******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.10.0 (Release date: Wed May 21 10:35:36 2014 +1000) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net. This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme.nbcr.net. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= motifs/346/346.seqs.fa ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ 10151 1.0000 500 11409 1.0000 500 11628 1.0000 500 11655 1.0000 500 12147 1.0000 500 17815 1.0000 500 21504 1.0000 500 23350 1.0000 500 23364 1.0000 500 23858 1.0000 500 261804 1.0000 500 262815 1.0000 500 263504 1.0000 500 263580 1.0000 500 263793 1.0000 500 263838 1.0000 500 264386 1.0000 500 264882 1.0000 500 267977 1.0000 500 268403 1.0000 500 3241 1.0000 500 32486 1.0000 500 4633 1.0000 500 5672 1.0000 500 5845 1.0000 500 8236 1.0000 500 8244 1.0000 500 8249 1.0000 500 8779 1.0000 500 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme motifs/346/346.seqs.fa -oc motifs/346 -dna -minw 12 -maxw 21 -nmotifs 3 -maxsize 500000 model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 12 maxw= 21 minic= 0.00 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 29 wnsites= 0.8 theta: prob= 1 spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 14500 N= 29 strands: + sample: seed= 0 seqfrac= 1 Letter frequencies in dataset: A 0.272 C 0.228 G 0.237 T 0.262 Background letter frequencies (from dataset with add-one prior applied): A 0.272 C 0.228 G 0.237 T 0.262 ******************************************************************************** ******************************************************************************** MOTIF 1 MEME width = 15 sites = 29 llr = 257 E-value = 5.3e-004 ******************************************************************************** -------------------------------------------------------------------------------- Motif 1 Description -------------------------------------------------------------------------------- Simplified A ::2233::3121:12 pos.-specific C 11642::1:1:2::1 probability G :72:33192386:92 matrix T 92:3239:65:2a:5 bits 2.1 1.9 * 1.7 * ** 1.5 ** ** Relative 1.3 ** ** Entropy 1.1 * ** * ** (12.8 bits) 0.9 ** ** * ** 0.6 *** ** * ** 0.4 *** ********* 0.2 **** ********** 0.0 --------------- Multilevel TGCCAATGTTGGTGT consensus GTGT AG A sequence A G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------- 264386 284 1.62e-07 TCGCGGGCGG TGCAAGTGATGGTGT AACGAAGAGG 3241 94 9.21e-07 CTAGATCATC TGACAGTGAGGGTGT CTCTTGGACT 8236 265 1.26e-06 GTTCACAACT TGCCTGTGGTGGTGA ATAATACGGC 11655 450 1.46e-06 CCTCTACATT TGCAAATGTTGGTGC ACCATCGATT 10151 189 1.46e-06 TGCAACTTCA TGGCGTTGTCGGTGT TGTGCTTGTT 263793 139 2.84e-06 CCACTTCCTT TCCCAATGTTGGTGA GCTGCAATCC 263504 281 2.84e-06 CACGGTTCTT TGCTGTTGTAGGTGG TGTGTGAGGA 8244 143 3.69e-06 GCGCTGCTAG TGCTGGTGATGCTGG AGGCAAGGAG 5672 4 3.69e-06 CAA TGACGTTGATGTTGT CGCCAGCAAG 17815 245 3.69e-06 GCTGTTCCGC TGCTCATGGTGTTGT GCTTTATATT 8779 290 4.71e-06 TTGACGACGG TGGAGGTGGTGGTGA TGTTGGAAGC 268403 435 1.04e-05 TCAACAGATT TGCAAGTGATGGTAT GGAACAGCGA 32486 48 1.16e-05 CACTGAGAGA TGCCGATGTGCGTGA