******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.10.0 (Release date: Wed May 21 10:35:36 2014 +1000) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net. This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme.nbcr.net. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= motifs/282/282.seqs.fa ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ 11115 1.0000 500 11612 1.0000 500 21809 1.0000 500 23831 1.0000 500 24140 1.0000 500 24361 1.0000 500 25462 1.0000 500 262152 1.0000 500 264704 1.0000 500 264805 1.0000 500 2663 1.0000 500 268986 1.0000 500 31846 1.0000 500 35084 1.0000 500 35527 1.0000 500 3563 1.0000 500 7329 1.0000 500 7699 1.0000 500 8183 1.0000 500 bd1080 1.0000 500 bd1327 1.0000 500 ThpsCp027 1.0000 500 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme motifs/282/282.seqs.fa -oc motifs/282 -dna -minw 12 -maxw 21 -nmotifs 3 -maxsize 500000 model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 12 maxw= 21 minic= 0.00 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 22 wnsites= 0.8 theta: prob= 1 spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 11000 N= 22 strands: + sample: seed= 0 seqfrac= 1 Letter frequencies in dataset: A 0.276 C 0.237 G 0.221 T 0.267 Background letter frequencies (from dataset with add-one prior applied): A 0.276 C 0.237 G 0.221 T 0.267 ******************************************************************************** ******************************************************************************** MOTIF 1 MEME width = 16 sites = 15 llr = 179 E-value = 5.0e-004 ******************************************************************************** -------------------------------------------------------------------------------- Motif 1 Description -------------------------------------------------------------------------------- Simplified A 73725238::a73317 pos.-specific C :1:::::11::::2:: probability G 34:83171:a::7192 matrix T :13:27::9::314:1 bits 2.2 * 2.0 ** 1.7 ** * 1.5 *** * Relative 1.3 * *** * Entropy 1.1 * ** ****** * (17.2 bits) 0.9 * ** ******* * 0.7 * ** ******** ** 0.4 * *********** ** 0.2 ************* ** 0.0 ---------------- Multilevel AGAGATGATGAAGTGA consensus GATAGAA TAA G sequence T C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ---------------- bd1080 91 4.80e-09 AATACCTAGC AGAGATGATGAAATGA CACATCAATA 8183 91 4.80e-09 AATACCTAGC AGAGATGATGAAATGA CACATCAATA ThpsCp027 157 2.23e-08 GGCTTAGATA AAAGATAATGAAGAGA GAAATCAATA bd1327 112 2.23e-08 GGCTTAGATA AAAGATAATGAAGAGA GAAATCAATA 264704 472 4.30e-07 TACCGATACT AGTGGAGATGAAGTGG AAGTACTCAT 24140 138 4.83e-07 TTTAGGTTGT GGAGGTGATGAAGGGT GCCCAAAGAA 25462 33 1.62e-06 AAGAACACGC GATGATGATGATGTGT TCAGTATTTG 3563 14 2.91e-06 CACACCAATA AAAAGAGATGAAACGA CCGACCAATA 7699 138 3.15e-06 ATGAGAGAGG AGAGAGGACGATGCGA GGGCTCTCTT 35527 207 3.15e-06 TTGCAAATGG AGAGGGAGTGAAGAGA TCTTTCTGTC 268986 271 5.66e-06 TCTTCGTCGT ATTATTGATGAAGAGG AGGATACTGA 11115 85 6.07e-06 CGATCCATAC ACAGTTGCTGAATTGA CGGCTCTGCA 262152 99 6.49e-06 TGAGACAAGG GAAAATAATGATACGA GGAGATTGGA 31846 134 8.39e-06 ATTCGGTGAT GCTGTTGATGAAGTAA TCGATTGAAG 