******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.10.0 (Release date: Wed May 21 10:35:36 2014 +1000) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net. This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme.nbcr.net. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= motifs/12/12.seqs.fa ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ 12055 1.0000 500 1807 1.0000 500 21591 1.0000 500 23620 1.0000 500 25166 1.0000 500 261641 1.0000 500 263287 1.0000 500 263883 1.0000 500 264384 1.0000 500 268242 1.0000 500 269653 1.0000 500 269876 1.0000 500 26991 1.0000 500 270291 1.0000 500 270300 1.0000 500 28025 1.0000 500 34094 1.0000 500 37934 1.0000 500 3898 1.0000 500 5362 1.0000 500 821 1.0000 500 8903 1.0000 500 8959 1.0000 500 9763 1.0000 500 bd884 1.0000 500 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme motifs/12/12.seqs.fa -oc motifs/12 -dna -minw 12 -maxw 21 -nmotifs 3 -maxsize 500000 model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 12 maxw= 21 minic= 0.00 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 25 wnsites= 0.8 theta: prob= 1 spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 12500 N= 25 strands: + sample: seed= 0 seqfrac= 1 Letter frequencies in dataset: A 0.259 C 0.240 G 0.235 T 0.266 Background letter frequencies (from dataset with add-one prior applied): A 0.259 C 0.240 G 0.235 T 0.266 ******************************************************************************** ******************************************************************************** MOTIF 1 MEME width = 19 sites = 13 llr = 199 E-value = 1.9e-011 ******************************************************************************** -------------------------------------------------------------------------------- Motif 1 Description -------------------------------------------------------------------------------- Simplified A :12::29:2:222:11::: pos.-specific C :::2:::262:5116:6:: probability G 19:1a:181:6::6::444 matrix T 9:88:8::18238339:66 bits 2.1 * 1.9 * 1.7 * * * 1.5 ** * ** * Relative 1.3 *** **** * * Entropy 1.0 ******** * **** (22.1 bits) 0.8 ******** * ******* 0.6 *********** ******* 0.4 ******************* 0.2 ******************* 0.0 ------------------- Multilevel TGTTGTAGCTGCTGCTCTT consensus A AT TT GGG sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------------- 37934 179 1.43e-10 CAAGGGTGGG TGTTGTAGATGCTGCTCTG CTATCTCATG 270300 178 1.43e-10 CAAGGGTGGG TGTTGTAGATGCTGCTCTG CTATCTCATG 269876 403 1.48e-09 AATGAACGCG TGTTGTAGCTATTTCTCGT TTACCTGATA 264384 246 1.48e-09 AATGAACGCG TGTTGTAGCTATTTCTCGT TTACCTGATA 270291 406 1.18e-08 TTTCACAGCG TGTTGTAGCTTAAGCTGTT GGTGCTTGGC 26991 315 1.18e-08 TTTCACAGCG TGTTGTAGCTTAAGCTGTT GGTGCTTGGC 269653 136 1.47e-08 CCGGTGGTGC TGTTGTAGACGTTGTTGTT GTAGCCAGAT 3898 366 7.99e-08 ACAGGTACGA TGTTGTACCTACCTCTCGT ATCTTCCGAC 34094 77 2.75e-07 GAATTCATGA TGTTGAAGGCGTTGTTGGT GCGATGTGCT 8959 72 3.56e-07 CAATTATATT TAACGAAGCTGCTGCTCTG GCAGCTCTTT 263287 389 4.55e-07 GCTTTGATTA TGTCGTACCTGCTGAACTG AATCAACTCA 1807 14 5.43e-07 CGTCGGCCTT GGATGTGGCTGCTTTTCGT TTGGGATTTT bd884 249 6.46e-07 CGACGGTTTA TGTGGTAGTTGATCTTGTG TTGAGATGAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 37934 1.4e-10 178_[+1]_303 270300 1.4e-10 177_[+1]_304 269876 1.5e-09 402_[+1]_79 264384 1.5e-09 245_[+1]_236 270291 1.2e-08 405_[+1]_76 26991 1.2e-08 314_[+1]_167 269653 1.5e-08 135_[+1]_346 3898 8e-08 365_[+1]_116 34094 2.8e-07 76_[+1]_405 8959 3.6e-07 71_[+1]_410 263287 4.6e-07 388_[+1]_93 1807 5.4e-07 13_[+1]_468 bd884 6.5e-07 248_[+1]_233 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 1 width=19 seqs=13 37934 ( 179) TGTTGTAGATGCTGCTCTG 1 270300 ( 178) TGTTGTAGATGCTGCTCTG 1 269876 ( 403) TGTTGTAGCTATTTCTCGT 1 264384 ( 246) TGTTGTAGCTATTTCTCGT 1 270291 ( 406) TGTTGTAGCTTAAGCTGTT 1 26991 ( 315) TGTTGTAGCTTAAGCTGTT 1 269653 ( 136) TGTTGTAGACGTTGTTGTT 1 3898 ( 366) TGTTGTACCTACCTCTCGT 1 34094 ( 77) TGTTGAAGGCGTTGTTGGT 1 8959 ( 72) TAACGAAGCTGCTGCTCTG 1 263287 ( 389) TGTCGTACCTGCTGAACTG 1 1807 ( 14) GGATGTGGCTGCTTTTCGT 1 bd884 ( 249) TGTGGTAGTTGATCTTGTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 19 n= 12050 bayes= 9.61004 E= 1.9e-011 -1035 -1035 -161 180 -175 -1035 197 -1035 -75 -1035 -1035 167 -1035 -64 -161 153 -1035 -1035 209 -1035 -75 -1035 -1035 167 183 -1035 -161 -1035 -1035 -64 185 -1035 -17 136 -161 -179 -1035 -64 -1035 167 -17 -1035 139 -79 -17 95 -1035 21 -75 -164 -1035 153 -1035 -164 139 21 -175 136 -1035 21 -175 -1035 -1035 180 -1035 136 71 -1035 -1035 -1035 71 121 -1035 -1035 71 121 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 19 nsites= 13 E= 1.9e-011 0.000000 0.000000 0.076923 0.923077 0.076923 0.000000 0.923077 0.000000 0.153846 0.000000 0.000000 0.846154 0.000000 0.153846 0.076923 0.769231 0.000000 0.000000 1.000000 0.000000 0.153846 0.000000 0.000000 0.846154 0.923077 0.000000 0.076923 0.000000 0.000000 0.153846 0.846154 0.000000 0.230769 0.615385 0.076923 0.076923 0.000000 0.153846 0.000000 0.846154 0.230769 0.000000 0.615385 0.153846 0.230769 0.461538 0.000000 0.307692 0.153846 0.076923 0.000000 0.769231 0.000000 0.076923 0.615385 0.307692 0.076923 0.615385 0.000000 0.307692 0.076923 0.000000 0.000000 0.923077 0.000000 0.615385 0.384615 0.000000 0.000000 0.000000 0.384615 0.615385 0.000000 0.000000 0.384615 0.615385 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 regular expression -------------------------------------------------------------------------------- TGTTGTAG[CA]T[GA][CTA]T[GT][CT]T[CG][TG][TG] -------------------------------------------------------------------------------- Time 6.66 secs. ******************************************************************************** ******************************************************************************** MOTIF 2 MEME width = 20 sites = 16 llr = 222 E-value = 1.6e-012 ******************************************************************************** -------------------------------------------------------------------------------- Motif 2 Description -------------------------------------------------------------------------------- Simplified A 37:171:4139::42191:8 pos.