******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.10.0 (Release date: Wed May 21 10:35:36 2014 +1000) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net. This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme.nbcr.net. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= motifs/129/129.seqs.fa ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ 1101 1.0000 500 1725 1.0000 500 2022 1.0000 500 21324 1.0000 500 22142 1.0000 500 22566 1.0000 500 22897 1.0000 500 23784 1.0000 500 24340 1.0000 500 24475 1.0000 500 24546 1.0000 500 25228 1.0000 500 25583 1.0000 500 263866 1.0000 500 268671 1.0000 500 27557 1.0000 500 4315 1.0000 500 5298 1.0000 500 6165 1.0000 500 7140 1.0000 500 7471 1.0000 500 7917 1.0000 500 8544 1.0000 500 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme motifs/129/129.seqs.fa -oc motifs/129 -dna -minw 12 -maxw 21 -nmotifs 3 -maxsize 500000 model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 12 maxw= 21 minic= 0.00 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 23 wnsites= 0.8 theta: prob= 1 spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 11500 N= 23 strands: + sample: seed= 0 seqfrac= 1 Letter frequencies in dataset: A 0.252 C 0.231 G 0.252 T 0.265 Background letter frequencies (from dataset with add-one prior applied): A 0.252 C 0.231 G 0.252 T 0.265 ******************************************************************************** ******************************************************************************** MOTIF 1 MEME width = 16 sites = 13 llr = 161 E-value = 1.5e-002 ******************************************************************************** -------------------------------------------------------------------------------- Motif 1 Description -------------------------------------------------------------------------------- Simplified A a19:a:262532:782 pos.-specific C :112::51:22:31:1 probability G :8:8:92181287228 matrix T :::::112:23::::: bits 2.1 1.9 * * 1.7 * * ** 1.5 * **** Relative 1.3 ****** * * * Entropy 1.1 ****** * ** ** (17.9 bits) 0.8 ****** * ***** 0.6 ****** * ***** 0.4 ********* ***** 0.2 ********** ***** 0.0 ---------------- Multilevel AGAGAGCAGAAGGAAG consensus AT CT CGG sequence TC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ---------------- 5298 233 4.84e-09 ATTGACGAAC AGAGAGCAGATGGGAG ATTGTCGTGT 263866 82 7.87e-08 GGCGAGAACT AGACAGCAGATGGAGG CAGAACATGT 24546 296 1.37e-07 TTCGGGTGAG AGAGAGGAGTAGGGAG GTTGTTGGTG 22566 269 1.73e-07 TGTGGACGGC AGAGAGCAGGAGGAAA AAACAGTTGC 2022 428 1.73e-07 TACTGTTTTC AGAGAGAAGACGGGGG CAACGCAGAC 7140 484 2.15e-07 CCCAGCAAAG AGAGAGCAGCTGCAAC A 22142 95 1.45e-06 GTACAGCCAG ACAGAGTAGTCGGAAG GATGTCATGA 23784 337 1.70e-06 GGTGGGTTGC AGAGAGATGAGAGAGG AACGTGTGGT 4315 48 2.30e-06 GTGTAGCAAG AGAGAGAGGAAGCCAG CTACAGCGGC 27557 137 2.66e-06 GCAAAGTGAG AGAGATCTATTGGAAG ATATACAATA 24340 403 2.85e-06 TGCAAATAGG AGAGAGGTACGGCAAG