******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.10.0 (Release date: Wed May 21 10:35:36 2014 +1000) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net. This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme.nbcr.net. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= motifs/134/134.seqs.fa ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ 1467 1.0000 500 1569 1.0000 500 21259 1.0000 500 21947 1.0000 500 24616 1.0000 500 25734 1.0000 500 261387 1.0000 500 2637 1.0000 500 264274 1.0000 500 42265 1.0000 500 5319 1.0000 500 5898 1.0000 500 6404 1.0000 500 8051 1.0000 500 8480 1.0000 500 8482 1.0000 500 8811 1.0000 500 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme motifs/134/134.seqs.fa -oc motifs/134 -dna -minw 12 -maxw 21 -nmotifs 3 -maxsize 500000 model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 12 maxw= 21 minic= 0.00 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 17 wnsites= 0.8 theta: prob= 1 spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 8500 N= 17 strands: + sample: seed= 0 seqfrac= 1 Letter frequencies in dataset: A 0.271 C 0.228 G 0.235 T 0.267 Background letter frequencies (from dataset with add-one prior applied): A 0.271 C 0.228 G 0.235 T 0.267 ******************************************************************************** ******************************************************************************** MOTIF 1 MEME width = 19 sites = 17 llr = 193 E-value = 1.3e-004 ******************************************************************************** -------------------------------------------------------------------------------- Motif 1 Description -------------------------------------------------------------------------------- Simplified A 24:435752311651:724 pos.-specific C 639655147369119a:45 probability G ::1:::1212::22::14: matrix T 24::2:1::24:12::2:1 bits 2.1 * 1.9 * 1.7 * ** 1.5 * * ** Relative 1.3 * * ** Entropy 1.1 ** * * * ** (16.4 bits) 0.9 ** * * ** *** 0.6 * ** ** * ** ***** 0.4 ********* *** ***** 0.2 ********* ********* 0.0 ------------------- Multilevel CACCCAAACACCAACCACC consensus AT AAC CACT G TGA sequence C T G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------------- 5319 55 4.39e-08 GTGCACCGAA CACCCAAACGTCGACCTCC AATCCACCCG 2637 277 4.39e-08 TCCCCCCTTC CTCACAACCGCCAGCCAGA TAGAGACACC 42265 329 1.38e-07 TTCCATGCAC CACCACCACACCAACCTCC ATGGAAACAA 1467 474 1.80e-07 ACGCAAAACA CCCCCCACCCCAACCCACC CACCCAAC 1569 434 4.24e-07 TCTTCCTGCA CCCCTCCGCACCGACCACC ACCGGCGTCG 8482 212 5.32e-07 TAGACAGTCT TTCCCCAACCTCAGCCAGT CCATATCCCC 6404 470 9.16e-07 GCGACCACAA ATCATCAACTCCAACCACT GGTGATACAA 21259 474 1.52e-06 AGTAGTGTGC AACATAACAACCAACCAAC CAACCGTC 8811 468 2.65e-06 ATTTCATCTT CTCCTCTCCTTCACCCAGA ATAAATCCAC 5898 128 2.90e-06 TCCAATGCAG TAGCCAAACATCGACCAAC ACCACTCATT 8480 334 3.45e-06 ATTAGATTAG TTCCCAAGAGACAACCAGC ATATACTGCA 21947 477 4.44e-06 GCCTCCTGCT CCCACAAACGCACACCTCA