TCGTCGATTG 21504 343 1.29e-05 AGAATTGTCT TCCTCTTGTTGGTGG GAAGAGGAGT 11628 399 1.43e-05 TTAATTCAGG CGGCGGTGTTGTTGT TCCAACCAAC 262815 54 2.13e-05 GGATGAAGGA TTCCATGGTTGCTGT GTTGTCGTCG 263580 270 2.85e-05 TTCGAAGCAC TGCTGTTGTCACTGT TTGGCAAAAA 261804 175 3.12e-05 CATGGTGAAG TTGCAATGTGAGTGA GAAGAGTGGG 12147 119 3.42e-05 GAATGGGAAG TGCGTTTGTGGATGT CTTCATGGAT 23858 205 5.78e-05 GGGGAGCGTG TTCCTTTCTGGTTGT CAAGATCTGA 263838 446 9.37e-05 ATATCTACAA GGAAAGTGTGGGTGA ATTTATCGGT 23350 349 1.27e-04 CAGACGGAAA TGGTGATGAGAATGG GGACGAAGAA 11409 89 1.27e-04 CAATGACAAT TGATAATCTTGGTAT CGACATTTTT 23364 68 1.37e-04 CTTGTAAATA AGCTAATGAAGGTGA ATGCAACTAC 264882 121 1.69e-04 GGAAACCAAG TTGACTGGGGGGTGT ACACGCGGCA 8249 52 2.23e-04 TGCTGTGTAT TGCCCTGGGAGCTGG TAATCTCATT 267977 411 2.38e-04 CTTTCATTAC TTGCTATCATGATGT CAATGACATC 5845 241 3.27e-04 CGAATTTGTG CGATTGTGTGATTGT GCGATTTTTG 4633 100 7.60e-04 AAGTTTGTCT TACACATGTGACTGC TTATCTCAAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 264386 1.6e-07 283_[+1]_202 3241 9.2e-07 93_[+1]_392 8236 1.3e-06 264_[+1]_221 11655 1.5e-06 449_[+1]_36 10151 1.5e-06 188_[+1]_297 263793 2.8e-06 138_[+1]_347 263504 2.8e-06 280_[+1]_205 8244 3.7e-06 142_[+1]_343 5672 3.7e-06 3_[+1]_482 17815 3.7e-06 244_[+1]_241 8779 4.7e-06 289_[+1]_196 268403 1e-05 434_[+1]_51 32486 1.2e-05 47_[+1]_438 21504 1.3e-05 342_[+1]_143 11628 1.4e-05 398_[+1]_87 262815 2.1e-05 53_[+1]_432 263580 2.8e-05 269_[+1]_216 261804 3.1e-05 174_[+1]_311 12147 3.4e-05 118_[+1]_367 23858 5.8e-05 204_[+1]_281 263838 9.4e-05 445_[+1]_40 23350 0.00013 348_[+1]_137 11409 0.00013 88_[+1]_397 23364 0.00014 67_[+1]_418 264882 0.00017 120_[+1]_365 8249 0.00022 51_[+1]_434 267977 0.00024 410_[+1]_75 5845 0.00033 240_[+1]_245 4633 0.00076 99_[+1]_386 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 1 width=15 seqs=29 264386 ( 284) TGCAAGTGATGGTGT 1 3241 ( 94) TGACAGTGAGGGTGT 1 8236 ( 265) TGCCTGTGGTGGTGA 1 11655 ( 450) TGCAAATGTTGGTGC 1 10151 ( 189) TGGCGTTGTCGGTGT 1 263793 ( 139) TCCCAATGTTGGTGA 1 263504 ( 281) TGCTGTTGTAGGTGG 1 8244 ( 143) TGCTGGTGATGCTGG 1 5672 ( 4) TGACGTTGATGTTGT 1 17815 ( 245) TGCTCATGGTGTTGT 1 8779 ( 290) TGGAGGTGGTGGTGA 1 268403 ( 435) TGCAAGTGATGGTAT 1 32486 ( 48) TGCCGATGTGCGTGA 1 21504 ( 343) TCCTCTTGTTGGTGG 1 11628 ( 399) CGGCGGTGTTGTTGT 1 262815 ( 54) TTCCATGGTTGCTGT 1 263580 ( 270) TGCTGTTGTCACTGT 1 261804 ( 175) TTGCAATGTGAGTGA 1 12147 ( 119) TGCGTTTGTGGATGT 1 23858 ( 205) TTCCTTTCTGGTTGT 1 263838 ( 446) GGAAAGTGTGGGTGA 1 23350 ( 349) TGGTGATGAGAATGG 1 11409 ( 89) TGATAATCTTGGTAT 1 23364 ( 68) AGCTAATGAAGGTGA 1 264882 ( 121) TTGACTGGGGGGTGT 1 8249 ( 52) TGCCCTGGGAGCTGG 1 267977 ( 411) TTGCTATCATGATGT 1 5845 ( 241) CGATTGTGTGATTGT 1 4633 ( 100) TACACATGTGACTGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 14094 bayes= 8.92184 E= 5.3e-004 -298 -172 -278 172 -298 -172 161 -60 -66 136 2 -1150 -17 86 -278 24 34 -40 39 -60 34 -1150 39 40 -1150 -1150 -120 177 -1150 -114 192 -1150 2 -1150 -46 107 -140 -172 54 88 -66 -272 174 -1150 -140 -40 122 -60 -1150 -1150 -1150 193 -198 -1150 197 -1150 -17 -172 -46 98 