******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.10.0 (Release date: Wed May 21 10:35:36 2014 +1000) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net. This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme.nbcr.net. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= motifs/304/304.seqs.fa ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ 10325 1.0000 500 10501 1.0000 500 10768 1.0000 500 11685 1.0000 500 11688 1.0000 500 11712 1.0000 500 11743 1.0000 500 1726 1.0000 500 1758 1.0000 500 2052 1.0000 500 21416 1.0000 500 22488 1.0000 500 22758 1.0000 500 24576 1.0000 500 25170 1.0000 500 261610 1.0000 500 263128 1.0000 500 264152 1.0000 500 31358 1.0000 500 3389 1.0000 500 36664 1.0000 500 3979 1.0000 500 4575 1.0000 500 4713 1.0000 500 4969 1.0000 500 5089 1.0000 500 5351 1.0000 500 5658 1.0000 500 5970 1.0000 500 7200 1.0000 500 7207 1.0000 500 7821 1.0000 500 8375 1.0000 500 9079 1.0000 500 bd1891 1.0000 500 bd938 1.0000 500 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme motifs/304/304.seqs.fa -oc motifs/304 -dna -minw 12 -maxw 21 -nmotifs 3 -maxsize 500000 model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 12 maxw= 21 minic= 0.00 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 36 wnsites= 0.8 theta: prob= 1 spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 18000 N= 36 strands: + sample: seed= 0 seqfrac= 1 Letter frequencies in dataset: A 0.283 C 0.224 G 0.231 T 0.261 Background letter frequencies (from dataset with add-one prior applied): A 0.283 C 0.224 G 0.231 T 0.261 ******************************************************************************** ******************************************************************************** MOTIF 1 MEME width = 21 sites = 13 llr = 185 E-value = 1.6e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif 1 Description -------------------------------------------------------------------------------- Simplified A :4::225:2::4:3:::5::1 pos.-specific C a1:a:1:2::326131722:1 probability G :12:24543a:1::22:2::3 matrix T :58:64:55:744658318a5 bits 2.2 * * * 1.9 * * * * 1.7 * * * * 1.5 * * * * Relative 1.3 * ** * * ** Entropy 1.1 * ** * ** * ** ** (20.6 bits) 0.9 * ** * ** * ** ** 0.6 * *** ** ** ** ** ** 0.4 * *** ***** ***** *** 0.2 ********************* 0.0 --------------------- Multilevel CTTCTGGTTGTACTTTCATTT consensus AG GTAGG CTTAC TC G sequence A G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------------- 8375 348 1.17e-09 ACAACTTCTT CATCTGATTGTCCTCTCATTG ATGCTGTAGA 7821 343 2.41e-09 GGCTGCTGAT CTTCGTGTTGTACAGTCATTT TATGGTTGAC 4713 267 2.41e-09 GATAGATCTT CTTCTTGGGGTTCTTTTGTTT TGGTTGTTCG 10325 339 1.12e-08 AATAGTATCA CATCTTACAGTTCATTCATTT GCACACGTAT 264152 173 9.29e-08 AACCTCTTAA CTGCTTAGTGTTCTCGTCTTT TCTGACACAC 5351 398 1.36e-07 GTACCAATCG CTTCGGGGGGTGTTGTCGTTG TCCATAGTGA bd1891 1 1.49e-07 . CTTCTAGTAGCATTTTCATTA AACAGAGTTG 31358 55 2.31e-07 TCAAAGCCTG CATCTCATGGCATTTTCATTC ATTGTCTGTG 5658 460 2.94e-07 GTTTGAAAAA CTGCGAGGTGTTCATTCCCTT TTGAGAAAGT 2052 80 3.44e-07 CACGGTGGAG CGTCTGATGGTATCCTTATTT GTTACTATTT 22758 78 4.94e-07 TCATGATGAC CCGCTGGGTGCCCTCTCCCTT