******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.10.0 (Release date: Wed May 21 10:35:36 2014 +1000) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net. This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme.nbcr.net. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= motifs/372/372.seqs.fa ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ 42519 1.0000 500 42893 1.0000 500 36969 1.0000 500 47169 1.0000 500 47594 1.0000 500 48178 1.0000 500 48191 1.0000 500 48717 1.0000 500 15482 1.0000 500 48887 1.0000 500 43432 1.0000 500 5857 1.0000 500 43656 1.0000 500 43711 1.0000 500 39949 1.0000 500 40238 1.0000 500 16147 1.0000 500 30925 1.0000 500 33116 1.0000 500 33568 1.0000 500 41418 1.0000 500 11084 1.0000 500 1473 1.0000 500 34413 1.0000 500 11826 1.0000 500 45789 1.0000 500 36109 1.0000 500 43951 1.0000 500 47172 1.0000 500 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme motifs/372/372.seqs.fa -oc motifs/372 -dna -minw 12 -maxw 21 -nmotifs 3 -maxsize 500000 model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 12 maxw= 21 minic= 0.00 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 29 wnsites= 0.8 theta: prob= 1 spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 14500 N= 29 strands: + sample: seed= 0 seqfrac= 1 Letter frequencies in dataset: A 0.252 C 0.240 G 0.240 T 0.268 Background letter frequencies (from dataset with add-one prior applied): A 0.252 C 0.240 G 0.240 T 0.268 ******************************************************************************** ******************************************************************************** MOTIF 1 MEME width = 16 sites = 28 llr = 252 E-value = 2.3e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif 1 Description -------------------------------------------------------------------------------- Simplified A 32595779::355246 pos.-specific C :5::::3182::2411 probability G 6431431:28721212 matrix T 1:2::::::::32242 bits 2.1 1.9 1.6 * 1.4 * ** Relative 1.2 * * *** Entropy 1.0 * * **** (13.0 bits) 0.8 ******** 0.6 ************ 0.4 ************ * 0.2 ************* ** 0.0 ---------------- Multilevel GCAAAAAACGGAACTA consensus AGG GGC CAT GA sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ---------------- 5857 189 1.34e-08 CTCTATGTTG GCAAAAAACGGGACAA ACGTGCTCGA 48178 167 3.02e-07 GATCGGTCGG GGGAGAAACCGAACAA GCTAACGAGG 33116 368 2.15e-06 TAGTCCTTTG GGGAGAAACGGTGGAA GGCTTTACTG 43432 355 2.49e-06 CTTTTCCAGA ACAAGGAACGGTACCA TGCCCATAGA 43711 91 3.76e-06 CTTTGGACGG ACGGGAAACGGAACTA TTCCAGTGGG 43656 401 7.11e-06 TATGATCCTG GCAAGAGACGGAATTG CTTACACTTA 48717 386 1.01e-05 ACCCACAGTC GCAAAAAACCGAGTTT GCGCATCTAC 36969 159 1.01e-05 GCGAAACAAA AAAAAGCACGGATCAA GCAGGGTTGG 36109 230 1.27e-05 TTACAGTTAA AAAAAAAACCGGAAAA CTTCCTCGTG 16147 192 1.27e-05 CGTTGTCGTC GGTAGAACCGGAACCA GACGACTCGT 43951 427 1.42e-05 TACATTATTT GGGAAGAACCGAATTG ATTTTAAGTA 34413 71 1.58e-05 GGTGTTGTGG GGGAAACAGGGTCCAA AGCTCCCGGA 48887 171 1.58e-05 TGACAGACGT GCAAAAACCGATGGAA AGTTGGTTCT 30925 348 1.75e-05 CGACCGATTG ACTAGGAACGAACGAA TCCATCCATC 33568 247 1.95e-05 