******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.10.0 (Release date: Wed May 21 10:35:36 2014 +1000) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net. This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme.nbcr.net. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= motifs/151/151.seqs.fa ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ 11613 1.0000 500 11700 1.0000 500 12500 1.0000 500 17593 1.0000 500 20702 1.0000 500 24063 1.0000 500 261516 1.0000 500 261716 1.0000 500 263092 1.0000 500 263540 1.0000 500 264851 1.0000 500 29139 1.0000 500 4336 1.0000 500 4423 1.0000 500 4590 1.0000 500 6715 1.0000 500 6768 1.0000 500 bd879 1.0000 500 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme motifs/151/151.seqs.fa -oc motifs/151 -dna -minw 12 -maxw 21 -nmotifs 3 -maxsize 500000 model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 12 maxw= 21 minic= 0.00 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 18 wnsites= 0.8 theta: prob= 1 spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 9000 N= 18 strands: + sample: seed= 0 seqfrac= 1 Letter frequencies in dataset: A 0.287 C 0.220 G 0.241 T 0.252 Background letter frequencies (from dataset with add-one prior applied): A 0.287 C 0.220 G 0.241 T 0.252 ******************************************************************************** ******************************************************************************** MOTIF 1 MEME width = 12 sites = 17 llr = 164 E-value = 1.5e-002 ******************************************************************************** -------------------------------------------------------------------------------- Motif 1 Description -------------------------------------------------------------------------------- Simplified A 28::5:21:55: pos.-specific C 8:5a:85:95:a probability G :11:11:21::: matrix T :24:4147:15: bits 2.2 * * 2.0 * * 1.7 * * * 1.5 * * * Relative 1.3 * * * * * Entropy 1.1 * * * * * (14.0 bits) 0.9 ** * * ** ** 0.7 ************ 0.4 ************ 0.2 ************ 0.0 ------------ Multilevel CACCACCTCAAC consensus A T T TG CT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------ 20702 477 6.14e-08 CACGACGGTA CACCACCTCCAC CTCTCCATAA 6715 99 4.68e-07 AAGCATGGAC CATCACCTCCAC TTGATATTCG 4336 97 9.55e-07 TTGCCTCTCC CATCACTTCCTC TTTTCAAAGC 24063 419 5.14e-06 CACGAATTCC AACCACTTCATC TACACAGGAC 4590 387 1.01e-05 CATCAACCAC AACCACCGCAAC CACCGCAACG 4423 475 1.24e-05 GTCGTGTAGT CTGCACCTCCAC TGTTACTCTC 29139 150 1.24e-05 CCAAAGCAAG CTCCTCTGCCTC TCTCACTTCT 263092 445 1.24e-05 TTTGGATTTT CACCACCACAAC ACCACACTGA 6768 30 1.35e-05 GCCACCACCA CTGCTCCTCCAC AACCAACACA bd879 486 2.28e-05 GCCAGGGAGG CACCGCATCATC ATC 264851 396 2.28e-05 ACAAATCACT CACCTGTTCATC CAAACCTCTT 12500 379 2.28e-05 GAGGGGTACA AATCTCATCATC GCGAGTTGAA 11613 473 2.28e-05 AACTCTCACT CGCCTCCGCCAC ACCACCCTAC 261516 485 2.84e-05 TCTTCTTTCT CATCATATCCAC CGTG 11700 442 3.05e-05 AAGTCGGGAG CACCTTTGCATC CTCCTGGCGG 263540 146 6.59e-05 GAGGGAAGCC AATCTCTTGAAC GAGAGCGGAG 261716 23 6.59e-05 