TCCTATAAAC 5089 16 6.88e-07 GATATTTACA CATCATGTTGCACATCTATTG TTCTTTCAAC 11712 446 1.88e-06 GTCGTGACGT CATCAGACAGTTTTGGCTTTG GCCAACTTGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 8375 1.2e-09 347_[+1]_132 7821 2.4e-09 342_[+1]_137 4713 2.4e-09 266_[+1]_213 10325 1.1e-08 338_[+1]_141 264152 9.3e-08 172_[+1]_307 5351 1.4e-07 397_[+1]_82 bd1891 1.5e-07 [+1]_479 31358 2.3e-07 54_[+1]_425 5658 2.9e-07 459_[+1]_20 2052 3.4e-07 79_[+1]_400 22758 4.9e-07 77_[+1]_402 5089 6.9e-07 15_[+1]_464 11712 1.9e-06 445_[+1]_34 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 1 width=21 seqs=13 8375 ( 348) CATCTGATTGTCCTCTCATTG 1 7821 ( 343) CTTCGTGTTGTACAGTCATTT 1 4713 ( 267) CTTCTTGGGGTTCTTTTGTTT 1 10325 ( 339) CATCTTACAGTTCATTCATTT 1 264152 ( 173) CTGCTTAGTGTTCTCGTCTTT 1 5351 ( 398) CTTCGGGGGGTGTTGTCGTTG 1 bd1891 ( 1) CTTCTAGTAGCATTTTCATTA 1 31358 ( 55) CATCTCATGGCATTTTCATTC 1 5658 ( 460) CTGCGAGGTGTTCATTCCCTT 1 2052 ( 80) CGTCTGATGGTATCCTTATTT 1 22758 ( 78) CCGCTGGGTGCCCTCTCCCTT 1 5089 ( 16) CATCATGTTGCACATCTATTG 1 11712 ( 446) CATCAGACAGTTTTGGCTTTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 17280 bayes= 10.9061 E= 1.6e-001 -1035 216 -1035 -1035 44 -154 -159 82 -1035 -1035 0 156 -1035 216 -1035 -1035 -88 -1035 0 123 -88 -154 73 56 70 -1035 122 -1035 -1035 -54 73 82 -30 -1035 41 82 -1035 -1035 211 -1035 -1035 46 -1035 140 44 -54 -159 56 -1035 146 -1035 56 12 -154 -1035 123 -1035 46 0 82 -1035 -154 -59 156 -1035 163 -1035 24 93 4 -59 -176 -1035 -54 -1035 169 -1035 -1035 -1035 194 -188 -154 41 104 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 13 E= 1.6e-001 0.000000 1.000000 0.000000 0.000000 0.384615 0.076923 0.076923 0.461538 0.000000 0.000000 0.230769 0.769231 0.000000 1.000000 0.000000 0.000000 0.153846 0.000000 0.230769 0.615385 0.153846 0.076923 0.384615 0.384615 0.461538 0.000000 0.538462 0.000000 0.000000 0.153846 0.384615 0.461538 0.230769 0.000000 0.307692 0.461538 0.000000 0.000000 1.000000 0.000000 0.000000 0.307692 0.000000 0.692308 0.384615 0.153846 0.076923 0.384615 0.000000 0.615385 0.000000 0.384615 0.307692 0.076923 0.000000 0.615385 0.000000 0.307692 0.230769 0.461538 0.000000 0.076923 0.153846 0.769231 0.000000 0.692308 0.000000 0.307692 0.538462 0.230769 0.153846 0.076923 0.000000 0.153846 0.000000 0.846154 0.000000 0.000000 0.000000 1.000000 0.076923 0.076923 0.307692 0.538462 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 regular expression -------------------------------------------------------------------------------- C[TA][TG]C[TG][GT][GA][TG][TGA]G[TC][AT][CT][TA][TCG]T[CT][AC]TT[TG] -------------------------------------------------------------------------------- Time 13.48 secs. ******************************************************************************** ******************************************************************************** MOTIF 2 MEME width = 20 sites = 18 llr = 220 E-value = 1.3e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif 2 Description -------------------------------------------------------------------------------- Simplified A 771871914931aa231972 pos.