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 29 E= 5.3e-004 0.034483 0.068966 0.034483 0.862069 0.034483 0.068966 0.724138 0.172414 0.172414 0.586207 0.241379 0.000000 0.241379 0.413793 0.034483 0.310345 0.344828 0.172414 0.310345 0.172414 0.344828 0.000000 0.310345 0.344828 0.000000 0.000000 0.103448 0.896552 0.000000 0.103448 0.896552 0.000000 0.275862 0.000000 0.172414 0.551724 0.103448 0.068966 0.344828 0.482759 0.172414 0.034483 0.793103 0.000000 0.103448 0.172414 0.551724 0.172414 0.000000 0.000000 0.000000 1.000000 0.068966 0.000000 0.931034 0.000000 0.241379 0.068966 0.172414 0.517241 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 regular expression -------------------------------------------------------------------------------- TG[CG][CTA][AG][ATG]TG[TA][TG]GGTG[TA] -------------------------------------------------------------------------------- Time 6.34 secs. ******************************************************************************** ******************************************************************************** MOTIF 2 MEME width = 21 sites = 6 llr = 115 E-value = 4.7e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif 2 Description -------------------------------------------------------------------------------- Simplified A ::87:8::8:22a3:8837:: pos.-specific C a2228:5a:788:2a:2322a probability G :7:2:2::2::::::2::::: matrix T :2::2:5::3:::5:::328: bits 2.1 * * * * 1.9 * * * * * 1.7 * * * * * 1.5 * * * *** * * Relative 1.3 * * ** ** *** *** ** Entropy 1.1 * * ********* *** ** (27.6 bits) 0.9 *** ********* *** ** 0.6 ************* *** *** 0.4 ********************* 0.2 ********************* 0.0 --------------------- Multilevel CGAACACCACCCATCAAAATC consensus T T A C sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------------- 23364 444 4.39e-12 TCAAATCACA CGAACATCACCCACCAACATC ACTTCGCCAA 262815 241 4.83e-11 ACCATCATCG CGAATACCACCCAACAATATC AAGGGCATTG 263793 96 8.45e-10 TTGAAATGTA CGAACATCGTCAATCAATATC TTGCCATTCT 264386 173 9.20e-10 ACCTCACATC CGAGCACCACACATCGACATC GAACAACATG 261804 55 7.56e-09 AGCCTCCTGT CTCCCATCATCCAACAAACTC ATGTAAGACA 267977 219 8.89e-09 AATCATCGAG CCAACGCCACCCATCACATCC GATGGTGTCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 23364 4.4e-12 443_[+2]_36 262815 4.8e-11 240_[+2]_239 263793 8.5e-10 95_[+2]_384 264386 9.2e-10 172_[+2]_307 261804 7.6e-09 54_[+2]_425 267977 8.9e-09 218_[+2]_261 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 2 width=21 seqs=6 23364 ( 444) CGAACATCACCCACCAACATC 1 262815 ( 241) CGAATACCACCCAACAATATC 1 263793 ( 96) CGAACATCGTCAATCAATATC 1 264386 ( 173) CGAGCACCACACATCGACATC 1 261804 ( 55) CTCCCATCATCCAACAAACTC 1 267977 ( 219) CCAACGCCACCCATCACATCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 13920 bayes= 10.8381 E= 4.7e+000 -923 213 -923 -923 -923 -45 149 -65 161 -45 -923 -923 129 -45 -51 -923 -923 187 -923 -65 161 -923 -51 -923 -923 113 -923 93 -923 213 -923 -923 161 -923 -51 -923 -923 155 -923 35 -71 187 -923 -923 -71 187 -923 -923 187 -923 -923 -923 29 -45 -923 93 -923 213 -923 -923 161 -923 -51 -923 