******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.10.0 (Release date: Wed May 21 10:35:36 2014 +1000) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net. This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme.nbcr.net. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= motifs/380/380.seqs.fa ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ 9321 1.0000 500 31939 1.0000 500 46464 1.0000 500 46703 1.0000 500 47155 1.0000 500 21970 1.0000 500 47892 1.0000 500 14983 1.0000 500 49451 1.0000 500 49486 1.0000 500 16067 1.0000 500 16343 1.0000 500 50327 1.0000 500 4227 1.0000 500 44426 1.0000 500 5532 1.0000 500 45192 1.0000 500 32041 1.0000 500 42950 1.0000 500 34636 1.0000 500 45080 1.0000 500 46044 1.0000 500 46236 1.0000 500 45939 1.0000 500 45586 1.0000 500 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme motifs/380/380.seqs.fa -oc motifs/380 -dna -minw 12 -maxw 21 -nmotifs 3 -maxsize 500000 model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 12 maxw= 21 minic= 0.00 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 25 wnsites= 0.8 theta: prob= 1 spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 12500 N= 25 strands: + sample: seed= 0 seqfrac= 1 Letter frequencies in dataset: A 0.269 C 0.243 G 0.227 T 0.261 Background letter frequencies (from dataset with add-one prior applied): A 0.269 C 0.243 G 0.227 T 0.261 ******************************************************************************** ******************************************************************************** MOTIF 1 MEME width = 12 sites = 20 llr = 184 E-value = 6.6e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif 1 Description -------------------------------------------------------------------------------- Simplified A 621:7:8::584 pos.-specific C 22::3a::::25 probability G 1:16::2a24:2 matrix T 2794::1:92:: bits 2.1 * * 1.9 * * 1.7 * * 1.5 * * Relative 1.3 * * ** * Entropy 1.1 **** ** * (13.3 bits) 0.9 ******** * 0.6 ********** 0.4 ************ 0.2 ************ 0.0 ------------ Multilevel ATTGACAGTAAC consensus TC GCA sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------ 46703 384 6.43e-08 CACGCCCGAA ATTGACAGTGAC CACAAGTCGG 50327 146 1.99e-06 GTTCGGACTT CTTGACAGTAAC TGTAAACTTG 34636 134 2.94e-06 CTTATCCGTT ATTTACAGTTAC CAAGAAAACG 47892 169 2.94e-06 TACTACAACG ATTTACAGTTAC ATCAACCGAA 49451 198 3.71e-06 AGAACTACCT ATTGACGGTAAA ATATTGTTTG 47155 196 4.99e-06 TGGGATAGCG ATTGCCAGTGCC AAAAAACGTC 45192 425 6.66e-06 GACATACAGA ATTGACGGTGAG CCATGAAAAT 49486 406 1.14e-05 CAATTTTGCT ATTTACAGTACG TTATTCACTG 44426 272 1.28e-05 ACTCACAGTC AATGCCAGTAAA ATATCCGACG 46236 211 1.57e-05 TAAACAAGGA CTTTCCAGTGAA ACATACTTTC 45080 245 2.12e-05 GTTGGATCGT ATTTCCAGGGAA AAGGCATGTG 45939 145 3.40e-05 GGCGAAAAGC CATTACAGTAAC ACTTTCAAAA 16067 9 4.37e-05 ACCCGCCA TTTGCCGGTAAA AATCACCGAG 31939 23 4.37e-05 TTGTTGTAAT GTTGACTGTGAA TGGCCCAGCC 46044 294 5.09e-05 CAAGAAACAA