TGCAGCAGAT GCAAAACAGGAGAAAA TATGCCAAAG 11826 379 2.89e-05 AAAACAACGC AAGAAGCACGGACGTA AAACCCGGAG 11084 280 2.89e-05 AATCGATTTG ACTAGAAACGAGCATA GAATTGACCG 15482 20 3.18e-05 AGTTGGTCAC GCAAAACCCGAAGATA CATCCCGATC 48191 222 4.19e-05 GTGGGGAGCT GAAAAACACGAGACAC TGACTCTAAA 45789 312 4.57e-05 CAGGTAAGAT TCAAGGAACGAATCTT GCAAGGTTAT 40238 420 4.57e-05 TCACGGTTTA TGAAAAACCGGAAATT TTTTTTTGCC 39949 288 6.96e-05 TTCTCGAACG GCAAGAAACCGTTTCG TTTGCTCGCA 47172 127 1.02e-04 AACATGCCGA GCGAAAAAGCAAACGG CAGTCCAGGC 41418 359 1.02e-04 TATTCGGTAA GGTAGACACGGTATGG TACTTTATGG 42893 441 1.18e-04 AATGCCTGAT AGTGAAAACGGTTTTA CGTGACAAAT 47594 103 1.26e-04 TAGAGTTGAG TGAAAGAAGGGACGAT TCGTCGACTT 42519 159 1.88e-04 GCCTAACAAT AAGACGAACGAAACTT TGGTCTACTG 1473 398 3.14e-04 TTGTACACTT GGAAGAGAGGGTTGTC CCTTTTGGTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 5857 1.3e-08 188_[+1]_296 48178 3e-07 166_[+1]_318 33116 2.1e-06 367_[+1]_117 43432 2.5e-06 354_[+1]_130 43711 3.8e-06 90_[+1]_394 43656 7.1e-06 400_[+1]_84 48717 1e-05 385_[+1]_99 36969 1e-05 158_[+1]_326 36109 1.3e-05 229_[+1]_255 16147 1.3e-05 191_[+1]_293 43951 1.4e-05 426_[+1]_58 34413 1.6e-05 70_[+1]_414 48887 1.6e-05 170_[+1]_314 30925 1.8e-05 347_[+1]_137 33568 1.9e-05 246_[+1]_238 11826 2.9e-05 378_[+1]_106 11084 2.9e-05 279_[+1]_205 15482 3.2e-05 19_[+1]_465 48191 4.2e-05 221_[+1]_263 45789 4.6e-05 311_[+1]_173 40238 4.6e-05 419_[+1]_65 39949 7e-05 287_[+1]_197 47172 0.0001 126_[+1]_358 41418 0.0001 358_[+1]_126 42893 0.00012 440_[+1]_44 47594 0.00013 102_[+1]_382 42519 0.00019 158_[+1]_326 1473 0.00031 397_[+1]_87 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 1 width=16 seqs=28 5857 ( 189) GCAAAAAACGGGACAA 1 48178 ( 167) GGGAGAAACCGAACAA 1 33116 ( 368) GGGAGAAACGGTGGAA 1 43432 ( 355) ACAAGGAACGGTACCA 1 43711 ( 91) ACGGGAAACGGAACTA 1 43656 ( 401) GCAAGAGACGGAATTG 1 48717 ( 386) GCAAAAAACCGAGTTT 1 36969 ( 159) AAAAAGCACGGATCAA 1 36109 ( 230) AAAAAAAACCGGAAAA 1 16147 ( 192) GGTAGAACCGGAACCA 1 43951 ( 427) GGGAAGAACCGAATTG 1 34413 ( 71) GGGAAACAGGGTCCAA 1 48887 ( 171) GCAAAAACCGATGGAA 1 30925 ( 348) ACTAGGAACGAACGAA 1 33568 ( 247) GCAAAACAGGAGAAAA 1 11826 ( 379) AAGAAGCACGGACGTA 1 11084 ( 280) ACTAGAAACGAGCATA 1 15482 ( 20) GCAAAACCCGAAGATA 1 48191 ( 222) GAAAAACACGAGACAC 1 45789 ( 312) TCAAGGAACGAATCTT 1 40238 ( 420) TGAAAAACCGGAAATT 1 39949 ( 288) GCAAGAAACCGTTTCG 1 47172 ( 127) GCGAAAAAGCAAACGG 1 41418 ( 359) GGTAGACACGGTATGG 1 42893 ( 441) AGTGAAAACGGTTTTA 1 47594 ( 103) TGAAAGAAGGGACGAT 1 42519 ( 159) AAGACGAACGAAACTT 1 1473 ( 398) GGAAGAGAGGGTTGTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 14065 bayes= 9.5763 E= 2.3e+000 35 -1145 125 -132 -50 95 57 -1145 109 -1145 25 -59 188 -1145 -175 -1145 109 -274 84 -1145 150 -1145 25 -1145 143 6 -175 -1145 177 -75 -1145 -1145 -1145 178 -43 -1145 -1145 -16 171 -1145 35 -1145 150 -1145 109 -1145 -43 9 99 -43 -75 -59 -50 71 -16 -32 64 -116 -175 68 118 -175 -43 -59 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 28 E= 2.3e+000 0.321429 0.000000 0.571429 0.107143 0.178571 0.464286 0.357143 0.000000 0.535714 0.000000 