AAGCA 24616 475 4.82e-06 ACTTCACTTC ACCCAAACGCCCATCCAAC AACAGTC 8051 387 6.12e-06 ACGTACGGTA CACCAAAGCACCCAACAGA GAAACTGACT 25734 460 8.91e-06 TCACTATCAT CAGCCCTCCTCCAGCCTGA GCCACAGCCT 264274 27 3.37e-05 TGTATAATCT CCCAAAGAACTCTTCCAGC TCCTTTGGAT 261387 465 3.37e-05 AAATATCGAC ATCAACAAACTCGTCCGCA AACGAACTCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 5319 4.4e-08 54_[+1]_427 2637 4.4e-08 276_[+1]_205 42265 1.4e-07 328_[+1]_153 1467 1.8e-07 473_[+1]_8 1569 4.2e-07 433_[+1]_48 8482 5.3e-07 211_[+1]_270 6404 9.2e-07 469_[+1]_12 21259 1.5e-06 473_[+1]_8 8811 2.7e-06 467_[+1]_14 5898 2.9e-06 127_[+1]_354 8480 3.5e-06 333_[+1]_148 21947 4.4e-06 476_[+1]_5 24616 4.8e-06 474_[+1]_7 8051 6.1e-06 386_[+1]_95 25734 8.9e-06 459_[+1]_22 264274 3.4e-05 26_[+1]_455 261387 3.4e-05 464_[+1]_17 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 1 width=19 seqs=17 5319 ( 55) CACCCAAACGTCGACCTCC 1 2637 ( 277) CTCACAACCGCCAGCCAGA 1 42265 ( 329) CACCACCACACCAACCTCC 1 1467 ( 474) CCCCCCACCCCAACCCACC 1 1569 ( 434) CCCCTCCGCACCGACCACC 1 8482 ( 212) TTCCCCAACCTCAGCCAGT 1 6404 ( 470) ATCATCAACTCCAACCACT 1 21259 ( 474) AACATAACAACCAACCAAC 1 8811 ( 468) CTCCTCTCCTTCACCCAGA 1 5898 ( 128) TAGCCAAACATCGACCAAC 1 8480 ( 334) TTCCCAAGAGACAACCAGC 1 21947 ( 477) CCCACAAACGCACACCTCA 1 24616 ( 475) ACCCAAACGCCCATCCAAC 1 8051 ( 387) CACCAAAGCACCCAACAGA 1 25734 ( 460) CAGCCCTCCTCCAGCCTGA 1 264274 ( 27) CCCAAAGAACTCTTCCAGC 1 261387 ( 465) ATCAACAAACTCGTCCGCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 19 n= 8194 bayes= 8.90989 E= 1.3e-004 -20 137 -1073 -59 38 37 -1073 40 -1073 195 -100 -1073 38 150 -1073 -1073 12 105 -1073 -18 97 105 -1073 -1073 138 -95 -200 -118 80 63 -41 -1073 -20 163 -200 -1073 12 37 0 -59 -220 137 -1073 40 -120 195 -1073 -1073 112 -95 0 -218 97 -95 -41 -59 -220 205 -1073 -1073 -1073 213 -1073 -1073 138 -1073 -200 -18 -62 85 81 -1073 38 122 -1073 -118 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 19 nsites= 17 E= 1.3e-004 0.235294 0.588235 0.000000 0.176471 0.352941 0.294118 0.000000 0.352941 0.000000 0.882353 0.117647 0.000000 0.352941 0.647059 0.000000 0.000000 0.294118 0.470588 0.000000 0.235294 0.529412 0.470588 0.000000 0.000000 0.705882 0.117647 0.058824 0.117647 0.470588 0.352941 0.176471 0.000000 0.235294 0.705882 0.058824 0.000000 0.294118 0.294118 0.235294 0.176471 0.058824 0.588235 0.000000 0.352941 0.117647 0.882353 0.000000 0.000000 0.588235 0.117647 0.235294 0.058824 0.529412 0.117647 0.176471 0.176471 0.058824 0.941176 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.705882 0.000000 0.058824 0.235294 0.176471 0.411765 0.411765 0.000000 0.352941 0.529412 0.000000 0.117647 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 regular expression -------------------------------------------------------------------------------- [CA][ATC]C[CA][CAT][AC]A[AC][CA][ACG][CT]C[AG]ACC[AT][CG][CA] -------------------------------------------------------------------------------- Time 