161 -45 -923 -923 29 55 -923 35 129 -45 -923 -65 -923 -45 -923 167 -923 213 -923 -923 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 6 E= 4.7e+000 0.000000 1.000000 0.000000 0.000000 0.000000 0.166667 0.666667 0.166667 0.833333 0.166667 0.000000 0.000000 0.666667 0.166667 0.166667 0.000000 0.000000 0.833333 0.000000 0.166667 0.833333 0.000000 0.166667 0.000000 0.000000 0.500000 0.000000 0.500000 0.000000 1.000000 0.000000 0.000000 0.833333 0.000000 0.166667 0.000000 0.000000 0.666667 0.000000 0.333333 0.166667 0.833333 0.000000 0.000000 0.166667 0.833333 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.333333 0.166667 0.000000 0.500000 0.000000 1.000000 0.000000 0.000000 0.833333 0.000000 0.166667 0.000000 0.833333 0.166667 0.000000 0.000000 0.333333 0.333333 0.000000 0.333333 0.666667 0.166667 0.000000 0.166667 0.000000 0.166667 0.000000 0.833333 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 regular expression -------------------------------------------------------------------------------- CGAACA[CT]CA[CT]CCA[TA]CAA[ACT]ATC -------------------------------------------------------------------------------- Time 13.34 secs. ******************************************************************************** ******************************************************************************** MOTIF 3 MEME width = 20 sites = 7 llr = 119 E-value = 8.0e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif 3 Description -------------------------------------------------------------------------------- Simplified A 3:1:4:::::::11::1:4: pos.-specific C :73117::9::9::64::1: probability G ::6613a::9719:164a:a matrix T 73:33::a113::93:4:4: bits 2.1 * * * 1.9 ** * * 1.7 ** * * 1.5 **** ** * * Relative 1.3 * ***** *** * * Entropy 1.1 ** ********* * * * (24.4 bits) 0.9 ** ********* * * * 0.6 **** ************* * 0.4 **** *************** 0.2 ******************** 0.0 -------------------- Multilevel TCGGACGTCGGCGTCGGGAG consensus ATCTTG T TCT T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------------------- 267977 79 1.18e-10 GGAGGGCTTG TCGTCCGTCGGCGTCGGGAG TCAACGCACT 8236 1 5.84e-09 . TTGGGCGTCGTCGTCCTGCG GGAAAGACCA 264386 32 7.57e-09 TTGACTGACG TCGGTGGTCGGGGTGGGGTG TCATTGAGTT 23364 195 9.92e-09 CCCTCCTCCC TCACACGTCTGCGTCGGGTG ACGCAGAGAG 268403 163 1.08e-08 ACTCGCCCCG ACCGACGTCGGCGACCAGAG TTGTTATCTT 262815 368 2.63e-08 CACCTTGTTC ACCTTCGTCGGCATTCTGAG TTGCAACATT 8779 156 2.81e-08 GCTGTCGGTG TTGGAGGTTGTCGTTGTGTG ACGGTGCAGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 267977 1.2e-10 78_[+3]_402 8236 5.8e-09 [+3]_480 264386 7.6e-09 31_[+3]_449 23364 9.9e-09 194_[+3]_286 268403 1.1e-08 162_[+3]_318 262815 2.6e-08 367_[+3]_113 8779 2.8e-08 155_[+3]_325 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 3 width=20 seqs=7 267977 ( 79) TCGTCCGTCGGCGTCGGGAG 1 8236 ( 1) TTGGGCGTCGTCGTCCTGCG 1 264386 ( 32) TCGGTGGTCGGGGTGGGGTG 1 23364 ( 195) TCACACGTCTGCGTCGGGTG 1 268403 ( 163) ACCGACGTCGGCGACCAGAG 1 262815 ( 368) ACCTTCGTCGGCATTCTGAG 1 8779 ( 156) TTGGAGGTTGTCGTTGTGTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 