-specific C 326:24:71137::433::3 probability G ::3113:24:33::21611: matrix T :2:1:11:1:1:::13::26 bits 2.2 1.9 1.7 ** 1.5 * ** Relative 1.3 * * ** * Entropy 1.1 * * ** * *** * (17.6 bits) 0.9 * *** ** * *** ** 0.6 ***** ** * *** **** 0.4 ******** * *** **** 0.2 ******************** 0.0 -------------------- Multilevel AACAACACAAACAACAGAAT consensus C G CG GG GG ACC TC sequence C GT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------------------- 3389 384 7.85e-10 CCCGCTGAAG AACAACACGAACAAACGAAC CCGGTTGTTT 10768 475 1.44e-09 AACAGAAACA AACAACACAAGCAACTCAAC TCAGCC 10325 56 3.73e-09 GTTCCTTACG AAGAAGACGAAGAACTGAAT GAACTGCACT 11712 109 2.24e-07 AAGGACAAGG AACAAAAGGAGCAAGAGAAA TCAAACGTTA 7821 481 2.49e-07 TTCAACACAA CTCGACACAACCAACCCAAT 22758 365 2.49e-07 AAATGCTAGC AACACCACAACCAAACGGTT GATCATCAGA 36664 343 4.16e-07 GTTCAAGACG ACAAAGAGGAGCAACAGAAT GATGATGAAG 25170 290 1.06e-06 ACGAATCGAG AACAGCACAAGGAACCCAGC ACCCATCACC 7207 261 1.16e-06 TTCATATTCC AACACCAGTAAGAAACGATT GACTTACAAC 5970 227 1.26e-06 ACAGGAACAT ATCAAGACGAGAAACTGGAT GGAGGCAGCG 264152 481 2.07e-06 ACGGCCATCA ACGAAGAAAACGAAGAGAAT 22488 347 2.07e-06 CAACGACTCA AAGTCCACCAACAAGAGAAC GCAGAGACCA 11743 279 2.61e-06 TACGACAATA ACGAAGACGATCAATCAAAT CATTTGCAGG 4575 174 3.52e-06 ACGTTGACGA CACACTTCAAACAACTCATT AATAAGCTCT 1726 457 4.69e-06 AAACAGTTCT CACAAATCAACCAATTGATC TACTCATCGT 4713 101 6.16e-06 GTGTGTGAGT CAGGAGAGGAGCAACGAAAT TGAAGCAATG bd938 452 7.49e-06 CACCTTCCCT CACAACACCCCGAAAACAAA CACCTTCACC 5351 356 8.51e-06 GTCGCCGAGA ATGAATACTAACAAGAGAGA AAACTTGACG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 3389 7.8e-10 383_[+2]_97 10768 1.4e-09 474_[+2]_6 10325 3.7e-09 55_[+2]_425 11712 2.2e-07 108_[+2]_372 7821 2.5e-07 480_[+2] 22758 2.5e-07 364_[+2]_116 36664 4.2e-07 342_[+2]_138 25170 1.1e-06 289_[+2]_191 7207 1.2e-06 260_[+2]_220 5970 1.3e-06 226_[+2]_254 264152 2.1e-06 480_[+2] 22488 2.1e-06 346_[+2]_134 11743 2.6e-06 278_[+2]_202 4575 3.5e-06 173_[+2]_307 1726 4.7e-06 456_[+2]_24 4713 6.2e-06 100_[+2]_380 bd938 7.5e-06 451_[+2]_29 5351 8.5e-06 355_[+2]_125 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 2 width=20 seqs=18 3389 ( 384) AACAACACGAACAAACGAAC 1 10768 ( 475) AACAACACAAGCAACTCAAC 1 10325 ( 56) AAGAAGACGAAGAACTGAAT 1 11712 ( 109) AACAAAAGGAGCAAGAGAAA 1 7821 ( 481) CTCGACACAACCAACCCAAT 1 22758 ( 365) AACACCACAACCAAACGGTT 1 36664 ( 343) ACAAAGAGGAGCAACAGAAT 1 25170 ( 290) AACAGCACAAGGAACCCAGC 1 7207 ( 261) AACACCAGTAAGAAACGATT 1 5970 ( 227) ATCAAGACGAGAAACTGGAT 1 264152 ( 481) ACGAAGAAAACGAAGAGAAT 1 22488 ( 347) AAGTCCACCAACAAGAGAAC 1 11743 ( 279) ACGAAGACGATCAATCAAAT 1 4575 ( 174) CACACTTCAAACAACTCATT 1 1726 ( 457) CACAAATCAACCAATTGATC 1 4713 ( 101) CAGGAGAGGAGCAACGAAAT 1 bd938 ( 452) CACAACACCCCGAAAACAAA 1 5351 ( 356) ATGAATACTAACAAGAGAGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 20 n= 17316 bayes= 10.7571 E= 1.3e+000 135 31 -1081 -1081 123 -43 -1081 -65 -235 145 53 -1081 156 -1081 -106 -223 135 -1 -206 -1081 -135 99 53 -123 165 -1081 -1081 -123 -235 169 -6 -1081 46 -101 75 -123 174 -201 -1081 -1081 23 31 53 -223 -235 157 26 -1081 182 -1081 -1081 -1081 182 -1081 -1081 -1081 -35 99 -6 -123 