******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.10.0 (Release date: Wed May 21 10:35:36 2014 +1000) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net. This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme.nbcr.net. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= motifs/339/339.seqs.fa ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ 9546 1.0000 500 47033 1.0000 500 47077 1.0000 500 47553 1.0000 500 43417 1.0000 500 49064 1.0000 500 15730 1.0000 500 49251 1.0000 500 49591 1.0000 500 50056 1.0000 500 41130 1.0000 500 50281 1.0000 500 6848 1.0000 500 50414 1.0000 500 41374 1.0000 500 10584 1.0000 500 51609 1.0000 500 11217 1.0000 500 11235 1.0000 500 41886 1.0000 500 44982 1.0000 500 45141 1.0000 500 48238 1.0000 500 46313 1.0000 500 48616 1.0000 500 47543 1.0000 500 46890 1.0000 500 35684 1.0000 500 43508 1.0000 500 44923 1.0000 500 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme motifs/339/339.seqs.fa -oc motifs/339 -dna -minw 12 -maxw 21 -nmotifs 3 -maxsize 500000 model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 12 maxw= 21 minic= 0.00 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 30 wnsites= 0.8 theta: prob= 1 spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 15000 N= 30 strands: + sample: seed= 0 seqfrac= 1 Letter frequencies in dataset: A 0.270 C 0.228 G 0.225 T 0.278 Background letter frequencies (from dataset with add-one prior applied): A 0.270 C 0.228 G 0.225 T 0.278 ******************************************************************************** ******************************************************************************** MOTIF 1 MEME width = 12 sites = 30 llr = 270 E-value = 1.1e-010 ******************************************************************************** -------------------------------------------------------------------------------- Motif 1 Description -------------------------------------------------------------------------------- Simplified A 6:::918:1295 pos.-specific C :312:9:2:31: probability G 2::8:::835:5 matrix T 279:1:2:6::: bits 2.2 1.9 1.7 * 1.5 ** * Relative 1.3 **** * * Entropy 1.1 ****** * (13.0 bits) 0.9 ******* ** 0.6 *********** 0.4 ************ 0.2 ************ 0.0 ------------ Multilevel ATTGACAGTGAA consensus TC C T GC G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------ 35684 193 6.67e-08 AAAAGCGTGG ATTGACAGTGAG ATTGATATTG 41374 235 6.67e-08 GAAACGAGTC ATTGACAGTGAG CCGTAAAAAG 50414 235 6.67e-08 GAAACGAGTC ATTGACAGTGAG CCGTAAAAAG 50281 349 1.47e-07 AGCTTCGATA ATTGACAGTGAA TTTGCTCCAA 45141 295 2.01e-07 CGTGTGGTGG ATTGACAGGGAG CTTCTCATCG 47033 489 8.06e-07 GTCTGTAGTC TTTGACAGTGAA 47543 483 1.50e-06 AAAGAAATCT ATTGACTGTGAA TCCATC 44923 488 3.49e-06 TTGCCGCTTG ATTCACAGTCAA T 46313 160 7.73e-06 ATTTGCAGCA GTTGACAGTAAG ACAGAATACC 48238 308 7.73e-06 AGTAAACTTG ACTGACTGTCAG AGTTTCCATT 41886 206 9.15e-06 TTTTCCCTAG TTTCACAGTCAG TAATGGTAGT 49591 106 9.15e-06 ATGGTTATAC ACTGACAGAGAG AGCGTTCTTT 49064 192 9.15e-06 AATCGAGACC ATTGACACGCAA ATCATCCATC 10584 75 1.44e-05 TTGACTGCAC ATTCACTGTCAA CTAACTAACA 44982 61 2.39e-05 ATATTGAGCA ATCGACAGGAAA ATGTGGAGAC 49251 326 2.82e-05 GATAGGCTGA GCTGACAGAGAG