24361 443 1.82e-05 AAAACGCATC ATAGAAACTGATGGGG TGAATACAAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- bd1080 4.8e-09 90_[+1]_394 8183 4.8e-09 90_[+1]_394 ThpsCp027 2.2e-08 156_[+1]_328 bd1327 2.2e-08 111_[+1]_373 264704 4.3e-07 471_[+1]_13 24140 4.8e-07 137_[+1]_347 25462 1.6e-06 32_[+1]_452 3563 2.9e-06 13_[+1]_471 7699 3.1e-06 137_[+1]_347 35527 3.1e-06 206_[+1]_278 268986 5.7e-06 270_[+1]_214 11115 6.1e-06 84_[+1]_400 262152 6.5e-06 98_[+1]_386 31846 8.4e-06 133_[+1]_351 24361 1.8e-05 442_[+1]_42 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 1 width=16 seqs=15 bd1080 ( 91) AGAGATGATGAAATGA 1 8183 ( 91) AGAGATGATGAAATGA 1 ThpsCp027 ( 157) AAAGATAATGAAGAGA 1 bd1327 ( 112) AAAGATAATGAAGAGA 1 264704 ( 472) AGTGGAGATGAAGTGG 1 24140 ( 138) GGAGGTGATGAAGGGT 1 25462 ( 33) GATGATGATGATGTGT 1 3563 ( 14) AAAAGAGATGAAACGA 1 7699 ( 138) AGAGAGGACGATGCGA 1 35527 ( 207) AGAGGGAGTGAAGAGA 1 268986 ( 271) ATTATTGATGAAGAGG 1 11115 ( 85) ACAGTTGCTGAATTGA 1 262152 ( 99) GAAAATAATGATACGA 1 31846 ( 134) GCTGTTGATGAAGTAA 1 24361 ( 443) ATAGAAACTGATGGGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 10670 bayes= 10.1473 E= 5.0e-004 141 -1055 27 -1055 27 -83 86 -100 141 -1055 -1055 0 -46 -1055 186 -1055 95 -1055 27 -41 -46 -1055 -73 132 27 -1055 159 -1055 154 -83 -173 -1055 -1055 -183 -1055 181 -1055 -1055 218 -1055 186 -1055 -1055 -1055 141 -1055 -1055 0 -5 -1055 159 -200 -5 -24 -73 58 -204 -1055 208 -1055 127 -1055 -14 -100 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 15 E= 5.0e-004 0.733333 0.000000 0.266667 0.000000 0.333333 0.133333 0.400000 0.133333 0.733333 0.000000 0.000000 0.266667 0.200000 0.000000 0.800000 0.000000 0.533333 0.000000 0.266667 0.200000 0.200000 0.000000 0.133333 0.666667 0.333333 0.000000 0.666667 0.000000 0.800000 0.133333 0.066667 0.000000 0.000000 0.066667 0.000000 0.933333 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.733333 0.000000 0.000000 0.266667 0.266667 0.000000 0.666667 0.066667 0.266667 0.200000 0.133333 0.400000 0.066667 0.000000 0.933333 0.000000 0.666667 0.000000 0.200000 0.133333 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 regular expression -------------------------------------------------------------------------------- [AG][GA][AT][GA][AGT][TA][GA]ATGA[AT][GA][TAC]G[AG] -------------------------------------------------------------------------------- Time 4.49 secs. ******************************************************************************** ******************************************************************************** MOTIF 2 MEME width = 20 sites = 18 llr = 213 E-value = 5.9e-003 ******************************************************************************** -------------------------------------------------------------------------------- Motif 2 Description -------------------------------------------------------------------------------- Simplified A ::3:46:3534169427227 pos.