ATGGACAGTACC GACCGTGACT 45586 32 5.46e-05 AATGGCAACA ATAGACAGTGCC AGCAGGGGGG 16343 251 8.44e-05 ATTATACCAT ACTGCCAGGAAG CAGCTACCTT 5532 331 9.58e-05 TCGAAGAGGG GCTGACAGGAAC ACAACCAAAC 42950 204 1.31e-04 CTGTTTCTTA TATTACAGTTAG TTTCCCAGGC 46464 127 1.62e-04 ATAACCGAAT TCTTACTGTGAA CGAATCTCGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 46703 6.4e-08 383_[+1]_105 50327 2e-06 145_[+1]_343 34636 2.9e-06 133_[+1]_355 47892 2.9e-06 168_[+1]_320 49451 3.7e-06 197_[+1]_291 47155 5e-06 195_[+1]_293 45192 6.7e-06 424_[+1]_64 49486 1.1e-05 405_[+1]_83 44426 1.3e-05 271_[+1]_217 46236 1.6e-05 210_[+1]_278 45080 2.1e-05 244_[+1]_244 45939 3.4e-05 144_[+1]_344 16067 4.4e-05 8_[+1]_480 31939 4.4e-05 22_[+1]_466 46044 5.1e-05 293_[+1]_195 45586 5.5e-05 31_[+1]_457 16343 8.4e-05 250_[+1]_238 5532 9.6e-05 330_[+1]_158 42950 0.00013 203_[+1]_285 46464 0.00016 126_[+1]_362 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 1 width=12 seqs=20 46703 ( 384) ATTGACAGTGAC 1 50327 ( 146) CTTGACAGTAAC 1 34636 ( 134) ATTTACAGTTAC 1 47892 ( 169) ATTTACAGTTAC 1 49451 ( 198) ATTGACGGTAAA 1 47155 ( 196) ATTGCCAGTGCC 1 45192 ( 425) ATTGACGGTGAG 1 49486 ( 406) ATTTACAGTACG 1 44426 ( 272) AATGCCAGTAAA 1 46236 ( 211) CTTTCCAGTGAA 1 45080 ( 245) ATTTCCAGGGAA 1 45939 ( 145) CATTACAGTAAC 1 16067 ( 9) TTTGCCGGTAAA 1 31939 ( 23) GTTGACTGTGAA 1 46044 ( 294) ATGGACAGTACC 1 45586 ( 32) ATAGACAGTGCC 1 16343 ( 251) ACTGCCAGGAAG 1 5532 ( 331) GCTGACAGGAAC 1 42950 ( 204) TATTACAGTTAG 1 46464 ( 127) TCTTACTGTGAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 12225 bayes= 10.1978 E= 6.6e+001 116 -70 -118 -80 -84 -70 -1097 142 -242 -1097 -218 179 -1097 -1097 140 62 138 30 -1097 -1097 -1097 204 -1097 -1097 148 -1097 -60 -138 -1097 -1097 214 -1097 -1097 -1097 -60 170 74 -1097 82 -80 157 -28 -1097 -1097 38 89 -18 -1097 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 20 E= 6.6e+001 0.600000 0.150000 0.100000 0.150000 0.150000 0.150000 0.000000 0.700000 0.050000 0.000000 0.050000 0.900000 0.000000 0.000000 0.600000 0.400000 0.700000 0.300000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.750000 0.000000 0.150000 0.100000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.150000 0.850000 0.450000 0.000000 0.400000 0.150000 0.800000 0.200000 0.000000 0.000000 0.350000 0.450000 0.200000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 regular expression -------------------------------------------------------------------------------- ATT[GT][AC]CAGT[AG][AC][CAG] -------------------------------------------------------------------------------- Time 5.37 secs. ******************************************************************************** ******************************************************************************** MOTIF 2 MEME width = 12 sites = 19 llr = 181 E-value = 7.9e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif 2 Description -------------------------------------------------------------------------------- Simplified A :12::31:::3: pos.