23 57 -206 9 -135 31 140 -1081 165 -1081 -106 -1081 123 -1081 -106 -23 -76 31 -1081 109 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 20 nsites= 18 E= 1.3e+000 0.722222 0.277778 0.000000 0.000000 0.666667 0.166667 0.000000 0.166667 0.055556 0.611111 0.333333 0.000000 0.833333 0.000000 0.111111 0.055556 0.722222 0.222222 0.055556 0.000000 0.111111 0.444444 0.333333 0.111111 0.888889 0.000000 0.000000 0.111111 0.055556 0.722222 0.222222 0.000000 0.388889 0.111111 0.388889 0.111111 0.944444 0.055556 0.000000 0.000000 0.333333 0.277778 0.333333 0.055556 0.055556 0.666667 0.277778 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.222222 0.444444 0.222222 0.111111 0.333333 0.333333 0.055556 0.277778 0.111111 0.277778 0.611111 0.000000 0.888889 0.000000 0.111111 0.000000 0.666667 0.000000 0.111111 0.222222 0.166667 0.277778 0.000000 0.555556 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 regular expression -------------------------------------------------------------------------------- [AC]A[CG]A[AC][CG]A[CG][AG]A[AGC][CG]AA[CAG][ACT][GC]A[AT][TC] -------------------------------------------------------------------------------- Time 25.52 secs. ******************************************************************************** ******************************************************************************** MOTIF 3 MEME width = 20 sites = 6 llr = 111 E-value = 1.6e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif 3 Description -------------------------------------------------------------------------------- Simplified A ::2::::::2:33::::::: pos.-specific C :37:5a:aa:a725788288 probability G :2222:5::::::322:::: matrix T a5:83:5::8::522:2822 bits 2.2 * ** * 1.9 * * ** * 1.7 * * ** * 1.5 * * ** * ** ** Relative 1.3 * * * **** ***** Entropy 1.1 * * ******* ***** (26.6 bits) 0.9 * ** ******* ****** 0.6 ************ ******* 0.4 ******************** 0.2 ******************** 0.0 -------------------- Multilevel TTCTCCGCCTCCTCCCCTCC consensus C T T AAG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------------------- 5658 424 7.80e-13 GTGATTTTAG TCCTCCGCCTCCTCCCCTCC TCGAGGGTTT 11688 399 1.25e-09 ATTAAAAAGG TGCTCCTCCTCCTCGCCTTC ACGTCACATC 25170 13 3.34e-09 TCCAAACTTG TCATGCGCCTCACGCCCTCC ATTGTACATG 24576 373 4.80e-09 CTCTCTCACC TTCTTCTCCACCTCTGCTCC ACTGAGCCGT 36664 239 6.71e-09 CATCCCTTCT TTGTCCTCCTCCAGCCTTCT CGAGCACGTT 22758 137 7.64e-09 CAACATCGCA TTCGTCGCCTCAATCCCCCC CAACCCTGCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 5658 7.8e-13 423_[+3]_57 11688 1.3e-09 398_[+3]_82 25170 3.3e-09 12_[+3]_468 24576 4.8e-09 372_[+3]_108 36664 6.7e-09 238_[+3]_242 22758 7.6e-09 136_[+3]_344 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 3 width=20 seqs=6 5658 ( 424) TCCTCCGCCTCCTCCCCTCC 1 11688 ( 399) TGCTCCTCCTCCTCGCCTTC 1 25170 ( 13) TCATGCGCCTCACGCCCTCC 1 24576 ( 373) TTCTTCTCCACCTCTGCTCC 1 36664 ( 239) TTGTCCTCCTCCAGCCTTCT 1 22758 ( 137) TTCGTCGCCTCAATCCCCCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 20 n= 17316 bayes= 11.9419 E= 1.6e+001 -923 -923 -923 193 -923 57 -47 93 -76 157 -47 -923 -923 -923 -47 167 -923 116 -47 35 -923 