TCGCCTGTTT 21324 3 3.28e-06 AA AAAGAGCAGCAAGAAA CGCAGCAAGA 7471 433 5.21e-06 TCCCATCCAC AGCCAGCCGACGCAAG TGACATAAGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 5298 4.8e-09 232_[+1]_252 263866 7.9e-08 81_[+1]_403 24546 1.4e-07 295_[+1]_189 22566 1.7e-07 268_[+1]_216 2022 1.7e-07 427_[+1]_57 7140 2.1e-07 483_[+1]_1 22142 1.4e-06 94_[+1]_390 23784 1.7e-06 336_[+1]_148 4315 2.3e-06 47_[+1]_437 27557 2.7e-06 136_[+1]_348 24340 2.8e-06 402_[+1]_82 21324 3.3e-06 2_[+1]_482 7471 5.2e-06 432_[+1]_52 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 1 width=16 seqs=13 5298 ( 233) AGAGAGCAGATGGGAG 1 263866 ( 82) AGACAGCAGATGGAGG 1 24546 ( 296) AGAGAGGAGTAGGGAG 1 22566 ( 269) AGAGAGCAGGAGGAAA 1 2022 ( 428) AGAGAGAAGACGGGGG 1 7140 ( 484) AGAGAGCAGCTGCAAC 1 22142 ( 95) ACAGAGTAGTCGGAAG 1 23784 ( 337) AGAGAGATGAGAGAGG 1 4315 ( 48) AGAGAGAGGAAGCCAG 1 27557 ( 137) AGAGATCTATTGGAAG 1 24340 ( 403) AGAGAGGTACGGCAAG 1 21324 ( 3) AAAGAGCAGCAAGAAA 1 7471 ( 433) AGCCAGCCGACGCAAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 11155 bayes= 10.2743 E= 1.5e-002 199 -1035 -1035 -1035 -171 -159 175 -1035 187 -159 -1035 -1035 -1035 -59 175 -1035 199 -1035 -1035 -1035 -1035 -1035 187 -178 -13 122 -71 -178 129 -159 -171 -20 -71 -1035 175 -1035 87 0 -171 -20 29 0 -71 22 -71 -1035 175 -1035 -1035 41 146 -1035 146 -159 -12 -1035 161 -1035 -12 -1035 -71 -159 161 -1035 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 13 E= 1.5e-002 1.000000 0.000000 0.000000 0.000000 0.076923 0.076923 0.846154 0.000000 0.923077 0.076923 0.000000 0.000000 0.000000 0.153846 0.846154 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.923077 0.076923 0.230769 0.538462 0.153846 0.076923 0.615385 0.076923 0.076923 0.230769 0.153846 0.000000 0.846154 0.000000 0.461538 0.230769 0.076923 0.230769 0.307692 0.230769 0.153846 0.307692 0.153846 0.000000 0.846154 0.000000 0.000000 0.307692 0.692308 0.000000 0.692308 0.076923 0.230769 0.000000 0.769231 0.000000 0.230769 0.000000 0.153846 0.076923 0.769231 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 regular expression -------------------------------------------------------------------------------- AGAGAG[CA][AT]G[ACT][ATC]G[GC][AG][AG]G -------------------------------------------------------------------------------- Time 6.27 secs. ******************************************************************************** ******************************************************************************** MOTIF 2 MEME width = 12 sites = 14 llr = 152 E-value = 2.9e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif 2 Description -------------------------------------------------------------------------------- Simplified A :17::a:28::6 pos.