-specific C 1:a1:11:4117:24::33: probability G 73:9:18336:1a2391481 matrix T ::::36131::2:21::3:1 bits 2.1 * * 1.9 * * 1.7 * * * * 1.5 ** * * ** Relative 1.3 ** * * * ** * Entropy 1.0 **** * * * ** * (20.0 bits) 0.8 ***** * *** ** ** 0.6 ***** * **** ** ** 0.4 ******** **** ** ** 0.2 ******************** 0.0 -------------------- Multilevel GACGATGACGACGACGAGGA consensus AG T TGA G CC sequence G T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------------------- 1807 441 6.42e-13 CAGTTTGATA GACGATGACGACGACGAGGA AGGATTGCAA 37934 52 1.50e-08 TAGTCTTGCC GGCGTTGTCGAGGCCGAGGA TGAGTATGCG 270300 51 1.50e-08 TAGTCTTGCC GGCGTTGTCGAGGCCGAGGA TGAGTATGCG 5362 137 2.13e-08 TGTAGGCAAC GGCGATGAGAATGCGGATGA CATTATAAGA 270291 154 3.68e-08 TGAGGTGATT GGCGTGGTCGACGTAGAGGA TGGCACCTCG 26991 63 3.68e-08 TGAGGTGATT GGCGTGGTCGACGTAGAGGA TGGCACCTCG 8959 284 5.59e-08 CAAACGACAC GACGAACGGAACGACGACGA GACGAAGCAC 821 284 5.59e-08 CAAACGACAT GACGAACGGAACGACGACGA GACGAAGCAC 269876 318 2.08e-07 AGTTGTTCCA AACGATGAGAACGGGGATCT TGGATTGATC 264384 161 2.08e-07 AGTTGTTCCA AACGATGAGAACGGGGATCT TGGATTGATC 8903 8 2.46e-07 GTATGCG AACGACGACGACGACGGCGG CTTGGTGTTT 28025 50 4.35e-07 ACGGACGACG GACGACGGACACGGTGAGGA AATTTCTACC 261641 296 1.37e-06 TCCAGATCTT GACGATTATGATGAAGGTGA TCCGGTCGAC 269653 341 1.66e-06 ATTGCTCTTG GACCATGGTCACGACGAACA ACGGTCGGTA 34094 376 3.21e-06 GGCTCTGTCC AACATTGTAGCCGTGGAGGA GGATAACGTT bd884 351 4.00e-06 ACGAACTCAG CACGATGACGATGAGAACCG TAGCTTTGAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 1807 6.4e-13 440_[+2]_40 37934 1.5e-08 51_[+2]_429 270300 1.5e-08 50_[+2]_430 5362 2.1e-08 136_[+2]_344 270291 3.7e-08 153_[+2]_327 26991 3.7e-08 62_[+2]_418 8959 5.6e-08 283_[+2]_197 821 5.6e-08 283_[+2]_197 269876 2.1e-07 317_[+2]_163 264384 2.1e-07 160_[+2]_320 8903 2.5e-07 7_[+2]_473 28025 4.3e-07 49_[+2]_431 261641 1.4e-06 295_[+2]_185 269653 1.7e-06 340_[+2]_140 34094 3.2e-06 375_[+2]_105 bd884 4e-06 350_[+2]_130 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 2 width=20 seqs=16 1807 ( 441) GACGATGACGACGACGAGGA 1 37934 ( 52) GGCGTTGTCGAGGCCGAGGA 1 270300 ( 51) GGCGTTGTCGAGGCCGAGGA 1 5362 ( 137) GGCGATGAGAATGCGGATGA 1 270291 ( 154) GGCGTGGTCGACGTAGAGGA 1 26991 ( 63) GGCGTGGTCGACGTAGAGGA 1 8959 ( 284) GACGAACGGAACGACGACGA 1 821 ( 284) GACGAACGGAACGACGACGA 1 269876 ( 318) AACGATGAGAACGGGGATCT 1 264384 ( 161) AACGATGAGAACGGGGATCT 1 8903 ( 8) AACGACGACGACGACGGCGG 1 28025 ( 50) GACGACGGACACGGTGAGGA 1 261641 ( 296) GACGATTATGATGAAGGTGA 1 269653 ( 341) GACCATGGTCACGACGAACA 1 34094 ( 376) AACATTGTAGCCGTGGAGGA 1 bd884 ( 351) CACGATGACGATGAGAACCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 20 n= 12025 bayes= 9.55183 E= 1.6e-012 -5 -194 155 -1064 141 -1064 41 -1064 -1064 206 -1064 -1064 -205 -194 189 -1064 141 -1064 -1064 23 -105 -94 -91 123 -1064 -94 179 -208 75 -1064 9 23 -105 87 41 -109 27 -94 126 -1064 185 -194 -1064 -1064 -1064 152 -91 -50 -1064 -1064 209 -1064 75 -35 -33 -50 -47 87 41 -208 -205 -1064 199 -1064 175 -1064 -91 -1064 -205 6 89 -9 -1064 6 167 -1064 153 -1064 -91 -109 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 20 nsites= 16 E= 1.6e-012 0.250000 0.062500 0.687500 0.000000 0.687500 0.000000 0.312500 0.000000 0.000000 1.000000 0.000000 0.000000 0.062500 0.062500 0.875000 0.000000 0.687500 0.000000 0.000000 0.312500 0.125000 