CGCCTGGCGA 47553 210 3.43e-05 AAAACCTTGC ATTCACTGTAAA CATTCACAAT 50056 351 4.90e-05 CCAATTACCA ACCCACAGTCAA GCCATATCCT 51609 71 5.75e-05 CGATCACGAG GTTGACACGAAG ATTCTCAATG 11217 187 6.26e-05 TACGTAACCT TTCGACACGGAG ACTTTGACGA 48616 205 7.94e-05 TAGAGATTCG ACCGACAGGGCG CATCGCACGA 46890 94 9.95e-05 AGTCGTTTCC TCTGACTGACAG GATTCCTCTA 43508 356 1.14e-04 TAATATATGC GGTGACTGTGAA GTCATCCTGA 41130 429 1.14e-04 AAAGATGAAC GTTGAAACTGAA TCAGAAGTGG 43417 326 1.32e-04 TTGTGATTTA CTTGTCAGTCAG ACAATCAGTC 47077 77 1.84e-04 TTCTCGCTGC ATTCTCACGCAA AACGAAGTCT 6848 359 2.07e-04 ATGTTGTTGT ACTGAAAGGCCA CTGTGTAAGT 9546 126 2.63e-04 GTGAATTTCT TCTGACAGTATA AACGTGACAT 11235 373 3.65e-04 GGACAAGACT TTTCTAAGGGAA ACTACAAAGG 15730 405 4.04e-04 TCAATCCGCC TTTGACTGGGCT CTCGACCACG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 35684 6.7e-08 192_[+1]_296 41374 6.7e-08 234_[+1]_254 50414 6.7e-08 234_[+1]_254 50281 1.5e-07 348_[+1]_140 45141 2e-07 294_[+1]_194 47033 8.1e-07 488_[+1] 47543 1.5e-06 482_[+1]_6 44923 3.5e-06 487_[+1]_1 46313 7.7e-06 159_[+1]_329 48238 7.7e-06 307_[+1]_181 41886 9.2e-06 205_[+1]_283 49591 9.2e-06 105_[+1]_383 49064 9.2e-06 191_[+1]_297 10584 1.4e-05 74_[+1]_414 44982 2.4e-05 60_[+1]_428 49251 2.8e-05 325_[+1]_163 47553 3.4e-05 209_[+1]_279 50056 4.9e-05 350_[+1]_138 51609 5.7e-05 70_[+1]_418 11217 6.3e-05 186_[+1]_302 48616 7.9e-05 204_[+1]_284 46890 0.0001 93_[+1]_395 43508 0.00011 355_[+1]_133 41130 0.00011 428_[+1]_60 43417 0.00013 325_[+1]_163 47077 0.00018 76_[+1]_412 6848 0.00021 358_[+1]_130 9546 0.00026 125_[+1]_363 11235 0.00037 372_[+1]_116 15730 0.0004 404_[+1]_84 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 1 width=12 seqs=30 35684 ( 193) ATTGACAGTGAG 1 41374 ( 235) ATTGACAGTGAG 1 50414 ( 235) ATTGACAGTGAG 1 50281 ( 349) ATTGACAGTGAA 1 45141 ( 295) ATTGACAGGGAG 1 47033 ( 489) TTTGACAGTGAA 1 47543 ( 483) ATTGACTGTGAA 1 44923 ( 488) ATTCACAGTCAA 1 46313 ( 160) GTTGACAGTAAG 1 48238 ( 308) ACTGACTGTCAG 1 41886 ( 206) TTTCACAGTCAG 1 49591 ( 106) ACTGACAGAGAG 1 49064 ( 192) ATTGACACGCAA 1 10584 ( 75) ATTCACTGTCAA 1 44982 ( 61) ATCGACAGGAAA 1 49251 ( 326) GCTGACAGAGAG 1 47553 ( 210) ATTCACTGTAAA 1 50056 ( 351) ACCCACAGTCAA 1 51609 ( 71) GTTGACACGAAG 1 11217 ( 187) TTCGACACGGAG 1 48616 ( 205) ACCGACAGGGCG 1 46890 ( 94) TCTGACTGACAG 1 43508 ( 356) GGTGACTGTGAA 1 41130 ( 429) GTTGAAACTGAA 1 43417 ( 326) CTTGTCAGTCAG 1 47077 ( 77) ATTCTCACGCAA 1 6848 ( 359) ACTGAAAGGCCA 1 9546 ( 126) TCTGACAGTATA 1 11235 ( 373) TTTCTAAGGGAA 1 15730 ( 405) TTTGACTGGGCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 14670 bayes= 8.93074 E= 1.1e-010 107 -277 -43 -25 -1155 23 -275 133 -1155 -77 -1155 164 -1155 4 177 -1155 173 -1155 -1155 -147 -143 198 -1155 -1155 150 -1155 -1155 -25 -1155 -45 189 -1155 -143 -1155 57 103 -70 55 115 -1155 168 -119 -1155 -305 89 -1155 106 -305 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 30 E= 1.1e-010 0.566667 0.033333 0.166667 0.233333 0.000000 0.266667 0.033333 0.700000 0.000000 0.133333 0.000000 0.866667 0.000000 0.233333 0.766667 0.000000 0.900000 0.000000 0.000000 0.100000 0.100000 0.900000 0.000000 0.000000 0.766667 0.000000 0.000000 0.233333 0.000000 