-specific C :3:92::31a11 probability G :2::33::::41 matrix T a58154979:28 bits 2.1 * 1.9 * * 1.7 * * * 1.5 * * * ** Relative 1.3 * ** * ** * Entropy 1.1 * ** **** * (13.7 bits) 0.9 * ** **** * 0.6 * ** **** * 0.4 * ******** * 0.2 ************ 0.0 ------------ Multilevel TTTCTTTTTCGT consensus C GA C A sequence CG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------ 46464 458 6.29e-07 TACCATTTTC TCTCGTTTTCGT CCGACTTGCA 45939 216 1.41e-06 GCTTCAAAAT TGTCTTTTTCGT TTCGTCTGTC 42950 191 3.43e-06 AACTACCGTT TTTCTGTTTCTT ATATTACAGT 44426 444 3.43e-06 TGCACTGGTT TCTCCATTTCGT AGGAATCCGG 47892 227 3.43e-06 CGGTCGACGT TCTCGATTTCAT TTCCATTGTA 45586 261 8.37e-06 TTTAATATAA TCTCTGTTTCCT TAACTAAAAT 49451 86 9.27e-06 GAATGGGTTT TTTCTTTTTCAG AGCAAAATCA 46044 380 1.43e-05 AAGACGATCT TTTCGGTCTCTT CTCGCTCCTC 45080 151 1.43e-05 CTGTCCGAAT TCACGGTTTCGT TAAGGACTGT 32041 181 2.28e-05 GAATATTTGC TTACTTTTTCCT AGGTAAATCG 49486 6 2.86e-05 ACGTC TTTTTTTTTCAT TGTATCGTAT 16343 424 3.17e-05 TTGCCACTTC TTTCTAACTCGT GACGATCCTC 34636 312 3.39e-05 TACGCGAAGC TCACCATTTCAT TACGGTCTAC 50327 424 3.64e-05 TGGTCGACTC TGTCGATTCCGT TATGGTCACG 31939 222 3.97e-05 CGTATCGGCA TTTCCTTCCCGT AGAATTCGAC 46236 313 4.27e-05 GCGCAGTAAC TATCGATCTCGT CAAACCCGTG 16067 328 4.27e-05 CCAGACGCGA TTTCCTTTTCAC AGCAACTGAC 45192 123 4.58e-05 CGGATGGGCT TGTCTTTTTCTG AGATCTTCCA 5532 9 4.58e-05 GTACCTTC TTTCTGACTCAT GGTTAGTTTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 46464 6.3e-07 457_[+2]_31 45939 1.4e-06 215_[+2]_273 42950 3.4e-06 190_[+2]_298 44426 3.4e-06 443_[+2]_45 47892 3.4e-06 226_[+2]_262 45586 8.4e-06 260_[+2]_228 49451 9.3e-06 85_[+2]_403 46044 1.4e-05 379_[+2]_109 45080 1.4e-05 150_[+2]_338 32041 2.3e-05 180_[+2]_308 49486 2.9e-05 5_[+2]_483 16343 3.2e-05 423_[+2]_65 34636 3.4e-05 311_[+2]_177 50327 3.6e-05 423_[+2]_65 31939 4e-05 221_[+2]_267 46236 4.3e-05 312_[+2]_176 16067 4.3e-05 327_[+2]_161 45192 4.6e-05 122_[+2]_366 5532 4.6e-05 8_[+2]_480 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 2 width=12 seqs=19 46464 ( 458) TCTCGTTTTCGT 1 45939 ( 216) TGTCTTTTTCGT 1 42950 ( 191) TTTCTGTTTCTT 1 44426 ( 444) TCTCCATTTCGT 1 47892 ( 227) TCTCGATTTCAT 1 45586 ( 261) TCTCTGTTTCCT 1 49451 ( 86) TTTCTTTTTCAG 1 46044 ( 380) TTTCGGTCTCTT 1 45080 ( 151) TCACGGTTTCGT 1 32041 ( 181) TTACTTTTTCCT 1 49486 ( 6) TTTTTTTTTCAT 1 16343 ( 424) TTTCTAACTCGT 1 34636 ( 312) TCACCATTTCAT 1 50327 ( 424) TGTCGATTCCGT 1 31939 ( 222) TTTCCTTCCCGT 1 46236 ( 313) TATCGATCTCGT 1 16067 ( 328) TTTCCTTTTCAC 1 45192 ( 123) TGTCTTTTTCTG 1 5532 ( 9) TTTCTGACTCAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 12225 bayes= 10.2258 E= 7.9e-001 -1089 -1089 -1089 194 -235 38 -53 86 -77 -1089 -1089 169 -1089 196 -1089 -231 -1089 -21 47 86 23 -1089 21 69 -135 -1089 -1089 178 -1089 12 -1089 150 -1089 -121 -1089 178 -1089 204 -1089 -1089 23 -121 89 -72 -1089 -220 -111 169 