******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.10.0 (Release date: Wed May 21 10:35:36 2014 +1000) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net. This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme.nbcr.net. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= motifs/370/370.seqs.fa ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ 10172 1.0000 500 11364 1.0000 500 11392 1.0000 500 22336 1.0000 500 22428 1.0000 500 22486 1.0000 500 22772 1.0000 500 25649 1.0000 500 25790 1.0000 500 25874 1.0000 500 267933 1.0000 500 270007 1.0000 500 3688 1.0000 500 38555 1.0000 500 4518 1.0000 500 4878 1.0000 500 6639 1.0000 500 6680 1.0000 500 6956 1.0000 500 7110 1.0000 500 7213 1.0000 500 9617 1.0000 500 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme motifs/370/370.seqs.fa -oc motifs/370 -dna -minw 12 -maxw 21 -nmotifs 3 -maxsize 500000 model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 12 maxw= 21 minic= 0.00 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 22 wnsites= 0.8 theta: prob= 1 spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 11000 N= 22 strands: + sample: seed= 0 seqfrac= 1 Letter frequencies in dataset: A 0.266 C 0.236 G 0.233 T 0.265 Background letter frequencies (from dataset with add-one prior applied): A 0.266 C 0.236 G 0.233 T 0.265 ******************************************************************************** ******************************************************************************** MOTIF 1 MEME width = 21 sites = 19 llr = 219 E-value = 5.5e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif 1 Description -------------------------------------------------------------------------------- Simplified A ::4::::11::::2:::1::1 pos.-specific C 84:7218:3252622412431 probability G :54:14:24:41212135275 matrix T 2123752828182576625:3 bits 2.1 1.9 1.7 1.5 Relative 1.3 * * * * * Entropy 1.0 * * ** * * * (16.6 bits) 0.8 * ** ** * ** *** * 0.6 ** ***** **** *** ** 0.4 ******** **** *** *** 0.2 ********************* 0.0 --------------------- Multilevel CGACTTCTGTCTCTTTTGTGG consensus TCGTCGT C G TA CGCCCT sequence T T C T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------------- 6639 133 1.62e-11 TTATTTGGCG CCACTGCTGTCTCTTCTGCGG TTGATTTGTC 11392 17 3.80e-08 TCAACGGTGC CGTCTTCGGTGTTTTCTGTGG AGCAGTAGAC 7213 433 4.38e-08 GCCGCACACT CCACTCCTCTCTCCTTTCTCG TCCCTCTCGC 3688 383 5.03e-08 AAACCCCACT CCACTTCTTTCTCCTCGATGG CATGGCAAAG 25874 275 2.61e-07 CTGACAAGCG CCTCTTCTGTCTGCTTTTTGC CTCTGCTTCT 4878 304 8.62e-07 GGCACTTGCT TGGCGGCTCTCTCTCTTTTGT GAGATGGCCG 9617 82 1.05e-06 TCGGCCTTGG CGGCTGCTACTTCTTCGGCGG AGACTGTGGC 38555 401 1.55e-06 TGAGTACTCA TGGCTGCTGTGTGTTGTCTGT AACTTTATTC 6956 371 1.87e-06 GACGACGTGA CCGTTGCTTTTTCAGCTGTCG ATTCGTTGGG 267933 183 1.87e-06 CCTGATACAC CGATCTCTGTGTCTGTGGCGA GTTGCGCCAG 6680 181 2.04e-06 GATTGAAGCG TCTCTGCTCCCCCTTTTCCCG CCAACATTCA 7110 232 2.24e-06 TATCGTAGCA CGACCTTTGTCTTCTCCGTGG ATTTGTTGTT 22428 