0.285714 0.178571 0.928571 0.000000 0.071429 0.000000 0.535714 0.035714 0.428571 0.000000 0.714286 0.000000 0.285714 0.000000 0.678571 0.250000 0.071429 0.000000 0.857143 0.142857 0.000000 0.000000 0.000000 0.821429 0.178571 0.000000 0.000000 0.214286 0.785714 0.000000 0.321429 0.000000 0.678571 0.000000 0.535714 0.000000 0.178571 0.285714 0.500000 0.178571 0.142857 0.178571 0.178571 0.392857 0.214286 0.214286 0.392857 0.107143 0.071429 0.428571 0.571429 0.071429 0.178571 0.178571 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 regular expression -------------------------------------------------------------------------------- [GA][CG][AG]A[AG][AG][AC]AC[GC][GA][AT]A[CGT][TA]A -------------------------------------------------------------------------------- Time 7.36 secs. ******************************************************************************** ******************************************************************************** MOTIF 2 MEME width = 16 sites = 8 llr = 115 E-value = 1.6e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif 2 Description -------------------------------------------------------------------------------- Simplified A :::::1111:::84:: pos.-specific C a1a8:3::9:49:15: probability G :6:3a39::a61:119 matrix T :3:::4:9::::3441 bits 2.1 * * * * 1.9 * * * * 1.6 * * * * 1.4 * * * **** * * Relative 1.2 * *** **** ** * Entropy 1.0 * *** ******* * (20.7 bits) 0.8 * *** ******* * 0.6 ***** ******* ** 0.4 ***** ******* ** 0.2 ***** ********** 0.0 ---------------- Multilevel CGCCGTGTCGGCAACG consensus T G C C TTT sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ---------------- 43432 171 9.54e-09 CTGAGTTCGT CGCCGGGTCGGCAGCG TCTTGGTCTG 16147 307 3.12e-08 TGTACGACGG CGCCGAGTCGGCTACG CACCCGCACG 5857 324 7.94e-08 TGTAATTGGG CGCGGTGTCGCCATGG AAGCCTTGCA 1473 237 1.13e-07 TTGTTTATAT CTCCGCGTAGGCATCG CTTGCCGAAA 47169 180 1.90e-07 TGCCGCCAAA CGCCGCGTCGGGTTTG CTCCGTTCAC 39949 468 2.09e-07 ATTCACGCTC CGCCGTATCGCCACTG TGACGTGATA 15482 53 2.95e-07 ATCCTGATCA CTCGGGGACGGCAACG ATAGCCGAGA 41418 250 3.71e-07 ATCCTCCTCT CCCCGTGTCGCCAATT TCGAAGACGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 43432 9.5e-09 170_[+2]_314 16147 3.1e-08 306_[+2]_178 5857 7.9e-08 323_[+2]_161 1473 1.1e-07 236_[+2]_248 47169 1.9e-07 179_[+2]_305 39949 2.1e-07 467_[+2]_17 15482 3e-07 52_[+2]_432 41418 3.7e-07 249_[+2]_235 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 2 width=16 seqs=8 43432 ( 171) CGCCGGGTCGGCAGCG 1 16147 ( 307) CGCCGAGTCGGCTACG 1 5857 ( 324) CGCGGTGTCGCCATGG 1 1473 ( 237) CTCCGCGTAGGCATCG 1 47169 ( 180) CGCCGCGTCGGGTTTG 1 39949 ( 468) CGCCGTATCGCCACTG 1 15482 ( 53) CTCGGGGACGGCAACG 1 41418 ( 250) CCCCGTGTCGCCAATT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 14065 bayes= 10.779 E= 1.6e+001 -965 206 -965 -965 -965 -94 138 -10 -965 206 -965 -965 -965 164 6 -965 -965 -965 206 -965 -101 6 6 48 -101 -965 186 -965 -101 -965 -965 170 -101 187 -965 -965 -965 -965 206 -965 -965 64 138 -965 -965 187 -94 -965 157 -965 -965 -10 57 -94 -94 48 -965 106 -94 48 -965 -965 186 -110 