************