-specific C 4::7::611911 probability G 6913a:471194 matrix T 1:2::::::::: bits 2.1 1.9 ** 1.7 * ** ** 1.5 * ** ** Relative 1.3 * *** ** Entropy 1.1 * **** *** (15.6 bits) 0.8 *********** 0.6 ************ 0.4 ************ 0.2 ************ 0.0 ------------ Multilevel GGACGACGACGA consensus C TG GA G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------ 4315 426 5.05e-08 AGAATGGGAA GGACGACGACGA GCGAGGCCCA 24546 55 5.05e-08 TGCGGAGACG GGACGACGACGA TAAAATGGGA 23784 432 9.68e-08 TGCTGCCCGC CGACGACGACGA CGACGACGAT 27557 215 2.02e-07 CGATGATTGA GGACGAGGACGA CAATACCTAT 22142 439 2.92e-06 AAAGCAACCA CGGCGACGACGA CCCCACAGAA 268671 159 3.29e-06 TGGTGTCTTT GGAGGACGGCGA GACGTTGAGG 25228 4 6.00e-06 AAT CAACGACGACGG CTGTTTCTTC 7140 192 6.34e-06 TTTTTGTTAC GGTGGAGGACGG TGTGGACTGT 7917 179 6.84e-06 CGGCGCAGCC CGTCGAGAACGA TGGCACTCCA 5298 440 1.21e-05 ACAGCTCCTT TGACGACGGCGG TATTGTCAGT 7471 233 1.91e-05 TTGCGTGTCG GGAGGAGGAGGG TAGAGGGAAT 25583 153 1.91e-05 TGTGGAAAGC GGTCGACACCGA GCGTACGAGG 22897 340 2.40e-05 CGAACTCGAC GGACGACCACCG ACCACCTCGC 1101 265 2.58e-05 ATGCCATCAC CGAGGAGAACGC CCAGCTCGTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 4315 5.1e-08 425_[+2]_63 24546 5.1e-08 54_[+2]_434 23784 9.7e-08 431_[+2]_57 27557 2e-07 214_[+2]_274 22142 2.9e-06 438_[+2]_50 268671 3.3e-06 158_[+2]_330 25228 6e-06 3_[+2]_485 7140 6.3e-06 191_[+2]_297 7917 6.8e-06 178_[+2]_310 5298 1.2e-05 439_[+2]_49 7471 1.9e-05 232_[+2]_256 25583 1.9e-05 152_[+2]_336 22897 2.4e-05 339_[+2]_149 1101 2.6e-05 264_[+2]_224 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 2 width=12 seqs=14 4315 ( 426) GGACGACGACGA 1 24546 ( 55) GGACGACGACGA 1 23784 ( 432) CGACGACGACGA 1 27557 ( 215) GGACGAGGACGA 1 22142 ( 439) CGGCGACGACGA 1 268671 ( 159) GGAGGACGGCGA 1 25228 ( 4) CAACGACGACGG 1 7140 ( 192) GGTGGAGGACGG 1 7917 ( 179) CGTCGAGAACGA 1 5298 ( 440) TGACGACGGCGG 1 7471 ( 233) GGAGGAGGAGGG 1 25583 ( 153) GGTCGACACCGA 1 22897 ( 340) GGACGACCACCG 1 1101 ( 265) CGAGGAGAACGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 11247 bayes= 10.8715 E= 2.9e-001 -1045 63 118 -189 -182 -1045 188 -1045 150 -1045 -181 -31 -1045 162 18 -1045 -1045 -1045 199 -1045 199 -1045 -1045 -1045 -1045 147 51 -1045 -23 -169 150 -1045 164 -169 -82 -1045 -1045 200 -181 -1045 -1045 -169 188 -1045 118 -169 51 -1045 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 14 E= 2.9e-001 0.000000 0.357143 0.571429 0.071429 0.071429 0.000000 0.928571 0.000000 0.714286 0.000000 0.071429 0.214286 0.000000 0.714286 0.285714 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.642857 0.357143 0.000000 0.214286 0.071429 0.714286 0.000000 0.785714 0.071429 0.142857 0.000000 0.000000 0.928571 0.071429 0.000000 0.000000 0.071429 0.928571 0.000000 0.571429 0.071429 0.357143 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 regular expression -------------------------------------------------------------------------------- [GC]G[AT][CG]GA[CG][GA]ACG[AG] -------------------------------------------------------------------------------- Time 12.18 secs. ******************************************************************************** ******************************************************************************** MOTIF 3 MEME width = 12 sites = 21 llr = 190 E-value = 1.0e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif 3 Description -------------------------------------------------------------------------------- Simplified A 21:2:::4::33 pos.