3.39 secs. ******************************************************************************** ******************************************************************************** MOTIF 2 MEME width = 12 sites = 12 llr = 128 E-value = 5.5e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif 2 Description -------------------------------------------------------------------------------- Simplified A 1:231::::::: pos.-specific C 7a161:418:a7 probability G ::3:::5:3::2 matrix T 3:528a19:a:2 bits 2.1 * * 1.9 * * ** 1.7 * * ** 1.5 * * * ** Relative 1.3 * * **** Entropy 1.1 * ** **** (15.4 bits) 0.9 ** ******** 0.6 ** ********* 0.4 ** ********* 0.2 ************ 0.0 ------------ Multilevel CCTCTTGTCTCC consensus T GA C G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------ 5898 480 1.66e-07 CCTGCCTCCT CCGCTTCTCTCC CTCAAAACC 1467 377 2.19e-07 CAAAGAGCCA CCTATTGTCTCC TAAAGACTAG 261387 405 3.17e-07 CGGACTTTGC CCACTTGTCTCC AACTTCTATT 1569 366 1.57e-06 CTTTAAGGGC TCTATTGTCTCC ATGTATGAGA 8811 129 2.65e-06 TACTGCCAAC TCTCTTGTCTCG TCGTCGTCGT 2637 481 3.69e-06 GAAGAATCAG CCTCTTGTGTCT GTATCCGC 24616 390 1.03e-05 TCGTCCCATT CCTCTTCCCTCG GGCGATGACC 5319 284 1.22e-05 AAAAGACAGG TCGATTGTGTCC ACTATCTGTC 8051 461 1.38e-05 AGATATCCTT CCCCATCTCTCC ACTCCACAGA 8482 473 1.79e-05 AAAGACCAAT ACGTTTCTCTCC TTATTGTATA 264274 363 2.05e-05 ACTTGTGTGT CCACTTTTCTCT GTTTTATACA 42265 388 2.66e-05 CCGTCACCAA CCTTCTCTGTCC TCGAAGGATG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 5898 1.7e-07 479_[+2]_9 1467 2.2e-07 376_[+2]_112 261387 3.2e-07 404_[+2]_84 1569 1.6e-06 365_[+2]_123 8811 2.6e-06 128_[+2]_360 2637 3.7e-06 480_[+2]_8 24616 1e-05 389_[+2]_99 5319 1.2e-05 283_[+2]_205 8051 1.4e-05 460_[+2]_28 8482 1.8e-05 472_[+2]_16 264274 2.1e-05 362_[+2]_126 42265 2.7e-05 387_[+2]_101 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 2 width=12 seqs=12 5898 ( 480) CCGCTTCTCTCC 1 1467 ( 377) CCTATTGTCTCC 1 261387 ( 405) CCACTTGTCTCC 1 1569 ( 366) TCTATTGTCTCC 1 8811 ( 129) TCTCTTGTCTCG 1 2637 ( 481) CCTCTTGTGTCT 1 24616 ( 390) CCTCTTCCCTCG 1 5319 ( 284) TCGATTGTGTCC 1 8051 ( 461) CCCCATCTCTCC 1 8482 ( 473) ACGTTTCTCTCC 1 264274 ( 363) CCACTTTTCTCT 1 42265 ( 388) CCTTCTCTGTCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 8313 bayes= 9.88212 E= 5.5e-001 -170 155 -1023 -9 -1023 213 -1023 -1023 -70 -145 9 91 -11 136 -1023 -68 -170 -145 -1023 164 -1023 -1023 -1023 191 -1023 87 109 -167 -1023 -145 -1023 178 -1023 172 9 -1023 -1023 -1023 -1023 191 -1023 213 -1023 -1023 -1023 155 -49 -68 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 12 E= 5.5e-001 0.083333 0.666667 0.000000 0.250000 0.000000 1.000000 0.000000 0.000000 0.166667 0.083333 0.250000 0.500000 0.250000 0.583333 0.000000 0.166667 0.083333 0.083333 0.000000 0.833333 0.000000 0.000000 0.000000 1.000000 0.000000 0.416667 0.500000 0.083333 0.000000 0.083333 0.000000 0.916667 0.000000 0.750000 