0.125000 0.125000 0.625000 0.000000 0.125000 0.812500 0.062500 0.437500 0.000000 0.250000 0.312500 0.125000 0.437500 0.312500 0.125000 0.312500 0.125000 0.562500 0.000000 0.937500 0.062500 0.000000 0.000000 0.000000 0.687500 0.125000 0.187500 0.000000 0.000000 1.000000 0.000000 0.437500 0.187500 0.187500 0.187500 0.187500 0.437500 0.312500 0.062500 0.062500 0.000000 0.937500 0.000000 0.875000 0.000000 0.125000 0.000000 0.062500 0.250000 0.437500 0.250000 0.000000 0.250000 0.750000 0.000000 0.750000 0.000000 0.125000 0.125000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 regular expression -------------------------------------------------------------------------------- [GA][AG]CG[AT]TG[ATG][CG][GA]ACGA[CG]GA[GCT][GC]A -------------------------------------------------------------------------------- Time 13.34 secs. ******************************************************************************** ******************************************************************************** MOTIF 3 MEME width = 20 sites = 9 llr = 160 E-value = 1.3e-006 ******************************************************************************** -------------------------------------------------------------------------------- Motif 3 Description -------------------------------------------------------------------------------- Simplified A ::12236:9a::2:28:8:: pos.-specific C 88:28::a::::6a1:3:4a probability G :2:4::::::4:2:::7::: matrix T 2:91:74:1:6a::72:26: bits 2.1 * * * 1.9 * * * * * 1.7 * * * * * 1.5 * *** * * * Relative 1.3 *** * *** * * *** * Entropy 1.0 *** ******** * ***** (25.7 bits) 0.8 *** ******** * ***** 0.6 *** **************** 0.4 *** **************** 0.2 ******************** 0.0 -------------------- Multilevel CCTGCTACAATTCCTAGATC consensus TG AAAT G A ATCTC sequence C G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------------------- 269876 425 6.20e-11 TTCTCGTTTA CCTGATACAATTCCTAGATC TGACAAGTGT 264384 268 6.20e-11 TTCTCGTTTA CCTGATACAATTCCTAGATC TGACAAGGTT 37934 326 7.58e-10 TGAAGTTTCC CCTACATCAAGTGCTAGATC GAAACAATAT 270300 325 7.58e-10 TGAAGTTTCC CCTACATCAAGTGCTAGATC GAAACAATAT 270291 360 6.16e-09 ACGTCACTGT CGTGCTTCAAGTCCTTGTCC ACTACATTCA 26991 269 6.16e-09 ACGTCACTGT CGTGCTTCAAGTCCTTGTCC ACTACATTCA 821 475 9.68e-09 GCTCCCTCGC TCTCCTACAATTACAACACC ACCACC 8959 475 1.65e-08 GCTCCCTCGC TCTCCAACAATTACAACACC ACCACC 28025 275 6.55e-08 TCATGTTGCA CCATCTACTATTCCCACATC ATCACTGTCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 269876 6.2e-11 424_[+3]_56 264384 6.2e-11 267_[+3]_213 37934 7.6e-10 325_[+3]_155 270300 7.6e-10 324_[+3]_156 270291 6.2e-09 359_[+3]_121 26991 6.2e-09 268_[+3]_212 821 9.7e-09 474_[+3]_6 8959 1.7e-08 474_[+3]_6 28025 6.5e-08 274_[+3]_206 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 3 width=20 seqs=9 269876 ( 425) CCTGATACAATTCCTAGATC 1 264384 ( 268) CCTGATACAATTCCTAGATC 1 37934 ( 326) CCTACATCAAGTGCTAGATC 1 270300 ( 325) CCTACATCAAGTGCTAGATC 1 270291 ( 360) CGTGCTTCAAGTCCTTGTCC 1 26991 ( 269) CGTGCTTCAAGTCCTTGTCC 1 821 ( 475) TCTCCTACAATTACAACACC 1 8959 ( 475) TCTCCAACAATTACAACACC 1 28025 ( 275) CCATCTACTATTCCCACATC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 