0.166667 0.833333 0.000000 0.100000 0.000000 0.333333 0.566667 0.166667 0.333333 0.500000 0.000000 0.866667 0.100000 0.000000 0.033333 0.500000 0.000000 0.466667 0.033333 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 regular expression -------------------------------------------------------------------------------- [AT][TC]T[GC]AC[AT]G[TG][GC]A[AG] -------------------------------------------------------------------------------- Time 7.01 secs. ******************************************************************************** ******************************************************************************** MOTIF 2 MEME width = 16 sites = 14 llr = 180 E-value = 9.0e-006 ******************************************************************************** -------------------------------------------------------------------------------- Motif 2 Description -------------------------------------------------------------------------------- Simplified A ::a:a:1:a6:24131 pos.-specific C :5:a:::6:1333634 probability G :::::a:::3:112:5 matrix T a5::::94:174214: bits 2.2 * * 1.9 * **** * 1.7 * **** * 1.5 * **** * Relative 1.3 * ***** * Entropy 1.1 ********* * (18.5 bits) 0.9 ********* * * 0.6 ********* * * 0.4 *********** *** 0.2 ************ *** 0.0 ---------------- Multilevel TCACAGTCAATTACTG consensus T T GCCCGAC sequence AT C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ---------------- 50056 236 2.93e-09 AAATGTCGGA TCACAGTCAATCACTG CTTGACTTAA 41886 439 9.77e-08 GTGCGCTTCC TCACAGTCAATTAGAG GTACATTCGG 41374 323 9.77e-08 GGAAATCTTT TTACAGTTAATCCCAC CAAAGGAACT 50414 323 9.77e-08 GGAAATCTTT TTACAGTTAATCCCAC CAAAGGAACT 50281 419 1.51e-07 GTTCTGATTC TCACAGTCAACTTCCC ACAATCTTGG 48238 136 1.76e-07 TTCGTTGCAG TCACAGTCAATTCATC CAATCGGTCG 43417 161 1.98e-07 ATCACATCTA TTACAGTCAGTCGCCG TAAACTAGCA 46890 158 8.14e-07 TGTCGGAAAA TTACAGTCAATGAGTC ACGGTCCTCC 44923 241 1.07e-06 AACATATAAT TTACAGTTAGCTCGAG ATGAGAGCTC 47553 470 1.69e-06 TGCCTTTCTT TTACAGTTAGTAAACC ATCTTCATTT 47033 258 2.20e-06 AATCAACAGT TCACAGTTATCTGCTG TAGTTTTGAG 47077 29 2.34e-06 ACATCGATGC TTACAGATAGTATCTG GAGGCGCGCC 51609 266 2.48e-06 GTCACCAATG TCACAGACACTTTCTG AATAGCATTT 47543 31 6.03e-06 ATGGTGTCAC TCACAGTCAACAATCA ATCCAAGAAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 50056 2.9e-09 235_[+2]_249 41886 9.8e-08 438_[+2]_46 41374 9.8e-08 322_[+2]_162 50414 9.8e-08 322_[+2]_162 50281 1.5e-07 418_[+2]_66 48238 1.8e-07 135_[+2]_349 43417 2e-07 160_[+2]_324 46890 8.1e-07 157_[+2]_327 44923 1.1e-06 240_[+2]_244 47553 1.7e-06 469_[+2]_15 47033 2.2e-06 257_[+2]_227 47077 2.3e-06 28_[+2]_456 51609 2.5e-06 265_[+2]_219 47543 6e-06 30_[+2]_454 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 2 width=16 seqs=14 50056 ( 236) TCACAGTCAATCACTG 1 41886 ( 439) TCACAGTCAATTAGAG 1 41374 ( 323) TTACAGTTAATCCCAC 1 50414 ( 323) TTACAGTTAATCCCAC 1 50281 ( 419) TCACAGTCAACTTCCC 1 48238 ( 136) TCACAGTCAATTCATC 1 43417 ( 161) TTACAGTCAGTCGCCG 1 46890 ( 158) TTACAGTCAATGAGTC 1 44923 ( 241) TTACAGTTAGCTCGAG 1 47553 ( 470) TTACAGTTAGTAAACC 1 47033 ( 258) TCACAGTTATCTGCTG 1 47077 ( 29) TTACAGATAGTATCTG 1 51609 ( 266) TCACAGACACTTTCTG 1 47543 ( 31) TCACAGTCAACAATCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 14550 bayes= 10.6262 E= 9.0e-006 -1045 -1045 -1045 185 -1045 113 -1045 85 189 -1045 -1045 -1045 -1045 213 -1045 -1045 189 -1045 -1045 -1045 -1045 -1045 215 -1045 -92 -1045 -1045 163 -1045 133 -1045 63 189 -1045 -1045 -1045 108 -167 35 -196 -1045 33 -1045 136 -33 33 -165 63 40 33 -65 -37 -92 133 -7 -196 8 33 -1045 63 -192 91 115 -1045 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 14 E= 9.0e-006 0.000000 0.000000 0.000000 1.000000 0.000000 0.500000 0.000000 0.500000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.142857 0.000000 0.000000 0.857143 0.000000 0.571429 0.000000 0.428571 1.000000 0.000000 0.000000 0.000000 0.571429 0.071429 0.285714 0.071429 0.000000 0.285714 0.000000 0.714286 0.214286 0.285714 0.071429 0.428571 0.357143 0.285714 0.142857 0.214286 0.142857 0.571429 0.214286 0.071429 0.285714 0.285714 0.000000 0.428571 0.071429 0.428571 0.500000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 regular expression -------------------------------------------------------------------------------- T[CT]ACAGT[CT]A[AG][TC][TCA][ACT][CG][TAC][GC] -------------------------------------------------------------------------------- Time 14.09 secs. ******************************************************************************** ******************************************************************************** MOTIF 3 MEME width = 21 sites = 5 llr = 106 E-value = 2.8e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif 3 Description -------------------------------------------------------------------------------- Simplified A :::::2::8::::::::::2: pos.-specific C a48:6:aa2::2::8::2a:2 probability G :22::8:::a8:22:8:4:8: matrix T :4:a4:::::288822a4::8 bits 2.2 * ** * * 1.9 * * ** * * * 1.7 * * ** * * * 1.5 * ** ** * * * Relative 1.3 * ** ****** ***** ** Entropy 1.1 * *************** *** (30.7 bits) 0.9 * *************** *** 0.6 * *************** *** 0.4 ********************* 0.2 ********************* 0.0 --------------------- Multilevel CCCTCGCCAGGTTTCGTGCGT consensus TG TA C TCGGTT T AC sequence G C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------------- 41374 278 5.86e-13 ATGGAAGTGC CTCTCGCCAGGTTTCGTTCGT CACAGTAAGT 50414 278 5.86e-13 ATGGAAGTGC CTCTCGCCAGGTTTCGTTCGT CATAGTCAGT 49251 109 3.58e-10 GTTCACACTA CCCTTGCCAGGCTTCTTGCAT GGTCTATTTG 43417 34 1.05e-09 GTTTGTTATT CGGTCACCAGGTTGTGTGCGT TTGAAAACAA 15730 72 1.10e-09 CGTTTTGCCT CCCTTGCCCGTTGTCGTCCGC CAGATCCGCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 41374 5.9e-13 277_[+3]_202 50414 5.9e-13 277_[+3]_202 49251 3.6e-10 108_[+3]_371 43417 1.1e-09 33_[+3]_446 15730 1.1e-09 71_[+3]_408 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 3 width=21 seqs=5 41374 ( 278) CTCTCGCCAGGTTTCGTTCGT 1 50414 ( 278) CTCTCGCCAGGTTTCGTTCGT 1 49251 ( 109) CCCTTGCCAGGCTTCTTGCAT 1 43417 ( 34) CGGTCACCAGGTTGTGTGCGT 1 15730 ( 72) CCCTTGCCCGTTGTCGTCCGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 14400 bayes= 10.9255 E= 2.8e+000 -897 213 -897 -897 -897 81 -17 53 -897 181 -17 -897 -897 -897 -897 185 -897 140 -897 53 -43 -897 183 -897 -897 213 -897 -897 -897 213 -897 -897 156 -19 -897 -897 -897 -897 215 -897 -897 -897 183 -47 -897 -19 -897 153 -897 -897 -17 153 -897 -897 -17 153 -897 181 -897 -47 -897 -897 183 -47 -897 -897 -897 185 -897 -19 83 53 -897 213 -897 -897 -43 -897 183 -897 -897 -19 -897 153 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 5 E= 2.8e+000 0.000000 1.000000 0.000000 0.000000 0.000000 0.400000 0.200000 0.400000 0.000000 0.800000 0.200000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.600000 0.000000 0.400000 0.200000 0.000000 0.800000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.800000 0.200000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.800000 0.200000 0.000000 0.200000 0.000000 0.800000 0.000000 0.000000 0.200000 0.800000 0.000000 0.000000 0.200000 0.800000 0.000000 0.800000 0.000000 0.200000 0.000000 0.000000 0.800000 0.200000 0.000000 0.000000 0.000000 1.000000 0.000000 0.200000 0.400000 0.400000 0.000000 1.000000 0.000000 0.000000 0.200000 0.000000 0.800000 0.000000 0.000000 0.200000 0.000000 0.800000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 regular expression -------------------------------------------------------------------------------- C[CTG][CG]T[CT][GA]CC[AC]G[GT][TC][TG][TG][CT][GT]T[GTC]C[GA][TC] -------------------------------------------------------------------------------- Time 20.40 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 9546 1.26e-01 500 47033 1.17e-05 257_[+2(2.20e-06)]_215_\ [+1(8.06e-07)] 47077 1.30e-03 28_[+2(2.34e-06)]_456 47553 7.74e-04 209_[+1(3.43e-05)]_248_\ [+2(1.69e-06)]_15 43417 1.15e-09 33_[+3(1.05e-09)]_106_\ [+2(1.98e-07)]_324 49064 6.38e-02 191_[+1(9.15e-06)]_297 15730 8.28e-06 71_[+3(1.10e-09)]_408 49251 1.63e-07 108_[+3(3.58e-10)]_196_\ [+1(2.82e-05)]_163 49591 1.67e-02 105_[+1(9.15e-06)]_122_\ [+1(4.90e-05)]_249 50056 5.44e-06 235_[+2(2.93e-09)]_99_\ [+1(4.90e-05)]_138 41130 4.00e-02 500 50281 7.11e-07 348_[+1(1.47e-07)]_17_\ [+1(1.44e-05)]_29_[+2(1.51e-07)]_66 6848 2.22e-01 500 50414 4.07e-16 234_[+1(6.67e-08)]_31_\ [+3(5.86e-13)]_24_[+2(9.77e-08)]_162 41374 4.07e-16 234_[+1(6.67e-08)]_31_\ [+3(5.86e-13)]_24_[+2(9.77e-08)]_162 10584 1.74e-02 74_[+1(1.44e-05)]_414 51609 9.24e-04 70_[+1(5.75e-05)]_183_\ [+2(2.48e-06)]_219 11217 2.01e-01 186_[+1(6.26e-05)]_302 11235 2.25e-01 500 41886 2.09e-05 28_[+2(3.02e-05)]_161_\ [+1(9.15e-06)]_221_[+2(9.77e-08)]_46 44982 7.20e-02 60_[+1(2.39e-05)]_428 45141 2.31e-05 176_[+3(6.14e-06)]_24_\ [+1(7.24e-07)]_61_[+1(2.01e-07)]_152_[+1(1.22e-06)]_30 48238 4.06e-05 135_[+2(1.76e-07)]_156_\ [+1(7.73e-06)]_181 46313 3.03e-02 159_[+1(7.73e-06)]_329 48616 1.10e-01 204_[+1(7.94e-05)]_284 47543 1.76e-04 30_[+2(6.03e-06)]_257_\ [+1(7.94e-05)]_167_[+1(1.50e-06)]_6 46890 9.35e-04 93_[+1(9.95e-05)]_52_[+2(8.14e-07)]_\ 327 35684 3.08e-04 192_[+1(6.67e-08)]_296 43508 2.85e-01 500 44923 7.40e-06 240_[+2(1.07e-06)]_88_\ [+2(6.95e-06)]_106_[+2(9.19e-05)]_5_[+1(3.49e-06)]_1 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because nmotifs = 3 reached. ******************************************************************************** CPU: seaotter.hsd1.wa.comcast.net ********************************************************************************