0.250000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.666667 0.166667 0.166667 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 regular expression -------------------------------------------------------------------------------- [CT]C[TG][CA]TT[GC]T[CG]TCC -------------------------------------------------------------------------------- Time 6.93 secs. ******************************************************************************** ******************************************************************************** MOTIF 3 MEME width = 12 sites = 17 llr = 161 E-value = 3.9e-003 ******************************************************************************** -------------------------------------------------------------------------------- Motif 3 Description -------------------------------------------------------------------------------- Simplified A 1:511a:2:::1 pos.-specific C :::21:1::1:1 probability G 4a:39:482:75 matrix T 6:55::6:8934 bits 2.1 * 1.9 * * 1.7 * * 1.5 * ** * Relative 1.3 * ** * * Entropy 1.1 * ** **** (13.7 bits) 0.9 *** ******* 0.6 *** ******* 0.4 *** ******** 0.2 ************ 0.0 ------------ Multilevel TGTTGATGTTGG consensus G AG GAG TT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------ 6404 77 2.84e-07 CTGCCATGGT TGTTGATGTTGT TTTTGAAAGA 42265 212 5.52e-07 CCATGGTTAC TGATGATGTTGT ACATGAAGAT 21947 175 5.52e-07 TCCGGTTGTC GGTTGATGTTGG CAAGATGATG 1569 275 2.44e-06 CCTACCACAT TGTCGAGGTTGG AGCTTGTAGC 8811 51 6.80e-06 GAGCTGTTCT GGAGGATGTTTG ACGTTTGTTA 21259 13 7.51e-06 GTGGGCTCTG TGTTGATGGTTG TTGGTTGGCT 261387 357 8.61e-06 ACCATTGGCT TGATGATGGTTG CGGGTCCCTC 24616 22 1.11e-05 CATTAGTCGG TGACGATGGTGT TGCTAATTGG 1467 284 1.42e-05 AGATTTCTGC GGTGGAGGTTGC CTTCCGAATA 8480 147 1.89e-05 CTGACTCTGA TGTAGAGGTTGT GGCTCCGGTT 8051 97 2.02e-05 AATGGATTTG GGATGATAGTGG AGGGGTGCGA 264274 94 2.39e-05 TGAGGCATCT TGTGGAGGTTTC GCGTGCATCA 8482 110 4.66e-05 CCTCCAGGAT TGTTGAGATTGA GTGTAGGATT 25734 69 5.43e-05 GCACGTCTTG TGACAATGTTGT GACGCATTTA 5898 208 7.41e-05 TGCATGGGTG GGATGATATCGG TACTGAGACA 2637 95 1.36e-04 TCACGTGACG AGAGGAGATTTG GTGAAGTCTC 5319 193 1.86e-04 TTGGTATCCA GGTGCACGTTGT TGGATGGCAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 6404 2.8e-07 76_[+3]_412 42265 5.5e-07 211_[+3]_277 21947 5.5e-07 174_[+3]_314 1569 2.4e-06 274_[+3]_214 8811 6.8e-06 50_[+3]_438 21259 7.5e-06 12_[+3]_476 261387 8.6e-06 356_[+3]_132 24616 1.1e-05 21_[+3]_467 1467 1.4e-05 283_[+3]_205 8480 1.9e-05 146_[+3]_342 8051 2e-05 96_[+3]_392 264274 2.4e-05 93_[+3]_395 8482 4.7e-05 109_[+3]_379 25734 5.4e-05 68_[+3]_420 5898 7.4e-05 207_[+3]_281 2637 0.00014 94_[+3]_394 5319 0.00019 192_[+3]_296 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 3 width=12 seqs=17 6404 ( 77) TGTTGATGTTGT 1 42265 ( 212) TGATGATGTTGT 1 21947 ( 175) GGTTGATGTTGG 1 1569 ( 275) TGTCGAGGTTGG 1 8811 ( 51) GGAGGATGTTTG 1 21259 ( 13) TGTTGATGGTTG 1 261387 ( 357) TGATGATGGTTG 1 24616 ( 22) TGACGATGGTGT 1 