GCCGGACAGG CATCACCTGTTC CGTCGAGGAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 20702 6.1e-08 476_[+1]_12 6715 4.7e-07 98_[+1]_390 4336 9.6e-07 96_[+1]_392 24063 5.1e-06 418_[+1]_70 4590 1e-05 386_[+1]_102 4423 1.2e-05 474_[+1]_14 29139 1.2e-05 149_[+1]_339 263092 1.2e-05 444_[+1]_44 6768 1.3e-05 29_[+1]_459 bd879 2.3e-05 485_[+1]_3 264851 2.3e-05 395_[+1]_93 12500 2.3e-05 378_[+1]_110 11613 2.3e-05 472_[+1]_16 261516 2.8e-05 484_[+1]_4 11700 3e-05 441_[+1]_47 263540 6.6e-05 145_[+1]_343 261716 6.6e-05 22_[+1]_466 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 1 width=12 seqs=17 20702 ( 477) CACCACCTCCAC 1 6715 ( 99) CATCACCTCCAC 1 4336 ( 97) CATCACTTCCTC 1 24063 ( 419) AACCACTTCATC 1 4590 ( 387) AACCACCGCAAC 1 4423 ( 475) CTGCACCTCCAC 1 29139 ( 150) CTCCTCTGCCTC 1 263092 ( 445) CACCACCACAAC 1 6768 ( 30) CTGCTCCTCCAC 1 bd879 ( 486) CACCGCATCATC 1 264851 ( 396) CACCTGTTCATC 1 12500 ( 379) AATCTCATCATC 1 11613 ( 473) CGCCTCCGCCAC 1 261516 ( 485) CATCATATCCAC 1 11700 ( 442) CACCTTTGCATC 1 263540 ( 146) AATCTCTTGAAC 1 261716 ( 23) CATCACCTGTTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 8802 bayes= 9.80923 E= 1.5e-002 -29 180 -1073 -1073 141 -1073 -203 -51 -1073 127 -103 48 -1073 218 -1073 -1073 88 -1073 -203 71 -1073 190 -203 -110 -70 110 -1073 48 -228 -1073 -3 148 -1073 200 -103 -1073 71 110 -1073 -210 88 -1073 -1073 90 -1073 218 -1073 -1073 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 17 E= 1.5e-002 0.235294 0.764706 0.000000 0.000000 0.764706 0.000000 0.058824 0.176471 0.000000 0.529412 0.117647 0.352941 0.000000 1.000000 0.000000 0.000000 0.529412 0.000000 0.058824 0.411765 0.000000 0.823529 0.058824 0.117647 0.176471 0.470588 0.000000 0.352941 0.058824 0.000000 0.235294 0.705882 0.000000 0.882353 0.117647 0.000000 0.470588 0.470588 0.000000 0.058824 0.529412 0.000000 0.000000 0.470588 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 regular expression -------------------------------------------------------------------------------- [CA]A[CT]C[AT]C[CT][TG]C[AC][AT]C -------------------------------------------------------------------------------- Time 3.89 secs. ******************************************************************************** ******************************************************************************** MOTIF 2 MEME width = 21 sites = 17 llr = 194 E-value = 1.3e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif 2 Description -------------------------------------------------------------------------------- Simplified A :1:121321:12:41:234:7 pos.-specific C 131121:2::2:1454:::11 probability G 9::452521a4192246429: matrix T :69526248:371122234:2 bits 2.2 2.0 * 1.7 * * * 1.5 * * * * Relative 1.3 * * * * * Entropy 1.1 * * ** * * (16.5 bits) 0.9 * * ** ** ** 0.7 *** * ** ** * ** 0.4 **** ** ** ** ****** 0.2 ******* ************* 0.0 --------------------- Multilevel GTTTGTGTTGGTGACGGGAGA consensus C G GAA TA CTC AT T sequence C C G T T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------------- 