-specific C 36:832a644284:42:881 probability G :312:3:11:11::231::: matrix T 716:2::1:34::1:32:12 bits 2.2 * 2.0 * 1.7 * 1.5 * * Relative 1.3 * * * * Entropy 1.1 * * * * * ** (17.0 bits) 0.9 ** * * *** **** 0.7 **** ** * *** **** 0.4 ********** **** **** 0.2 *************** **** 0.0 -------------------- Multilevel TCTCAACCACACAACTACCA consensus CGAGCG ACAT C AGTA T sequence T T C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------------------- 24361 355 1.79e-09 CCTAGCCAGT TCTCTACCACACCAAGACCA ATCAACAACA bd1080 408 3.16e-08 TCATCAGAAA TCACAACCCATCCAATTCCA ATGCTTACTT 8183 408 3.16e-08 TCATCAGAAA TCACAACCCATCCAATTCCA ATGCTTACTT 2663 372 9.84e-08 CTCGGGCCGC CCACCGCCCACCCACGACCA CCACCAAGCG 7699 301 3.76e-07 GACGTCCATC CGGCCACCCCACAAATACCT CCGACCTCCG 3563 255 5.19e-07 GCTGCATTGC TCTCACCTCCTCCACAACCA CCCACAACAG 264805 437 6.39e-07 CAACGATTTC TCTGCACAATCCAACCAACA ATCCTCTCGA 25462 260 1.27e-06 AAATCGAAAC TGTCAGCCAAAACAGAACCA ACTCCTTGCT 35527 475 1.82e-06 CCTCTCACAA TCTGAACAACACCAGCGCCA TCAAAC 11612 256 1.99e-06 ACCTTCGACA TTTCTGCCATTCAACGACAA GTAAATTCAG ThpsCp027 304 3.02e-06 AAAGTTTAAC TCTCTACAAATGAAATAACT TACGGGAATT bd1327 259 3.02e-06 AAAGTTTAAC TCTCTACAAATGAAATAACT TACGGGAATT 11115 358 3.02e-06 CACACTAGAG CCACCACCGCACAACGACTA ATACTAACAT 24140 440 3.55e-06 TGTCACATCC TGTCACCAATGCAACCACAA CCAACCACTT 35084 142 6.91e-06 TGTCTGCCGG CCACCGCCACTCATCAACAA CACGCCTCTC 21809 260 7.41e-06 GTTTGATTGA TGGCACCACTACAAGTTCCT CACCTTGGGG 262152 235 1.03e-05 CGAGCCGACC CGTGAACCCTCCAAAGAACC AACCCGCCTT 23831 444 1.78e-05 GAGAGCGACC TGAGCGCGCCAAAACCTCCA CCGCTTCCAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 24361 1.8e-09 354_[+2]_126 bd1080 3.2e-08 407_[+2]_73 8183 3.2e-08 407_[+2]_73 2663 9.8e-08 371_[+2]_109 7699 3.8e-07 300_[+2]_180 3563 5.2e-07 254_[+2]_226 264805 6.4e-07 436_[+2]_44 25462 1.3e-06 259_[+2]_221 35527 1.8e-06 474_[+2]_6 11612 2e-06 255_[+2]_225 ThpsCp027 3e-06 303_[+2]_177 bd1327 3e-06 258_[+2]_222 11115 3e-06 357_[+2]_123 24140 3.5e-06 439_[+2]_41 35084 6.9e-06 141_[+2]_339 21809 7.4e-06 259_[+2]_221 262152 1e-05 234_[+2]_246 23831 1.8e-05 443_[+2]_37 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 2 width=20 seqs=18 24361 ( 355) TCTCTACCACACCAAGACCA 1 bd1080 ( 408) TCACAACCCATCCAATTCCA 1 8183 ( 408) TCACAACCCATCCAATTCCA 1 2663 ( 372) CCACCGCCCACCCACGACCA 1 7699 ( 301) CGGCCACCCCACAAATACCT 1 3563 ( 255) TCTCACCTCCTCCACAACCA 1 264805 ( 437) TCTGCACAATCCAACCAACA 1 25462 ( 260) TGTCAGCCAAAACAGAACCA 1 35527 ( 475) TCTGAACAACACCAGCGCCA 1 11612 ( 256) TTTCTGCCATTCAACGACAA 1 ThpsCp027 ( 304) TCTCTACAAATGAAATAACT 1 bd1327 ( 259) TCTCTACAAATGAAATAACT 1 11115 ( 358) CCACCACCGCACAACGACTA 1 24140 ( 440) TGTCACCAATGCAACCACAA 1 35084 ( 142) CCACCGCCACTCATCAACAA 1 21809 ( 260) TGGCACCACTACAAGTTCCT 1 262152 ( 235) CGTGAACCCTCCAAAGAACC 1 23831 ( 444) TGAGCGCGCCAAAACCTCCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 20 n= 10582 bayes= 9.33146 E= 5.9e-003 -1081 23 -1081 144 -1081 137 59 -226 27 -1081 -99 106 -1081 171 1 -1081 69 49 -1081 -26 101 -51 33 -1081 -1081 208 -1081 -1081 27 123 -199 -226 86 91 -199 -1081 27 71 -1081 6 50 -51 -199 54 -131 171 -99 -1081 115 71 -1081 -1081 178 -1081 -1081 -226 50 91 -41 -1081 -73 -9 33 32 139 -1081 -199 -26 -31 171 -1081 -1081 -73 171 -1081 -226 139 -209 -1081 -26 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 20 nsites= 18 E= 5.9e-003 0.000000 0.277778 0.000000 0.722222 0.000000 0.611111 0.333333 0.055556 0.333333 0.000000 0.111111 0.555556 0.000000 0.777778 0.222222 0.000000 0.444444 0.333333 0.000000 0.222222 0.555556 0.166667 0.277778 0.000000 0.000000 1.000000 0.000000 0.000000 0.333333 0.555556 0.055556 0.055556 0.500000 0.444444 0.055556 0.000000 0.333333 0.388889 0.000000 0.277778 0.388889 0.166667 0.055556 0.388889 0.111111 0.777778 0.111111 0.000000 0.611111 0.388889 0.000000 0.000000 0.944444 0.000000 0.000000 0.055556 0.388889 0.444444 0.166667 0.000000 0.166667 0.222222 0.277778 0.333333 0.722222 0.000000 0.055556 0.222222 0.222222 0.777778 0.000000 0.000000 0.166667 0.777778 0.000000 0.055556 0.722222 0.055556 0.000000 0.222222 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 regular expression -------------------------------------------------------------------------------- [TC][CG][TA][CG][ACT][AG]C[CA][AC][CAT][AT]C[AC]A[CA][TGC][AT][CA]C[AT] -------------------------------------------------------------------------------- Time 8.41 secs. ******************************************************************************** ******************************************************************************** MOTIF 3 MEME width = 21 sites = 7 llr = 129 E-value = 1.5e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif 3 Description -------------------------------------------------------------------------------- Simplified A ::::::::77::::496:::: pos.-specific C :::3311:1:441:6:3:1:3 probability G 11:7::3:136::3:11:::: matrix T 99a:796a:::697:::a9a7 bits 2.2 2.0 * * * * 1.7 * * * * 1.5 * * * * Relative 1.3 **** * * * * *** Entropy 1.1 ****** * ******* **** (26.5 bits) 0.9 ****** ********* **** 0.7 ********************* 0.4 ********************* 0.2 ********************* 0.0 --------------------- Multilevel TTTGTTTTAAGTTTCAATTTT consensus CC G GCC GA C C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------------- ThpsCp027 107 2.59e-12 AGATATTTAA TTTGTTTTAAGTTTAAATTTT TTATAAAAGA bd1327 62 2.59e-12 AGATATTTAA TTTGTTTTAAGTTTAAATTTT TTATAAAAGA bd1080 348 2.32e-09 CAACGATACC TTTGCTTTAGCCTGCACTTTC ATCCCATACA 8183 348 2.32e-09 CAACGATACC TTTGCTTTAGCCTGCACTTTC ATCCCATACA 23831 248 8.21e-09 GTGGGTTTGC TGTCTTGTAACTTTAGATTTT CCGGACGGAC 21809 386 9.87e-09 CTTGACTCAC TTTCTCGTGAGTTTCAGTTTT GTTGCTTCCC 35084 112 3.48e-08 ACGCTGGATC GTTGTTCTCAGCCTCAATCTT GTCTGCCGGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- ThpsCp027 2.6e-12 106_[+3]_373 bd1327 2.6e-12 61_[+3]_418 bd1080 2.3e-09 347_[+3]_132 8183 2.3e-09 347_[+3]_132 23831 8.2e-09 247_[+3]_232 21809 9.9e-09 385_[+3]_94 35084 3.5e-08 111_[+3]_368 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 3 width=21 seqs=7 ThpsCp027 ( 107) TTTGTTTTAAGTTTAAATTTT 1 bd1327 ( 62) TTTGTTTTAAGTTTAAATTTT 1 bd1080 ( 348) TTTGCTTTAGCCTGCACTTTC 1 8183 ( 348) TTTGCTTTAGCCTGCACTTTC 1 23831 ( 248) TGTCTTGTAACTTTAGATTTT 1 21809 ( 386) TTTCTCGTGAGTTTCAGTTTT 1 35084 ( 112) GTTGTTCTCAGCCTCAATCTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 