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 19 E= 7.9e-001 0.000000 0.000000 0.000000 1.000000 0.052632 0.315789 0.157895 0.473684 0.157895 0.000000 0.000000 0.842105 0.000000 0.947368 0.000000 0.052632 0.000000 0.210526 0.315789 0.473684 0.315789 0.000000 0.263158 0.421053 0.105263 0.000000 0.000000 0.894737 0.000000 0.263158 0.000000 0.736842 0.000000 0.105263 0.000000 0.894737 0.000000 1.000000 0.000000 0.000000 0.315789 0.105263 0.421053 0.157895 0.000000 0.052632 0.105263 0.842105 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 regular expression -------------------------------------------------------------------------------- T[TC]TC[TGC][TAG]T[TC]TC[GA]T -------------------------------------------------------------------------------- Time 10.45 secs. ******************************************************************************** ******************************************************************************** MOTIF 3 MEME width = 15 sites = 10 llr = 123 E-value = 6.1e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif 3 Description -------------------------------------------------------------------------------- Simplified A :13:::4::9::1:: pos.-specific C 15::a:2191424:9 probability G ::7::9231:531:1 matrix T 94:a:126::154a: bits 2.1 * 1.9 ** * 1.7 *** * 1.5 * *** ** ** Relative 1.3 * **** ** ** Entropy 1.1 * **** ** ** (17.8 bits) 0.9 * **** ** ** 0.6 ****** **** ** 0.4 ****** ***** ** 0.2 ****** ******** 0.0 --------------- Multilevel TCGTCGATCAGTCTC consensus TA CG CGT sequence G C T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------- 21970 237 2.80e-08 CACTATCAGA TCGTCGAGCACTCTC ATTGCCGTAC 44426 127 9.85e-08 ACGAATGAAC TTGTCGATCACCTTC CAACAAGCCA 45939 311 1.26e-07 TGCACGGCCA TCATCGTTCAGTCTC TTGTCATTAC 9321 64 3.72e-07 TGGCTAGAGC TCGTCGATGAGGCTC GTAAGGTGCC 16067 216 5.60e-07 GTCGGCCGAC TTGTCGGGCAGTATC ACCGAACTCA 5532 100 1.14e-06 TAGTATTCCG TTGTCTCTCACTCTC AGGTGCAGTA 46236 158 1.32e-06 GCTGTTACTG TCATCGGCCACTTTC ACTGGTCACC 14983 430 3.28e-06 TGTAGCGCTC TAGTCGATCCGCTTC TGCACTTTTC 16343 59 4.46e-06 CGAATCTTCA TCATCGTTCATGGTC TTTCGAATCG 50327 13 8.80e-06 TGTCCAATCC CTGTCGCGCAGGTTG ATCCTGTTCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 21970 2.8e-08 236_[+3]_249 44426 9.8e-08 126_[+3]_359 45939 1.3e-07 310_[+3]_175 9321 3.7e-07 63_[+3]_422 16067 5.6e-07 215_[+3]_270 5532 1.1e-06 99_[+3]_386 46236 1.3e-06 157_[+3]_328 14983 3.3e-06 429_[+3]_56 16343 4.5e-06 58_[+3]_427 50327 8.8e-06 12_[+3]_473 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 3 width=15 seqs=10 21970 ( 237) TCGTCGAGCACTCTC 1 44426 ( 127) TTGTCGATCACCTTC 1 45939 ( 311) TCATCGTTCAGTCTC 1 9321 ( 64) TCGTCGATGAGGCTC 1 16067 ( 216) TTGTCGGGCAGTATC 1 5532 ( 100) TTGTCTCTCACTCTC 1 46236 ( 158) TCATCGGCCACTTTC 1 14983 ( 430) TAGTCGATCCGCTTC 1 16343 ( 59) TCATCGTTCATGGTC 1 50327 ( 13) CTGTCGCGCAGGTTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 12150 bayes= 9.67938 