20 n= 13949 bayes= 10.8036 E= 8.0e+001 7 -945 -945 145 -945 165 -945 12 -93 32 127 -945 -945 -67 127 12 65 -67 -73 12 -945 165 27 -945 -945 -945 207 -945 -945 -945 -945 193 -945 191 -945 -87 -945 -945 185 -87 -945 -945 159 12 -945 191 -73 -945 -93 -945 185 -945 -93 -945 -945 171 -945 132 -73 12 -945 91 127 -945 -93 -945 85 71 -945 -945 207 -945 65 -67 -945 71 -945 -945 207 -945 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 20 nsites= 7 E= 8.0e+001 0.285714 0.000000 0.000000 0.714286 0.000000 0.714286 0.000000 0.285714 0.142857 0.285714 0.571429 0.000000 0.000000 0.142857 0.571429 0.285714 0.428571 0.142857 0.142857 0.285714 0.000000 0.714286 0.285714 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.857143 0.000000 0.142857 0.000000 0.000000 0.857143 0.142857 0.000000 0.000000 0.714286 0.285714 0.000000 0.857143 0.142857 0.000000 0.142857 0.000000 0.857143 0.000000 0.142857 0.000000 0.000000 0.857143 0.000000 0.571429 0.142857 0.285714 0.000000 0.428571 0.571429 0.000000 0.142857 0.000000 0.428571 0.428571 0.000000 0.000000 1.000000 0.000000 0.428571 0.142857 0.000000 0.428571 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 regular expression -------------------------------------------------------------------------------- [TA][CT][GC][GT][AT][CG]GTCG[GT]CGT[CT][GC][GT]G[AT]G -------------------------------------------------------------------------------- Time 19.90 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 10151 2.72e-03 188_[+1(1.46e-06)]_297 11409 2.97e-01 500 11628 7.17e-03 398_[+1(1.43e-05)]_87 11655 2.10e-03 272_[+2(9.97e-05)]_156_\ [+1(1.46e-06)]_36 12147 5.08e-02 118_[+1(3.42e-05)]_367 17815 1.42e-02 244_[+1(3.69e-06)]_241 21504 1.78e-02 42_[+1(6.82e-05)]_285_\ [+1(1.29e-05)]_143 23350 2.03e-01 500 23364 4.18e-13 194_[+3(9.92e-09)]_229_\ [+2(4.39e-12)]_36 23858 1.60e-01 204_[+1(5.78e-05)]_281 261804 6.86e-06 54_[+2(7.56e-09)]_99_[+1(3.12e-05)]_\ 311 262815 1.79e-12 53_[+1(2.13e-05)]_172_\ [+2(4.83e-11)]_106_[+3(2.63e-08)]_113 263504 8.85e-03 144_[+1(5.31e-05)]_121_\ [+1(2.84e-06)]_205 263580 2.26e-03 111_[+2(6.38e-05)]_137_\ [+1(2.85e-05)]_152_[+2(5.88e-05)]_43 263793 1.14e-07 95_[+2(8.45e-10)]_22_[+1(2.84e-06)]_\ 347 263838 1.68e-01 445_[+1(9.37e-05)]_40 264386 8.95e-14 31_[+3(7.57e-09)]_121_\ [+2(9.20e-10)]_90_[+1(1.62e-07)]_202 264882 8.96e-02 500 267977 1.38e-11 78_[+3(1.18e-10)]_120_\ [+2(8.89e-09)]_195_[+2(7.47e-05)]_45 268403 4.67e-07 162_[+3(1.08e-08)]_252_\ [+1(1.04e-05)]_51 3241 8.94e-03 93_[+1(9.21e-07)]_392 32486 5.13e-03 47_[+1(1.16e-05)]_438 4633 6.33e-01 500 5672 2.79e-02 3_[+1(3.69e-06)]_482 5845 1.98e-01 500 8236 3.47e-07 [+3(5.84e-09)]_244_[+1(1.26e-06)]_\ 221 8244 1.87e-02 142_[+1(3.69e-06)]_343 8249 3.61e-01 500 8779 4.29e-06 155_[+3(2.81e-08)]_114_\ [+1(4.71e-06)]_196 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because nmotifs = 3 reached. ******************************************************************************** CPU: seaotter.hsd1.wa.comcast.net ********************************************************************************