10560 bayes= 9.53656 E= 1.5e-001 -945 -945 -63 168 -945 -945 -63 168 -945 -945 -945 191 -945 27 169 -945 -945 27 -945 142 -945 -73 -945 168 -945 -73 37 110 -945 -945 -945 191 137 -73 -63 -945 137 -945 37 -945 -945 85 137 -945 -945 85 -945 110 -945 -73 -945 168 -945 -945 37 142 64 127 -945 -945 164 -945 -63 -945 105 27 -63 -945 -945 -945 -945 191 -945 -73 -945 168 -945 -945 -945 191 -945 27 -945 142 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 7 E= 1.5e-001 0.000000 0.000000 0.142857 0.857143 0.000000 0.000000 0.142857 0.857143 0.000000 0.000000 0.000000 1.000000 0.000000 0.285714 0.714286 0.000000 0.000000 0.285714 0.000000 0.714286 0.000000 0.142857 0.000000 0.857143 0.000000 0.142857 0.285714 0.571429 0.000000 0.000000 0.000000 1.000000 0.714286 0.142857 0.142857 0.000000 0.714286 0.000000 0.285714 0.000000 0.000000 0.428571 0.571429 0.000000 0.000000 0.428571 0.000000 0.571429 0.000000 0.142857 0.000000 0.857143 0.000000 0.000000 0.285714 0.714286 0.428571 0.571429 0.000000 0.000000 0.857143 0.000000 0.142857 0.000000 0.571429 0.285714 0.142857 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.142857 0.000000 0.857143 0.000000 0.000000 0.000000 1.000000 0.000000 0.285714 0.000000 0.714286 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 regular expression -------------------------------------------------------------------------------- TTT[GC][TC]T[TG]TA[AG][GC][TC]T[TG][CA]A[AC]TTT[TC] -------------------------------------------------------------------------------- Time 12.31 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 11115 2.48e-04 84_[+1(6.07e-06)]_257_\ [+2(3.02e-06)]_123 11612 2.59e-03 255_[+2(1.99e-06)]_225 21809 2.80e-06 259_[+2(7.41e-06)]_106_\ [+3(9.87e-09)]_94 23831 2.35e-06 247_[+3(8.21e-09)]_175_\ [+2(1.78e-05)]_37 24140 3.29e-05 137_[+1(4.83e-07)]_286_\ [+2(3.55e-06)]_41 24361 1.39e-07 354_[+2(1.79e-09)]_68_\ [+1(1.82e-05)]_42 25462 5.73e-05 32_[+1(1.62e-06)]_211_\ [+2(1.27e-06)]_221 262152 5.10e-04 98_[+1(6.49e-06)]_120_\ [+2(1.03e-05)]_246 264704 5.50e-03 471_[+1(4.30e-07)]_13 264805 6.24e-03 436_[+2(6.39e-07)]_44 2663 2.26e-05 203_[+3(9.62e-05)]_147_\ [+2(9.84e-08)]_109 268986 5.88e-03 270_[+1(5.66e-06)]_214 31846 5.16e-03 133_[+1(8.39e-06)]_351 35084 2.07e-06 111_[+3(3.48e-08)]_9_[+2(6.91e-06)]_\ 339 35527 1.23e-04 206_[+1(3.15e-06)]_252_\ [+2(1.82e-06)]_6 3563 1.15e-05 13_[+1(2.91e-06)]_225_\ [+2(5.19e-07)]_226 7329 2.42e-01 322_[+3(9.09e-05)]_157 7699 2.85e-05 137_[+1(3.15e-06)]_147_\ [+2(3.76e-07)]_180 8183 2.97e-14 90_[+1(4.80e-09)]_241_\ [+3(2.32e-09)]_39_[+2(3.16e-08)]_73 bd1080 2.97e-14 90_[+1(4.80e-09)]_241_\ [+3(2.32e-09)]_39_[+2(3.16e-08)]_73 bd1327 1.52e-14 61_[+3(2.59e-12)]_29_[+1(2.23e-08)]_\ 131_[+2(3.02e-06)]_222 ThpsCp027 1.52e-14 106_[+3(2.59e-12)]_29_\ [+1(2.23e-08)]_131_[+2(3.02e-06)]_177 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because nmotifs = 3 reached. ******************************************************************************** CPU: seaotter.hsd1.wa.comcast.net ********************************************************************************