E= 6.1e+002 -997 -128 -997 178 -142 104 -997 62 16 -997 162 -997 -997 -997 -997 194 -997 204 -997 -997 -997 -997 198 -138 57 -28 -18 -38 -997 -128 40 120 -997 189 -118 -997 174 -128 -997 -997 -997 72 114 -138 -997 -28 40 94 -142 72 -118 62 -997 -997 -997 194 -997 189 -118 -997 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 10 E= 6.1e+002 0.000000 0.100000 0.000000 0.900000 0.100000 0.500000 0.000000 0.400000 0.300000 0.000000 0.700000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.900000 0.100000 0.400000 0.200000 0.200000 0.200000 0.000000 0.100000 0.300000 0.600000 0.000000 0.900000 0.100000 0.000000 0.900000 0.100000 0.000000 0.000000 0.000000 0.400000 0.500000 0.100000 0.000000 0.200000 0.300000 0.500000 0.100000 0.400000 0.100000 0.400000 0.000000 0.000000 0.000000 1.000000 0.000000 0.900000 0.100000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 regular expression -------------------------------------------------------------------------------- T[CT][GA]TCG[ACGT][TG]CA[GC][TGC][CT]TC -------------------------------------------------------------------------------- Time 15.24 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 9321 1.36e-03 63_[+3(3.72e-07)]_422 31939 2.36e-03 22_[+1(4.37e-05)]_187_\ [+2(3.97e-05)]_267 46464 1.01e-03 457_[+2(6.29e-07)]_31 46703 1.61e-03 383_[+1(6.43e-08)]_105 47155 8.39e-03 195_[+1(4.99e-06)]_293 21970 4.56e-04 236_[+3(2.80e-08)]_249 47892 5.79e-05 168_[+1(2.94e-06)]_46_\ [+2(3.43e-06)]_262 14983 1.28e-02 429_[+3(3.28e-06)]_56 49451 1.64e-04 85_[+2(9.27e-06)]_100_\ [+1(3.71e-06)]_6_[+1(9.65e-06)]_273 49486 2.71e-03 5_[+2(2.86e-05)]_388_[+1(1.14e-05)]_\ 83 16067 1.71e-05 8_[+1(4.37e-05)]_195_[+3(5.60e-07)]_\ 97_[+2(4.27e-05)]_161 16343 1.42e-04 58_[+3(4.46e-06)]_177_\ [+1(8.44e-05)]_161_[+2(3.17e-05)]_65 50327 1.11e-05 12_[+3(8.80e-06)]_92_[+1(1.57e-05)]_\ 14_[+1(1.99e-06)]_13_[+1(4.05e-05)]_241_[+2(3.64e-05)]_65 4227 5.12e-01 500 44426 1.26e-07 126_[+3(9.85e-08)]_130_\ [+1(1.28e-05)]_160_[+2(3.43e-06)]_45 5532 6.67e-05 8_[+2(4.58e-05)]_79_[+3(1.14e-06)]_\ 216_[+1(9.58e-05)]_158 45192 1.53e-03 122_[+2(4.58e-05)]_290_\ [+1(6.66e-06)]_64 32041 2.99e-02 180_[+2(2.28e-05)]_308 42950 1.14e-03 190_[+2(3.43e-06)]_298 34636 5.34e-04 133_[+1(2.94e-06)]_60_\ [+1(4.75e-05)]_94_[+2(3.39e-05)]_165_[+1(5.09e-05)] 45080 2.26e-04 150_[+2(1.43e-05)]_82_\ [+1(2.12e-05)]_103_[+3(6.71e-05)]_126 46044 1.61e-03 293_[+1(5.09e-05)]_74_\ [+2(1.43e-05)]_109 46236 1.49e-05 157_[+3(1.32e-06)]_38_\ [+1(1.57e-05)]_90_[+2(4.27e-05)]_176 45939 1.70e-07 144_[+1(3.40e-05)]_59_\ [+2(1.41e-06)]_83_[+3(1.26e-07)]_175 45586 5.20e-03 31_[+1(5.46e-05)]_217_\ [+2(8.37e-06)]_228 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because nmotifs = 3 reached. ******************************************************************************** CPU: seaotter.hsd1.wa.comcast.net ********************************************************************************