-specific C 4::::::5:174 probability G :2a:::a1:6:: matrix T 37:79a::a3:2 bits 2.1 1.9 * 1.7 * ** * 1.5 * *** * Relative 1.3 * *** * * Entropy 1.1 * *** * * (13.1 bits) 0.8 * *** * * 0.6 ******** * 0.4 ************ 0.2 ************ 0.0 ------------ Multilevel CTGTTTGCTGCC consensus T A A TAA sequence A T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------ 27557 171 3.23e-07 TATGCTCTAT ATGTTTGCTGCC GATTCAATGG 25228 327 3.23e-07 TTGGTATTGG ATGTTTGCTGCC TTGTGGTTGT 268671 318 1.38e-06 TGATCTGCTC TTGTTTGATGCA TCGTCTAGCT 22897 260 1.62e-06 TGTGTGAGCG TTGATTGCTGCC TACGTTATAA 22142 55 7.20e-06 GACGAAGCTG CAGTTTGATGCA GTGAACACGA 263866 236 1.13e-05 ATTTGTGCCA TAGTTTGCTTCC ATTACACAGA 25583 359 1.33e-05 CCCACTCTTC ATGTTTGATCCC TTTACCAAAC 21324 306 1.51e-05 CCCAGCACGT CTGCTTGCTGCA CAAAAGGATG 24340 423 1.69e-05 GGCAAGTCGC CTGTTTGGTTCA CTTGACGGTA 6165 406 2.59e-05 TGTGAGTCAG TTGATTGATGAT GCCGTCCACA 4315 160 2.59e-05 CACTCACCCC CTGATTGATTAA TATAATAAAA 5298 98 3.12e-05 GTGAATAAGG CAGTTTGATGAT GAAATGAACA 2022 468 3.46e-05 GTTGATTGAT CTGTATGCTTCC ACTTCGTATT 1725 267 3.46e-05 GTATCATTTC CTGTTTGCAGCT CTCGCAATGT 1101 53 4.72e-05 ATACACTATA CGGTTTGATACC AAGCTGTTGA 8544 31 5.38e-05 GTGTGACTAA TGGATTGCTGAT ATGTTTGCGG 7917 319 5.38e-05 ATTCGTCTCA ATGTCTGCTTCC AGCCGTCAAG 7140 50 5.38e-05 GTCGTTGCCG ATGTTTGGTGAT GATTGGGCGT 7471 486 8.96e-05 CTAACTGCTT CGGGTTGCTTCA AAC 22566 6 1.90e-04 GGATG TTCATTGATGAA CTAATTCACC 24546 387 2.27e-04 TCGGGGAAAA TGGTTTCCTCCC CCCCGTGGTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 27557 3.2e-07 170_[+3]_318 25228 3.2e-07 326_[+3]_162 268671 1.4e-06 317_[+3]_171 22897 1.6e-06 259_[+3]_229 22142 7.2e-06 54_[+3]_434 263866 1.1e-05 235_[+3]_253 25583 1.3e-05 358_[+3]_130 21324 1.5e-05 305_[+3]_183 24340 1.7e-05 422_[+3]_66 6165 2.6e-05 405_[+3]_83 4315 2.6e-05 159_[+3]_329 5298 3.1e-05 97_[+3]_391 2022 3.5e-05 467_[+3]_21 1725 3.5e-05 266_[+3]_222 1101 4.7e-05 52_[+3]_436 8544 5.4e-05 30_[+3]_458 7917 5.4e-05 318_[+3]_170 7140 5.4e-05 49_[+3]_439 7471 9e-05 485_[+3]_3 22566 0.00019 5_[+3]_483 24546 0.00023 386_[+3]_102 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 3 width=12 seqs=21 27557 ( 171) ATGTTTGCTGCC 1 25228 ( 327) ATGTTTGCTGCC 1 268671 ( 318) TTGTTTGATGCA 1 22897 ( 260) TTGATTGCTGCC 1 22142 ( 55) CAGTTTGATGCA 1 263866 ( 236) TAGTTTGCTTCC 1 25583 ( 359) ATGTTTGATCCC 1 21324 ( 306) CTGCTTGCTGCA 1 24340 ( 423) CTGTTTGGTTCA 1 6165 ( 406) TTGATTGATGAT 1 4315 ( 160) CTGATTGATTAA 1 5298 ( 98) CAGTTTGATGAT 1 2022 ( 468) CTGTATGCTTCC 1 1725 ( 267) CTGTTTGCAGCT 1 1101 ( 53) CGGTTTGATACC 1 8544 ( 