103 5.65e-06 CCTTGGACCT CGACTTCGTCGTCACTTGCGC CGTCGATGGG 22336 365 7.13e-06 AACAAGACTT CTTCCTTTCTCCCTTCTCCGT CCTACACCAA 4518 359 8.92e-06 CCATTGTATT CTGTTTCGTTGTTTTTGTTCG TCCGTCGGTG 270007 116 1.11e-05 GCTGCTGCAG CGACGGCTGTCGCAGTTGGCT CTCTTGCTCA 25790 380 1.27e-05 CAGTAAACGT CCGTTTCTGTCCGTCTGTGCT TCTTTCAGCG 11364 141 2.02e-05 TTGTGCACTG CGACTCTACTGTTGTTTGCGG GATTTATCGG 22486 419 3.09e-05 CAAAGACTCA TCGTCGTTCTGTCATTGAGGT TGGCTCCATG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 6639 1.6e-11 132_[+1]_347 11392 3.8e-08 16_[+1]_463 7213 4.4e-08 432_[+1]_47 3688 5e-08 382_[+1]_97 25874 2.6e-07 274_[+1]_205 4878 8.6e-07 303_[+1]_176 9617 1.1e-06 81_[+1]_398 38555 1.5e-06 400_[+1]_79 6956 1.9e-06 370_[+1]_109 267933 1.9e-06 182_[+1]_297 6680 2e-06 180_[+1]_299 7110 2.2e-06 231_[+1]_248 22428 5.7e-06 102_[+1]_377 22336 7.1e-06 364_[+1]_115 4518 8.9e-06 358_[+1]_121 270007 1.1e-05 115_[+1]_364 25790 1.3e-05 379_[+1]_100 11364 2e-05 140_[+1]_339 22486 3.1e-05 418_[+1]_61 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 1 width=21 seqs=19 6639 ( 133) CCACTGCTGTCTCTTCTGCGG 1 11392 ( 17) CGTCTTCGGTGTTTTCTGTGG 1 7213 ( 433) CCACTCCTCTCTCCTTTCTCG 1 3688 ( 383) CCACTTCTTTCTCCTCGATGG 1 25874 ( 275) CCTCTTCTGTCTGCTTTTTGC 1 4878 ( 304) TGGCGGCTCTCTCTCTTTTGT 1 9617 ( 82) CGGCTGCTACTTCTTCGGCGG 1 38555 ( 401) TGGCTGCTGTGTGTTGTCTGT 1 6956 ( 371) CCGTTGCTTTTTCAGCTGTCG 1 267933 ( 183) CGATCTCTGTGTCTGTGGCGA 1 6680 ( 181) TCTCTGCTCCCCCTTTTCCCG 1 7110 ( 232) CGACCTTTGTCTTCTCCGTGG 1 22428 ( 103) CGACTTCGTCGTCACTTGCGC 1 22336 ( 365) CTTCCTTTCTCCCTTCTCCGT 1 4518 ( 359) CTGTTTCGTTGTTTTTGTTCG 1 270007 ( 116) CGACGGCTGTCGCAGTTGGCT 1 25790 ( 380) CCGTTTCTGTCCGTCTGTGCT 1 11364 ( 141) CGACTCTACTGTTGTTTGCGG 1 22486 ( 419) TCGTCGTTCTGTCATTGAGGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 10560 bayes= 9.31094 E= 5.5e-001 -1089 174 -1089 -33 -1089 84 102 -133 66 -1089 66 -33 -1089 164 -1089 -1 -1089 -16 -115 137 -1089 -116 85 84 -1089 174 -1089 -33 -233 -1089 -56 157 -233 42 85 -33 -1089 -58 -1089 167 -1089 116 66 -133 -1089 -58 -215 157 -1089 142 -56 -33 -34 -16 -215 99 -1089 -58 -56 137 -1089 65 -215 113 -1089 -216 44 125 -134 -16 102 -33 -1089 65 -56 84 -1089 42 155 -1089 -233 -116 117 25 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 19 E= 5.5e-001 0.000000 0.789474 0.000000 0.210526 0.000000 0.421053 0.473684 0.105263 0.421053 0.000000 0.368421 0.210526 0.000000 0.736842 0.000000 0.263158 0.000000 0.210526 0.105263 0.684211 0.000000 0.105263 0.421053 0.473684 0.000000 0.789474 0.000000 0.210526 0.052632 0.000000 0.157895 0.789474 0.052632 0.315789 0.421053 0.210526 0.000000 0.157895 0.000000 0.842105 0.000000 0.526316 0.368421 0.105263 0.000000 0.157895 0.052632 0.789474 0.000000 0.631579 0.157895 0.210526 0.210526 0.210526 0.052632 0.526316 0.000000 0.157895 0.157895 0.684211 0.000000 0.368421 0.052632 0.578947 0.000000 0.052632 0.315789 0.631579 0.105263 0.210526 0.473684 0.210526 0.000000 0.368421 