261516 53 1.29e-10 GCTTCGTCAC GTTTGTTTTGGTGCCCGGAGA AAAATTATCT 24063 355 6.31e-08 CTGTGCGGTT GCTTGTAGTGTTGACGAGAGA ATCTTGTTGA 263092 87 1.05e-07 GGGTGCTGGT GCTGGTGCTGGTGCTGATGGA TCTGGAGTCC 264851 277 3.39e-07 TGTGCCACTT GTTTGGGGTGTTGATTTATGA ATTATTTGCA 4590 36 3.79e-07 TGGTTGTCAT GTTATTAATGGTGGCCTGTGA AGAAGGAAGA 12500 335 6.40e-07 ACGAAAGAAG GCTGCTGCTGCTGTGTGGTGA TGGAGGAGGA 20702 45 1.05e-06 CTGTAACTGC GCTGTCGATGTTGACGGTGGA TGATAGGTGC 17593 382 1.05e-06 TTCAGGCGCC GTTAGTTTGGGAGGCCGTTGA ATCCAATACA 6715 120 1.27e-06 CTTGATATTC GTTTGTGCAGCAGAAGGGAGA CCCGTCAGTT bd879 207 2.00e-06 GAGATTTTTT GATTAGATTGCTGCTTGATGA ATAGGATAAC 6768 193 3.35e-06 GCGATGCTTA CTTTATGTTGCAGACTAATGA ATGTTTGAGT 11700 243 3.35e-06 AATCATCTTT GTTGCGGGTGTTGAACTGAGT ACTGTTTAGA 4423 119 1.22e-05 GGCTTCGTTG GTTTCGTATGGTTGGGGTTGT AATTGATGTA 261716 51 1.60e-05 GGAATTTCAT GTTGATGTTGAGGCGGGGAGC TTCGAGGGCC 4336 444 1.82e-05 TTTCTCTTTT GTCCTAGTTGGTGCCCGTAGT TCACCTTTCA 263540 179 1.95e-05 ACGAGTGGAT GATGGTACGGGAGGTGGAGGT AAGAAGAAGA 11613 294 2.66e-05 CAAGGCTCAT CCTTGTAATGTTCCCCGAACA AAGATAACAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 261516 1.3e-10 52_[+2]_427 24063 6.3e-08 354_[+2]_125 263092 1.1e-07 86_[+2]_393 264851 3.4e-07 276_[+2]_203 4590 3.8e-07 35_[+2]_444 12500 6.4e-07 334_[+2]_145 20702 1e-06 44_[+2]_435 17593 1e-06 381_[+2]_98 6715 1.3e-06 119_[+2]_360 bd879 2e-06 206_[+2]_273 6768 3.4e-06 192_[+2]_287 11700 3.4e-06 242_[+2]_237 4423 1.2e-05 118_[+2]_361 261716 1.6e-05 50_[+2]_429 4336 1.8e-05 443_[+2]_36 263540 1.9e-05 178_[+2]_301 11613 2.7e-05 293_[+2]_186 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 2 width=21 seqs=17 261516 ( 53) GTTTGTTTTGGTGCCCGGAGA 1 24063 ( 355) GCTTGTAGTGTTGACGAGAGA 1 263092 ( 87) GCTGGTGCTGGTGCTGATGGA 1 264851 ( 277) GTTTGGGGTGTTGATTTATGA 1 4590 ( 36) GTTATTAATGGTGGCCTGTGA 1 12500 ( 335) GCTGCTGCTGCTGTGTGGTGA 1 20702 ( 45) GCTGTCGATGTTGACGGTGGA 1 17593 ( 382) GTTAGTTTGGGAGGCCGTTGA 1 6715 ( 120) GTTTGTGCAGCAGAAGGGAGA 1 bd879 ( 207) GATTAGATTGCTGCTTGATGA 1 6768 ( 193) CTTTATGTTGCAGACTAATGA 1 11700 ( 243) GTTGCGGGTGTTGAACTGAGT 1 4423 ( 119) GTTTCGTATGGTTGGGGTTGT 1 261716 ( 51) GTTGATGTTGAGGCGGGGAGC 1 4336 ( 444) GTCCTAGTTGGTGCCCGTAGT 1 263540 ( 179) GATGGTACGGGAGGTGGAGGT 1 11613 ( 294) CCTTGTAATGTTCCCCGAACA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 8640 bayes= 9.05619 E= 1.3e-001 -1073 -90 187 -1073 -129 42 -1073 122 -1073 -190 -1073 190 -129 -190 55 90 -70 -32 97 -51 -228 -190 -3 136 4 -1073 114 -51 -29 10 -45 48 -228 -1073 -103 171 -1073 -1073 205 -1073 -228 10 77 22 -29 -1073 -203 148 -1073 -190 187 -210 30 68 -3 -210 -129 110 -45 -10 -1073 68 77 -10 -70 -1073 143 -51 4 -1073 77 22 52 -1073 -45 71 -1073 -190 197 -1073 130 -190 -1073 -10 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 17 E= 1.3e-001 0.000000 0.117647 0.882353 0.000000 0.117647 0.294118 0.000000 0.588235 0.000000 0.058824 0.000000 0.941176 0.117647 0.058824 0.352941 0.470588 0.176471 0.176471 0.470588 0.176471 0.058824 0.058824 0.235294 0.647059 0.294118 