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 8 E= 1.6e+001 0.000000 1.000000 0.000000 0.000000 0.000000 0.125000 0.625000 0.250000 0.000000 1.000000 0.000000 0.000000 0.000000 0.750000 0.250000 0.000000 0.000000 0.000000 1.000000 0.000000 0.125000 0.250000 0.250000 0.375000 0.125000 0.000000 0.875000 0.000000 0.125000 0.000000 0.000000 0.875000 0.125000 0.875000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.375000 0.625000 0.000000 0.000000 0.875000 0.125000 0.000000 0.750000 0.000000 0.000000 0.250000 0.375000 0.125000 0.125000 0.375000 0.000000 0.500000 0.125000 0.375000 0.000000 0.000000 0.875000 0.125000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 regular expression -------------------------------------------------------------------------------- C[GT]C[CG]G[TCG]GTCG[GC]C[AT][AT][CT]G -------------------------------------------------------------------------------- Time 13.80 secs. ******************************************************************************** ******************************************************************************** MOTIF 3 MEME width = 16 sites = 11 llr = 146 E-value = 4.8e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif 3 Description -------------------------------------------------------------------------------- Simplified A 382526:a:a:5:a:2 pos.-specific C 728:2:7:8:5:9:43 probability G :::55:::2:4:1:5: matrix T ::::243:::15::15 bits 2.1 * * * 1.9 * * * 1.6 * * ** 1.4 * *** ** Relative 1.2 *** **** ** Entropy 1.0 **** ***** *** (19.1 bits) 0.8 **** ********** 0.6 **** *********** 0.4 **** *********** 0.2 **************** 0.0 ---------------- Multilevel CACGGACACACACAGT consensus A A TT GT CC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ---------------- 47594 387 1.35e-08 CGCGCACACA CACGTACACACACACT CTCACCCCGA 48191 327 1.61e-08 GTAATTGTCC CACAGTCACAGTCAGT CAGCATACTT 41418 35 9.60e-08 CGACCAGAGA CACACACACACACACA CATGTGACCT 33116 482 1.08e-07 TGGTTTGGTG CACACATACACACACT CGG 11826 327 1.92e-07 TCGATCCTTT CCCAGTCACAGTCAGT CAACTATACT 34413 165 2.39e-07 TGAGTAGATA AACGGATACACACAGA GCTAGTGGCC 33568 394 3.86e-07 AAAACTTTGT CACGGATACATACAGC AAGAACCGTG 42519 271 5.06e-07 ATGAAATATT AACGGTCAGACACAGC CGCCGAAGAA 36109 377 1.72e-06 TTAGTCGCAG CAAGATCAGAGTCAGT CGATCGTTGC 47169 472 2.53e-06 CGAGTGGAAT CCCAAACACAGTGACT TGACTTACGT 30925 309 3.21e-06 TAGTTAACTG AAAGTACACACTCATC GAACCGACCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 47594 1.3e-08 386_[+3]_98 48191 1.6e-08 326_[+3]_158 41418 9.6e-08 34_[+3]_450 33116 1.1e-07 481_[+3]_3 11826 1.9e-07 326_[+3]_158 34413 2.4e-07 164_[+3]_320 33568 3.9e-07 393_[+3]_91 42519 5.1e-07 270_[+3]_214 36109 1.7e-06 376_[+3]_108 47169 2.5e-06 471_[+3]_13 30925 3.2e-06 308_[+3]_176 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 3 width=16 seqs=11 47594 ( 387) CACGTACACACACACT 1 48191 ( 327) CACAGTCACAGTCAGT 1 41418 ( 35) CACACACACACACACA 1 33116 ( 482) CACACATACACACACT 1 11826 ( 327) CCCAGTCACAGTCAGT 1 34413 ( 165) AACGGATACACACAGA 1 33568 ( 394) CACGGATACATACAGC 1 42519 ( 271) AACGGTCAGACACAGC 1 36109 ( 377) CAAGATCAGAGTCAGT 1 47169 ( 472) CCCAAACACAGTGACT 1 30925 ( 309) AAAGTACACACTCATC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 14065 bayes= 10.6746 E= 4.8e+000 12 160 -1010 -1010 170 -40 -1010 -1010 -47 177 -1010 -1010 85 -1010 118 -1010 -47 -40 92 -56 134 -1010 -1010 44 -1010 160 -1010 2 199 -1010 -1010 -1010 -1010 177 -40 -1010 199 -1010 -1010 -1010 -1010 118 60 -156 111 -1010 -1010 76 -1010 192 -140 -1010 199 -1010 -1010 -1010 -1010 60 118 -156 -47 19 -1010 102 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 11 E= 4.8e+000 0.272727 0.727273 0.000000 0.000000 0.818182 0.181818 0.000000 0.000000 0.181818 0.818182 0.000000 0.000000 0.454545 0.000000 0.545455 0.000000 0.181818 0.181818 0.454545 0.181818 0.636364 0.000000 0.000000 0.363636 0.000000 0.727273 0.000000 0.272727 1.000000 0.000000 0.000000 0.000000 0.000000 0.818182 0.181818 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.545455 0.363636 0.090909 0.545455 0.000000 0.000000 0.454545 0.000000 0.909091 0.090909 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.363636 0.545455 0.090909 0.181818 0.272727 0.000000 0.545455 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 regular expression -------------------------------------------------------------------------------- [CA]AC[GA]G[AT][CT]ACA[CG][AT]CA[GC][TC] -------------------------------------------------------------------------------- Time 20.35 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 42519 1.24e-03 270_[+3(5.06e-07)]_214 42893 2.23e-01 500 36969 1.19e-02 158_[+1(1.01e-05)]_326 47169 7.57e-06 179_[+2(1.90e-07)]_276_\ [+3(2.53e-06)]_13 47594 1.19e-05 386_[+3(1.35e-08)]_98 48178 1.22e-03 166_[+1(3.02e-07)]_318 48191 1.48e-05 221_[+1(4.19e-05)]_89_\ [+3(1.61e-08)]_158 48717 7.38e-02 385_[+1(1.01e-05)]_99 15482 1.93e-04 19_[+1(3.18e-05)]_17_[+2(2.95e-07)]_\ 432 48887 7.06e-02 170_[+1(1.58e-05)]_314 43432 1.10e-06 170_[+2(9.54e-09)]_168_\ [+1(2.49e-06)]_130 5857 6.19e-08 188_[+1(1.34e-08)]_119_\ [+2(7.94e-08)]_161 43656 2.16e-02 400_[+1(7.11e-06)]_84 43711 3.07e-03 90_[+1(3.76e-06)]_240_\ [+2(6.47e-05)]_138 39949 2.78e-04 287_[+1(6.96e-05)]_164_\ [+2(2.09e-07)]_17 40238 1.18e-01 419_[+1(4.57e-05)]_65 16147 1.23e-05 191_[+1(1.27e-05)]_99_\ [+2(3.12e-08)]_178 30925 8.69e-04 308_[+3(3.21e-06)]_23_\ [+1(1.75e-05)]_137 33116 2.41e-06 367_[+1(2.15e-06)]_98_\ [+3(1.08e-07)]_3 33568 1.48e-04 246_[+1(1.95e-05)]_131_\ [+3(3.86e-07)]_91 41418 1.04e-07 34_[+3(9.60e-08)]_199_\ [+2(3.71e-07)]_235 11084 1.52e-01 279_[+1(2.89e-05)]_205 1473 5.45e-04 236_[+2(1.13e-07)]_248 34413 8.74e-05 70_[+1(1.58e-05)]_78_[+3(2.39e-07)]_\ 320 11826 1.16e-04 326_[+3(1.92e-07)]_36_\ [+1(2.89e-05)]_106 45789 2.00e-01 311_[+1(4.57e-05)]_173 36109 3.90e-04 229_[+1(1.27e-05)]_131_\ [+3(1.72e-06)]_108 43951 2.51e-02 426_[+1(1.42e-05)]_58 47172 1.89e-01 500 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because nmotifs = 3 reached. ******************************************************************************** CPU: seaotter.hsd1.wa.comcast.net ********************************************************************************