0.157895 0.473684 0.000000 0.315789 0.684211 0.000000 0.052632 0.105263 0.526316 0.315789 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 regular expression -------------------------------------------------------------------------------- [CT][GC][AGT][CT][TC][TG][CT]T[GCT]T[CG]T[CT][TAC]T[TC][TG][GCT][TC][GC][GT] -------------------------------------------------------------------------------- Time 5.03 secs. ******************************************************************************** ******************************************************************************** MOTIF 2 MEME width = 15 sites = 8 llr = 113 E-value = 1.0e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif 2 Description -------------------------------------------------------------------------------- Simplified A ::3:1:::3::1:1: pos.-specific C :134:4::1:1:::: probability G :9::95:a33:99:a matrix T a:56:1a:489:19: bits 2.1 * * 1.9 * ** * 1.7 * ** * 1.5 ** * ** ***** Relative 1.3 ** * ** ***** Entropy 1.0 ** ** ** ****** (20.3 bits) 0.8 ** ** ** ****** 0.6 ** ***** ****** 0.4 ******** ****** 0.2 ******** ****** 0.0 --------------- Multilevel TGTTGGTGTTTGGTG consensus AC C AG sequence C G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------- 4878 13 9.07e-10 AGATGATTGC TGTTGGTGTTTGGTG GTTGCTTGTT 7110 259 7.50e-08 GTGGATTTGT TGTTGCTGCGTGGTG TTGCAGGCTG 11364 207 1.06e-07 GAGCATGCGC TGTTGCTGGTTGGAG ACACGTTGGT 3688 3 2.07e-07 AG TGCTGGTGATTAGTG ATTTTAAGAG 22428 187 2.22e-07 GTTTGGTTGA TCATGGTGATTGGTG TTTATAGGGA 6639 176 3.08e-07 CTGCCATTGT TGACGCTGTTTGTTG TTTTCACTAC 4518 112 3.25e-07 CCGGCGACAT TGTCGGTGGGCGGTG CCGAGGCCGT 9617 134 6.85e-07 TTTCGTCGTC TGCCATTGTTTGGTG CTGTGAGTTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 4878 9.1e-10 12_[+2]_473 7110 7.5e-08 258_[+2]_227 11364 1.1e-07 206_[+2]_279 3688 2.1e-07 2_[+2]_483 22428 2.2e-07 186_[+2]_299 6639 3.1e-07 175_[+2]_310 4518 3.2e-07 111_[+2]_374 9617 6.9e-07 133_[+2]_352 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 2 width=15 seqs=8 4878 ( 13) TGTTGGTGTTTGGTG 1 7110 ( 259) TGTTGCTGCGTGGTG 1 11364 ( 207) TGTTGCTGGTTGGAG 1 3688 ( 3) TGCTGGTGATTAGTG 1 22428 ( 187) TCATGGTGATTGGTG 1 6639 ( 176) TGACGCTGTTTGTTG 1 4518 ( 112) TGTCGGTGGGCGGTG 1 9617 ( 134) TGCCATTGTTTGGTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 10692 bayes= 10.3832 E= 1.0e+000 -965 -965 -965 191 -965 -91 191 -965 -9 9 -965 91 -965 67 -965 124 -109 -965 191 -965 -965 67 110 -108 -965 -965 -965 191 -965 -965 210 -965 -9 -91 10 50 -965 -965 10 150 -965 -91 -965 172 -109 -965 191 -965 -965 -965 191 -108 -109 -965 -965 172 -965 -965 210 -965 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 8 E= 1.0e+000 0.000000 0.000000 0.000000 1.000000 0.000000 0.125000 0.875000 0.000000 0.250000 0.250000 0.000000 0.500000 0.000000 0.375000 0.000000 0.625000 0.125000 0.000000 0.875000 0.000000 0.000000 0.375000 0.500000 0.125000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.250000 