1467 ( 284) GGTGGAGGTTGC 1 8480 ( 147) TGTAGAGGTTGT 1 8051 ( 97) GGATGATAGTGG 1 264274 ( 94) TGTGGAGGTTTC 1 8482 ( 110) TGTTGAGATTGA 1 25734 ( 69) TGACAATGTTGT 1 5898 ( 208) GGATGATATCGG 1 2637 ( 95) AGAGGAGATTTG 1 5319 ( 193) GGTGCACGTTGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 8313 bayes= 8.93074 E= 3.9e-003 -220 -1073 59 114 -1073 -1073 209 -1073 80 -1073 -1073 99 -220 -37 32 82 -220 -195 191 -1073 189 -1073 -1073 -1073 -1073 -195 59 114 -20 -1073 170 -1073 -1073 -1073 0 152 -1073 -195 -1073 182 -1073 -1073 159 14 -220 -95 100 40 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 17 E= 3.9e-003 0.058824 0.000000 0.352941 0.588235 0.000000 0.000000 1.000000 0.000000 0.470588 0.000000 0.000000 0.529412 0.058824 0.176471 0.294118 0.470588 0.058824 0.058824 0.882353 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.058824 0.352941 0.588235 0.235294 0.000000 0.764706 0.000000 0.000000 0.000000 0.235294 0.764706 0.000000 0.058824 0.000000 0.941176 0.000000 0.000000 0.705882 0.294118 0.058824 0.117647 0.470588 0.352941 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 regular expression -------------------------------------------------------------------------------- [TG]G[TA][TG]GA[TG][GA][TG]T[GT][GT] -------------------------------------------------------------------------------- Time 9.95 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 1467 1.92e-08 283_[+3(1.42e-05)]_81_\ [+2(2.19e-07)]_85_[+1(1.80e-07)]_8 1569 5.13e-08 274_[+3(2.44e-06)]_79_\ [+2(1.57e-06)]_56_[+1(4.24e-07)]_48 21259 1.68e-04 12_[+3(7.51e-06)]_449_\ [+1(1.52e-06)]_8 21947 1.45e-05 62_[+3(2.66e-05)]_100_\ [+3(5.52e-07)]_290_[+1(4.44e-06)]_5 24616 9.78e-06 21_[+3(1.11e-05)]_356_\ [+2(1.03e-05)]_73_[+1(4.82e-06)]_7 25734 4.15e-03 68_[+3(5.43e-05)]_379_\ [+1(8.91e-06)]_22 261387 1.97e-06 301_[+3(5.04e-05)]_43_\ [+3(8.61e-06)]_36_[+2(3.17e-07)]_48_[+1(3.37e-05)]_17 2637 5.34e-07 276_[+1(4.39e-08)]_91_\ [+2(9.08e-05)]_82_[+2(3.69e-06)]_8 264274 1.89e-04 26_[+1(3.37e-05)]_48_[+3(2.39e-05)]_\ 257_[+2(2.05e-05)]_126 42265 6.25e-08 150_[+3(8.61e-06)]_49_\ [+3(5.52e-07)]_105_[+1(1.38e-07)]_5_[+1(2.69e-05)]_16_[+2(2.66e-05)]_101 5319 2.06e-06 54_[+1(4.39e-08)]_23_[+1(4.84e-05)]_\ 168_[+2(1.22e-05)]_205 5898 8.35e-07 127_[+1(2.90e-06)]_61_\ [+3(7.41e-05)]_260_[+2(1.66e-07)]_9 6404 3.72e-06 76_[+3(2.84e-07)]_381_\ [+1(9.16e-07)]_12 8051 2.65e-05 96_[+3(2.02e-05)]_278_\ [+1(6.12e-06)]_55_[+2(1.38e-05)]_28 8480 7.02e-04 146_[+3(1.89e-05)]_175_\ [+1(3.45e-06)]_148 8482 8.00e-06 109_[+3(4.66e-05)]_90_\ [+1(5.32e-07)]_242_[+2(1.79e-05)]_16 8811 1.10e-06 50_[+3(6.80e-06)]_66_[+2(2.65e-06)]_\ 327_[+1(2.65e-06)]_14 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because nmotifs = 3 reached. ******************************************************************************** CPU: seaotter.hsd1.wa.comcast.net ********************************************************************************