0.000000 0.529412 0.176471 0.235294 0.235294 0.176471 0.352941 0.058824 0.000000 0.117647 0.823529 0.000000 0.000000 1.000000 0.000000 0.058824 0.235294 0.411765 0.294118 0.235294 0.000000 0.058824 0.705882 0.000000 0.058824 0.882353 0.058824 0.352941 0.352941 0.235294 0.058824 0.117647 0.470588 0.176471 0.235294 0.000000 0.352941 0.411765 0.235294 0.176471 0.000000 0.647059 0.176471 0.294118 0.000000 0.411765 0.294118 0.411765 0.000000 0.176471 0.411765 0.000000 0.058824 0.941176 0.000000 0.705882 0.058824 0.000000 0.235294 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 regular expression -------------------------------------------------------------------------------- G[TC]T[TG]G[TG][GA][TAC]TG[GTC][TA]G[ACG][CT][GCT]G[GAT][AT]G[AT] -------------------------------------------------------------------------------- Time 7.46 secs. ******************************************************************************** ******************************************************************************** MOTIF 3 MEME width = 21 sites = 8 llr = 128 E-value = 1.6e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif 3 Description -------------------------------------------------------------------------------- Simplified A :5a1:65:413a1:953a4:9 pos.-specific C a1:4:351181:8::1::41: probability G :4::9::5413:1a:48:39: matrix T :::511:41:4:::1:::::1 bits 2.2 * 2.0 * * 1.7 * * * * * 1.5 * * * * * * * Relative 1.3 * * * * ** * ** Entropy 1.1 * * * * * **** ** ** (23.2 bits) 0.9 * * * * * **** ** ** 0.7 * ****** * **** ** ** 0.4 ******** * ********** 0.2 ********** ********** 0.0 --------------------- Multilevel CAATGAAGACTACGAAGAAGA consensus G C CCTG A GA C sequence G G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------------- 29139 219 5.22e-10 CCGACTACGA CCATGAATACTACGAAGACGA AGCATTCGAT bd879 412 1.78e-09 CAATCTCGGT CAATGACGACGACGAGGAACA GACAGCTGCC 12500 455 5.63e-09 GAGAAGGGAT CGACGAAGACGAAGAAGAAGA AGGGGCAAGT 4590 404 1.36e-08 GCAACCACCG CAACGACCGCAACGACAACGA ACGCGAACAT 261716 107 2.13e-08 TGGCCTCCTC CGACGCAGCCTACGAGGAGGT TGGTTGGGGA 264851 124 6.74e-08 TATTCACCAG CGATTTCTTCAACGAGGAAGA TGAGAAGAAC 263540 350 1.14e-07 GGATGCGATG CAATGCATGATACGTAAACGA AACTAGTCTA 6768 352 1.37e-07 TTTCATACGA CAAAGACGGGCAGGAAGAGGA GCCACTCATT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 29139 5.2e-10 218_[+3]_261 bd879 1.8e-09 411_[+3]_68 12500 5.6e-09 454_[+3]_25 4590 1.4e-08 403_[+3]_76 261716 2.1e-08 106_[+3]_373 264851 6.7e-08 123_[+3]_356 263540 1.1e-07 349_[+3]_130 6768 1.4e-07 351_[+3]_128 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 3 width=21 seqs=8 29139 ( 219) CCATGAATACTACGAAGACGA 1 bd879 ( 412) CAATGACGACGACGAGGAACA 1 12500 ( 455) CGACGAAGACGAAGAAGAAGA 1 4590 ( 404) CAACGACCGCAACGACAACGA 1 261716 ( 107) CGACGCAGCCTACGAGGAGGT 1 264851 ( 124) CGATTTCTTCAACGAGGAAGA 1 263540 ( 350) CAATGCATGATACGTAAACGA 1 6768 ( 352) CAAAGACGGGCAGGAAGAGGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 8640 bayes= 10.0755 E= 1.6e+001 -965 218 -965 -965 80 -82 64 -965 180 -965 -965 -965 -120 77 -965 99 -965 -965 186 -101 112 18 -965 -101 80 118 -965 -965 -965 -82 105 57 39 -82 64 -101 -120 177 -94 -965 -20 -82 5 57 180 -965 -965 -965 -120 177 -94 -965 -965 -965 205 -965 161 -965 -965 -101 80 -82 64 -965 -20 -965 164 -965 180 -965 -965 -965 39 77 5 -965 -965 -82 186 -965 161 -965 -965 -101 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 8 E= 1.6e+001 0.000000 1.000000 0.000000 0.000000 0.500000 0.125000 0.375000 0.000000 1.000000 0.000000 0.000000 0.000000 0.125000 0.375000 0.000000 0.500000 0.000000 0.000000 0.875000 0.125000 0.625000 0.250000 0.000000 0.125000 0.500000 0.500000 0.000000 0.000000 0.000000 0.125000 0.500000 0.375000 0.375000 0.125000 0.375000 0.125000 0.125000 0.750000 0.125000 0.000000 0.250000 0.125000 0.250000 0.375000 1.000000 0.000000 0.000000 0.000000 0.125000 0.750000 0.125000 0.000000 0.000000 0.000000 1.000000 0.000000 0.875000 0.000000 0.000000 0.125000 0.500000 0.125000 0.375000 0.000000 0.250000 0.000000 0.750000 0.000000 1.000000 0.000000 0.000000 0.000000 0.375000 0.375000 0.250000 0.000000 0.000000 0.125000 0.875000 0.000000 0.875000 0.000000 0.000000 0.125000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 regular expression -------------------------------------------------------------------------------- C[AG]A[TC]G[AC][AC][GT][AG]C[TAG]ACGA[AG][GA]A[ACG]GA -------------------------------------------------------------------------------- Time 10.81 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 11613 5.03e-03 293_[+2(2.66e-05)]_158_\ [+1(2.28e-05)]_16 11700 6.75e-04 242_[+2(3.35e-06)]_178_\ [+1(3.05e-05)]_47 12500 3.22e-09 334_[+2(6.40e-07)]_23_\ [+1(2.28e-05)]_64_[+3(5.63e-09)]_25 17593 1.15e-02 381_[+2(1.05e-06)]_98 20702 4.61e-07 44_[+2(1.05e-06)]_239_\ [+2(8.00e-05)]_151_[+1(6.14e-08)]_12 24063 6.36e-06 206_[+1(3.84e-05)]_136_\ [+2(6.31e-08)]_43_[+1(5.14e-06)]_70 261516 1.61e-07 9_[+2(5.59e-05)]_22_[+2(1.29e-10)]_\ 411_[+1(2.84e-05)]_4 261716 5.38e-07 22_[+1(6.59e-05)]_16_[+2(1.60e-05)]_\ 35_[+3(2.13e-08)]_373 263092 5.23e-06 86_[+2(1.05e-07)]_337_\ [+1(1.24e-05)]_44 263540 2.91e-06 145_[+1(6.59e-05)]_21_\ [+2(1.95e-05)]_150_[+3(1.14e-07)]_130 264851 1.77e-08 123_[+3(6.74e-08)]_132_\ [+2(3.39e-07)]_98_[+1(2.28e-05)]_93 29139 2.90e-07 149_[+1(1.24e-05)]_57_\ [+3(5.22e-10)]_261 4336 6.58e-05 49_[+1(1.12e-05)]_35_[+1(9.55e-07)]_\ 335_[+2(1.82e-05)]_36 4423 1.74e-03 118_[+2(1.22e-05)]_335_\ [+1(1.24e-05)]_14 4590 2.12e-09 35_[+2(3.79e-07)]_330_\ [+1(1.01e-05)]_5_[+3(1.36e-08)]_76 6715 9.87e-06 98_[+1(4.68e-07)]_9_[+2(1.27e-06)]_\ 360 6768 1.70e-07 29_[+1(1.35e-05)]_151_\ [+2(3.35e-06)]_138_[+3(1.37e-07)]_128 bd879 3.18e-09 93_[+3(2.36e-05)]_92_[+2(2.00e-06)]_\ 184_[+3(1.78e-09)]_53_[+1(2.28e-05)]_3 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because nmotifs = 3 reached. ******************************************************************************** CPU: seaotter.hsd1.wa.comcast.net ********************************************************************************