0.125000 0.250000 0.375000 0.000000 0.000000 0.250000 0.750000 0.000000 0.125000 0.000000 0.875000 0.125000 0.000000 0.875000 0.000000 0.000000 0.000000 0.875000 0.125000 0.125000 0.000000 0.000000 0.875000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 regular expression -------------------------------------------------------------------------------- TG[TAC][TC]G[GC]TG[TAG][TG]TGGTG -------------------------------------------------------------------------------- Time 9.73 secs. ******************************************************************************** ******************************************************************************** MOTIF 3 MEME width = 21 sites = 10 llr = 150 E-value = 7.0e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif 3 Description -------------------------------------------------------------------------------- Simplified A :a712219529:9:29:5425 pos.-specific C a:252:9:54:71a2:82:6: probability G ::::14:::1:3::3111621 matrix T ::1454:1:31:::3:12::4 bits 2.1 * * 1.9 ** * 1.7 ** * * 1.5 ** ** * ** * Relative 1.3 ** ** **** * Entropy 1.0 ** *** **** ** * (21.6 bits) 0.8 *** *** **** ** * 0.6 **** *** **** ** *** 0.4 **** **** **** ** *** 0.2 ************** ****** 0.0 --------------------- Multilevel CAACTGCAACACACGACAGCA consensus CTAT CT G T CAAT sequence CA A A T G C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------------- 22428 462 2.09e-10 GGCAGTCATA CAACTACACTACACCACAGCA CCTCCTTCCT 3688 470 6.20e-10 AAAATACTGC CACTTTCAACACACGACAACA TACACCAATC 9617 474 2.44e-09 CGACGCTAAA CAACAACACAACACTACAGCT AACACA 6639 458 3.69e-08 GCCGTCCTCT CAATAGCAATACACTAGTGCA ACAGCACGTC 6680 467 6.89e-08 CGATTGAGAG CAATTGCAACACACTATCAAT TTTTATTGTC 7110 139 8.15e-08 ATGATCTATC CAACCTCTCGACACCACCGCT GCCGACGACC 25790 153 1.53e-07 CGCCGCCATC CAAATGCAACAGACGGCAAGA GCAAGGAATT 10172 207 1.77e-07 CAATGACGAC CAATTGAAACAGACGACGGCG AGCTGCATAT 22336 341 3.95e-07 GTTGTCCAAC CATCCTCACTTCACAACAAGA CTTCTTCCTT 22486 133 1.17e-06 CCATCGCCGT CACCGTCACAAGCCAACTGAT ATCTACCCCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 22428 2.1e-10 461_[+3]_18 3688 6.2e-10 469_[+3]_10 9617 2.4e-09 473_[+3]_6 6639 3.7e-08 457_[+3]_22 6680 6.9e-08 466_[+3]_13 7110 8.2e-08 138_[+3]_341 25790 1.5e-07 152_[+3]_327 10172 1.8e-07 206_[+3]_273 22336 3.9e-07 340_[+3]_139 22486 1.2e-06 132_[+3]_347 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 3 width=21 seqs=10 22428 ( 462) CAACTACACTACACCACAGCA 1 3688 ( 470) CACTTTCAACACACGACAACA 1 9617 ( 474) CAACAACACAACACTACAGCT 1 6639 ( 458) CAATAGCAATACACTAGTGCA 1 6680 ( 467) CAATTGCAACACACTATCAAT 1 7110 ( 139) CAACCTCTCGACACCACCGCT 1 25790 ( 153) CAAATGCAACAGACGGCAAGA 1 10172 ( 207) CAATTGAAACAGACGACGGCG 1 22336 ( 341) CATCCTCACTTCACAACAAGA 1 22486 ( 133) CACCGTCACAAGCCAACTGAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 10560 bayes= 10.2948 E= 7.0e+000 -997 208 -997 -997 191 -997 -997 -997 140 -24 -997 -141 -141 109 -997 59 -41 -24 -122 91 -41 -997 78 59 -141 193 -997 -997 176 -997 -997 -141 91 109 -997 -997 -41 76 -122 18 176 -997 -997 -141 -997 157 36 -997 176 -123 -997 -997 -997 208 -997 -997 -41 -24 36 18 176 -997 -122 -997 -997 176 -122 -141 91 -24 -122 -41 59 -997 136 -997 -41 135 -22 -997 91 -997 -122 59 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 10 E= 7.0e+000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.700000 0.200000 0.000000 0.100000 0.100000 0.500000 0.000000 0.400000 0.200000 0.200000 0.100000 0.500000 0.200000 0.000000 0.400000 0.400000 0.100000 0.900000 0.000000 0.000000 0.900000 0.000000 0.000000 0.100000 0.500000 0.500000 0.000000 0.000000 0.200000 0.400000 0.100000 0.300000 0.900000 0.000000 0.000000 0.100000 0.000000 0.700000 0.300000 0.000000 0.900000 0.100000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.200000 0.200000 0.300000 0.300000 0.900000 0.000000 0.100000 0.000000 0.000000 0.800000 0.100000 0.100000 0.500000 0.200000 0.100000 0.200000 0.400000 0.000000 0.600000 0.000000 0.200000 0.600000 0.200000 0.000000 0.500000 0.000000 0.100000 0.400000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 regular expression -------------------------------------------------------------------------------- CA[AC][CT][TAC][GTA]CA[AC][CTA]A[CG]AC[GTAC]AC[ACT][GA][CAG][AT] -------------------------------------------------------------------------------- Time 13.62 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 10172 1.11e-03 206_[+3(1.77e-07)]_273 11364 3.39e-05 19_[+2(8.11e-05)]_106_\ [+1(2.02e-05)]_45_[+2(1.06e-07)]_279 11392 4.64e-05 16_[+1(3.80e-08)]_410_\ [+2(9.37e-05)]_5_[+2(6.50e-05)]_18 22336 3.15e-05 340_[+3(3.95e-07)]_3_[+1(7.13e-06)]_\ 115 22428 1.52e-11 102_[+1(5.65e-06)]_63_\ [+2(2.22e-07)]_260_[+3(2.09e-10)]_18 22486 2.61e-04 132_[+3(1.17e-06)]_265_\ [+1(3.09e-05)]_61 22772 8.08e-01 500 25649 3.83e-01 500 25790 3.45e-05 152_[+3(1.53e-07)]_206_\ [+1(1.27e-05)]_100 25874 1.97e-03 274_[+1(2.61e-07)]_205 267933 6.05e-03 182_[+1(1.87e-06)]_297 270007 2.11e-02 115_[+1(1.11e-05)]_364 3688 4.65e-13 2_[+2(2.07e-07)]_365_[+1(5.03e-08)]_\ 66_[+3(6.20e-10)]_10 38555 3.54e-04 400_[+1(1.55e-06)]_79 4518 3.00e-05 111_[+2(3.25e-07)]_232_\ [+1(8.92e-06)]_121 4878 5.00e-08 12_[+2(9.07e-10)]_34_[+1(9.44e-05)]_\ 221_[+1(8.62e-07)]_176 6639 1.61e-14 132_[+1(1.62e-11)]_22_\ [+2(3.08e-07)]_267_[+3(3.69e-08)]_22 6680 1.69e-06 180_[+1(2.04e-06)]_265_\ [+3(6.89e-08)]_13 6956 2.11e-03 26_[+1(2.92e-05)]_323_\ [+1(1.87e-06)]_109 7110 6.10e-10 138_[+3(8.15e-08)]_72_\ [+1(2.24e-06)]_6_[+2(7.50e-08)]_227 7213 7.68e-04 432_[+1(4.38e-08)]_47 9617 9.03e-11 81_[+1(1.05e-06)]_6_[+1(9.03e-05)]_\ 4_[+2(6.85e-07)]_325_[+3(2.44e-09)]_6 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because nmotifs = 3 reached. ******************************************************************************** CPU: seaotter.hsd1.wa.comcast.net ********************************************************************************