31) TGGATTGCTGAT 1 7917 ( 319) ATGTCTGCTTCC 1 7140 ( 50) ATGTTTGGTGAT 1 7471 ( 486) CGGGTTGCTTCA 1 22566 ( 6) TTCATTGATGAA 1 24546 ( 387) TGGTTTCCTCCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 11247 bayes= 9.36761 E= 1.0e+000 -8 89 -1104 33 -82 -1104 -40 133 -1104 -228 192 -1104 -8 -228 -240 133 -240 -228 -1104 177 -1104 -1104 -1104 192 -1104 -228 192 -1104 60 118 -140 -1104 -240 -1104 -1104 185 -240 -128 118 11 18 163 -1104 -1104 40 89 -1104 -15 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 21 E= 1.0e+000 0.238095 0.428571 0.000000 0.333333 0.142857 0.000000 0.190476 0.666667 0.000000 0.047619 0.952381 0.000000 0.238095 0.047619 0.047619 0.666667 0.047619 0.047619 0.000000 0.904762 0.000000 0.000000 0.000000 1.000000 0.000000 0.047619 0.952381 0.000000 0.380952 0.523810 0.095238 0.000000 0.047619 0.000000 0.000000 0.952381 0.047619 0.095238 0.571429 0.285714 0.285714 0.714286 0.000000 0.000000 0.333333 0.428571 0.000000 0.238095 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 regular expression -------------------------------------------------------------------------------- [CTA]TG[TA]TTG[CA]T[GT][CA][CAT] -------------------------------------------------------------------------------- Time 17.91 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 1101 1.05e-02 52_[+3(4.72e-05)]_200_\ [+2(2.58e-05)]_224 1725 2.89e-02 266_[+3(3.46e-05)]_222 2022 8.44e-05 427_[+1(1.73e-07)]_24_\ [+3(3.46e-05)]_21 21324 5.78e-04 2_[+1(3.28e-06)]_287_[+3(1.51e-05)]_\ 183 22142 7.39e-07 5_[+2(4.36e-05)]_37_[+3(7.20e-06)]_\ 28_[+1(1.45e-06)]_328_[+2(2.92e-06)]_50 22566 2.16e-04 268_[+1(1.73e-07)]_216 22897 7.08e-04 259_[+3(1.62e-06)]_68_\ [+2(2.40e-05)]_149 23784 6.29e-06 336_[+1(1.70e-06)]_79_\ [+2(9.68e-08)]_57 24340 4.91e-04 402_[+1(2.85e-06)]_4_[+3(1.69e-05)]_\ 66 24475 7.97e-01 500 24546 4.76e-08 54_[+2(5.05e-08)]_229_\ [+1(1.37e-07)]_189 25228 3.62e-05 3_[+2(6.00e-06)]_311_[+3(3.23e-07)]_\ 162 25583 3.11e-03 152_[+2(1.91e-05)]_194_\ [+3(1.33e-05)]_130 263866 1.37e-05 81_[+1(7.87e-08)]_138_\ [+3(1.13e-05)]_253 268671 1.07e-04 158_[+2(3.29e-06)]_147_\ [+3(1.38e-06)]_171 27557 6.61e-09 136_[+1(2.66e-06)]_18_\ [+3(3.23e-07)]_32_[+2(2.02e-07)]_274 4315 9.00e-08 47_[+1(2.30e-06)]_96_[+3(2.59e-05)]_\ 254_[+2(5.05e-08)]_63 5298 5.69e-08 97_[+3(3.12e-05)]_123_\ [+1(4.84e-09)]_191_[+2(1.21e-05)]_49 6165 9.05e-03 405_[+3(2.59e-05)]_83 7140 1.61e-06 49_[+3(5.38e-05)]_130_\ [+2(6.34e-06)]_280_[+1(2.15e-07)]_1 7471 1.11e-04 232_[+2(1.91e-05)]_188_\ [+1(5.21e-06)]_37_[+3(8.96e-05)]_3 7917 3.80e-03 178_[+2(6.84e-06)]_128_\ [+3(5.38e-05)]_170 8544 5.68e-02 30_[+3(5.38e-05)]_458 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because nmotifs = 3 reached. ******************************************************************************** CPU: seaotter.hsd1.wa.comcast.net ********************************************************************************