20 n= 12025 bayes= 9.6841 E= 1.3e-006 -982 170 -982 -26 -982 170 -8 -982 -122 -982 -982 174 -22 -11 92 -126 -22 170 -982 -982 36 -982 -982 133 110 -982 -982 74 -982 206 -982 -982 178 -982 -982 -126 195 -982 -982 -982 -982 -982 92 106 -982 -982 -982 191 -22 121 -8 -982 -982 206 -982 -982 -22 -111 -982 133 158 -982 -982 -26 -982 48 150 -982 158 -982 -982 -26 -982 89 -982 106 -982 206 -982 -982 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 20 nsites= 9 E= 1.3e-006 0.000000 0.777778 0.000000 0.222222 0.000000 0.777778 0.222222 0.000000 0.111111 0.000000 0.000000 0.888889 0.222222 0.222222 0.444444 0.111111 0.222222 0.777778 0.000000 0.000000 0.333333 0.000000 0.000000 0.666667 0.555556 0.000000 0.000000 0.444444 0.000000 1.000000 0.000000 0.000000 0.888889 0.000000 0.000000 0.111111 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.444444 0.555556 0.000000 0.000000 0.000000 1.000000 0.222222 0.555556 0.222222 0.000000 0.000000 1.000000 0.000000 0.000000 0.222222 0.111111 0.000000 0.666667 0.777778 0.000000 0.000000 0.222222 0.000000 0.333333 0.666667 0.000000 0.777778 0.000000 0.000000 0.222222 0.000000 0.444444 0.000000 0.555556 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 regular expression -------------------------------------------------------------------------------- [CT][CG]T[GAC][CA][TA][AT]CAA[TG]T[CAG]C[TA][AT][GC][AT][TC]C -------------------------------------------------------------------------------- Time 19.65 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 12055 3.38e-01 500 1807 2.82e-11 13_[+1(5.43e-07)]_408_\ [+2(6.42e-13)]_40 21591 1.28e-01 500 23620 8.48e-01 500 25166 9.00e-03 79_[+1(8.30e-06)]_402 261641 2.11e-03 295_[+2(1.37e-06)]_185 263287 3.86e-04 388_[+1(4.55e-07)]_93 263883 3.79e-02 436_[+3(3.58e-05)]_44 264384 1.84e-15 160_[+2(2.08e-07)]_65_\ [+1(1.48e-09)]_3_[+3(6.20e-11)]_213 268242 9.60e-01 500 269653 7.25e-07 4_[+1(1.21e-05)]_112_[+1(1.47e-08)]_\ 186_[+2(1.66e-06)]_140 269876 1.84e-15 317_[+2(2.08e-07)]_65_\ [+1(1.48e-09)]_3_[+3(6.20e-11)]_56 26991 2.02e-13 62_[+2(3.68e-08)]_39_[+1(5.60e-05)]_\ 128_[+3(6.16e-09)]_26_[+1(1.18e-08)]_167 270291 2.02e-13 153_[+2(3.68e-08)]_39_\ [+1(5.60e-05)]_128_[+3(6.16e-09)]_26_[+1(1.18e-08)]_76 270300 1.77e-16 50_[+2(1.50e-08)]_107_\ [+1(1.43e-10)]_128_[+3(7.58e-10)]_108_[+3(7.50e-06)]_28 28025 1.17e-06 49_[+2(4.35e-07)]_205_\ [+3(6.55e-08)]_206 34094 2.35e-05 76_[+1(2.75e-07)]_280_\ [+2(3.21e-06)]_105 37934 1.77e-16 51_[+2(1.50e-08)]_107_\ [+1(1.43e-10)]_128_[+3(7.58e-10)]_108_[+3(7.50e-06)]_27 3898 7.17e-04 365_[+1(7.99e-08)]_116 5362 1.58e-04 136_[+2(2.13e-08)]_344 821 2.63e-08 283_[+2(5.59e-08)]_171_\ [+3(9.68e-09)]_6 8903 7.47e-04 7_[+2(2.46e-07)]_473 8959 1.87e-11 71_[+1(3.56e-07)]_193_\ [+2(5.59e-08)]_171_[+3(1.65e-08)]_6 9763 4.43e-01 500 bd884 6.76e-05 248_[+1(6.46e-07)]_83_\ [+2(4.00e-06)]_130 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because nmotifs = 3 reached. ******************************************************************************** CPU: seaotter.hsd1.wa.comcast.net ********************************************************************************