216 -923 -923 -923 -923 111 93 -923 216 -923 -923 -923 216 -923 -923 -76 -923 -923 167 -923 216 -923 -923 23 157 -923 -923 23 -43 -923 93 -923 116 53 -65 -923 157 -47 -65 -923 189 -47 -923 -923 189 -923 -65 -923 -43 -923 167 -923 189 -923 -65 -923 189 -923 -65 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 20 nsites= 6 E= 1.6e+001 0.000000 0.000000 0.000000 1.000000 0.000000 0.333333 0.166667 0.500000 0.166667 0.666667 0.166667 0.000000 0.000000 0.000000 0.166667 0.833333 0.000000 0.500000 0.166667 0.333333 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.500000 0.500000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.166667 0.000000 0.000000 0.833333 0.000000 1.000000 0.000000 0.000000 0.333333 0.666667 0.000000 0.000000 0.333333 0.166667 0.000000 0.500000 0.000000 0.500000 0.333333 0.166667 0.000000 0.666667 0.166667 0.166667 0.000000 0.833333 0.166667 0.000000 0.000000 0.833333 0.000000 0.166667 0.000000 0.166667 0.000000 0.833333 0.000000 0.833333 0.000000 0.166667 0.000000 0.833333 0.000000 0.166667 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 regular expression -------------------------------------------------------------------------------- T[TC]CT[CT]C[GT]CCTC[CA][TA][CG]CCCTCC -------------------------------------------------------------------------------- Time 36.24 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 10325 3.06e-10 55_[+2(3.73e-09)]_263_\ [+1(1.12e-08)]_141 10501 7.10e-02 500 10768 8.38e-06 474_[+2(1.44e-09)]_6 11685 7.25e-01 500 11688 2.07e-05 58_[+3(4.20e-05)]_320_\ [+3(1.25e-09)]_82 11712 1.37e-06 108_[+2(2.24e-07)]_317_\ [+1(1.88e-06)]_34 11743 1.78e-02 278_[+2(2.61e-06)]_202 1726 3.94e-03 456_[+2(4.69e-06)]_24 1758 9.19e-01 500 2052 4.57e-03 79_[+1(3.44e-07)]_400 21416 5.35e-01 500 22488 1.58e-02 301_[+2(5.58e-05)]_25_\ [+2(2.07e-06)]_134 22758 4.98e-11 77_[+1(4.94e-07)]_38_[+3(7.64e-09)]_\ 208_[+2(2.49e-07)]_116 24576 1.08e-04 23_[+3(6.25e-05)]_329_\ [+3(4.80e-09)]_108 25170 1.04e-07 12_[+3(3.34e-09)]_257_\ [+2(1.06e-06)]_191 261610 2.40e-01 500 263128 2.65e-01 500 264152 1.51e-06 172_[+1(9.29e-08)]_287_\ [+2(2.07e-06)] 31358 1.50e-03 54_[+1(2.31e-07)]_425 3389 7.41e-06 383_[+2(7.85e-10)]_97 36664 4.72e-08 238_[+3(6.71e-09)]_84_\ [+2(4.16e-07)]_138 3979 2.75e-01 500 4575 2.47e-02 173_[+2(3.52e-06)]_307 4713 1.44e-07 100_[+2(6.16e-06)]_146_\ [+1(2.41e-09)]_213 4969 6.61e-02 441_[+2(5.14e-05)]_39 5089 1.58e-03 15_[+1(6.88e-07)]_464 5351 1.81e-05 355_[+2(8.51e-06)]_22_\ [+1(1.36e-07)]_82 5658 2.49e-11 423_[+3(7.80e-13)]_16_\ [+1(2.94e-07)]_20 5970 8.35e-03 226_[+2(1.26e-06)]_254 7200 7.50e-01 500 7207 9.23e-03 260_[+2(1.16e-06)]_220 7821 1.75e-09 99_[+3(7.30e-05)]_223_\ [+1(2.41e-09)]_117_[+2(2.49e-07)] 8375 1.40e-05 347_[+1(1.17e-09)]_132 9079 7.17e-01 500 bd1891 1.19e-03 [+1(1.49e-07)]_479 bd938 5.79e-02 451_[+2(7.49e-06)]_29 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because nmotifs = 3 reached. ******************************************************************************** CPU: seaotter.hsd1.wa.comcast.net ********************************************************************************