******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.10.0 (Release date: Wed May 21 10:35:36 2014 +1000) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net. This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme.nbcr.net. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= motifs/420/420.seqs.fa ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ 10249 1.0000 500 10374 1.0000 500 10699 1.0000 500 1341 1.0000 500 17600 1.0000 500 20086 1.0000 500 24733 1.0000 500 25389 1.0000 500 25870 1.0000 500 268788 1.0000 500 3047 1.0000 500 33312 1.0000 500 38428 1.0000 500 4535 1.0000 500 5090 1.0000 500 9746 1.0000 500 bd1120 1.0000 500 bd636 1.0000 500 bd764 1.0000 500 bd848 1.0000 500 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme motifs/420/420.seqs.fa -oc motifs/420 -dna -minw 12 -maxw 21 -nmotifs 3 -maxsize 500000 model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 12 maxw= 21 minic= 0.00 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 20 wnsites= 0.8 theta: prob= 1 spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 10000 N= 20 strands: + sample: seed= 0 seqfrac= 1 Letter frequencies in dataset: A 0.281 C 0.241 G 0.232 T 0.247 Background letter frequencies (from dataset with add-one prior applied): A 0.280 C 0.241 G 0.232 T 0.247 ******************************************************************************** ******************************************************************************** MOTIF 1 MEME width = 21 sites = 13 llr = 187 E-value = 9.0e-006 ******************************************************************************** -------------------------------------------------------------------------------- Motif 1 Description -------------------------------------------------------------------------------- Simplified A 7:58179:22:5369227529 pos.-specific C :a:292:93673621783221 probability G ::41:1:13:3:12:1:::2: matrix T 3:1:::1:22:2::::::34: bits 2.1 * 1.9 * 1.7 * * * 1.5 * * ** * * * Relative 1.3 * * ** * * * * Entropy 1.1 ** * ** * * ** * (20.7 bits) 0.8 ** ***** * * **** * 0.6 ******** ** ****** * 0.4 ******** ********** * 0.2 ******** ********** * 0.0 --------------------- Multilevel ACAACAACCCCACAACCAATA consensus T G C GTGCAG A CTA sequence A G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------------- bd1120 462 5.10e-12 CAACACTGAC ACAACAACCCCCCAACCAATA ACACGCAACA bd764 476 2.13e-10 TTCTCACTCC ACAACAACGCCACAACCCTAA CACC bd636 462 8.84e-10 CAACACTGAC ACAACAACCCCCGAACCAATA ACACGCAACA bd848 407 1.89e-08 TTCTCACTCC ACAAAAACGCCACAACCCTAA CACCATGAAC 268788 374 6.42e-08 AGCCAGTGAA ACGACGACGCGAAGACCAACA ACAGACGGAG 38428 166 7.73e-08 TCGGCCCAAA ACGACAACAACAAGAACAAGA CCAGCACTCC 10699 172 9.26e-08 GGGTACTTCC ACACCAACACGACGAACATGA CGCCTCGCCT 5090 81 2.92e-07 GGGGCCACGG TCAACAACTCCACACGCACTA ACCGCAACAG 4535 464 5.95e-07 TTCAATCCAT ACGACAACTCCTCAACACTGC CGAGGGCAAA 3047 237 6.36e-07 TGAACAATAC TCTACCACAACCAAAACAATA GGAAACAGCA 25870 375 8.24e-07 TGTGTTTCGG ACACCCACCTGCACACCCACA TGCCTACCCT 9746 466 1.05e-06 TTACATCTTC TCGACCTCCTCTCCACCACTA TCACCTTCGC 10374 255 1.97e-06 TCTCACACGG TCGGCAAGGTGACAACAAAAA AGTGCACAGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- bd1120 5.1e-12 461_[+1]_18 bd764 2.1e-10 475_[+1]_4 bd636 8.8e-10 461_[+1]_18 bd848 1.9e-08 406_[+1]_73 268788 6.4e-08 373_[+1]_106 38428 7.7e-08 165_[+1]_314 10699 9.3e-08 171_[+1]_308 5090 2.9e-07 80_[+1]_399 4535 6e-07 463_[+1]_16 3047 6.4e-07 236_[+1]_243 25870 8.2e-07 374_[+1]_105 9746 1.1e-06 465_[+1]_14 10374 2e-06 254_[+1]_225 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 1 width=21 seqs=13 bd1120 ( 462) ACAACAACCCCCCAACCAATA 1 bd764 ( 476) ACAACAACGCCACAACCCTAA 1 bd636 ( 462) ACAACAACCCCCGAACCAATA 1 bd848 ( 407) ACAAAAACGCCACAACCCTAA 1 268788 ( 374) ACGACGACGCGAAGACCAACA 1 38428 ( 166) ACGACAACAACAAGAACAAGA 1 10699 ( 172) ACACCAACACGACGAACATGA 1 5090 ( 81) TCAACAACTCCACACGCACTA 1 4535 ( 464) ACGACAACTCCTCAACACTGC 1 3047 ( 237) TCTACCACAACCAAAACAATA 1 25870 ( 375) ACACCCACCTGCACACCCACA 1 9746 ( 466) TCGACCTCCTCTCCACCACTA 1 10374 ( 255) TCGGCAAGGTGACAACAAAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 9600 bayes= 10.0575 E= 9.0e-006 130 -1035 -1035 32 -1035 205 -1035 -1035 94 -1035 73 -168 145 -65 -159 -1035 -186 194 -1035 -1035 130 -6 -159 -1035 172 -1035 -1035 -168 -1035 194 -159 -1035 -28 35 41 -68 -87 135 -1035 -10 -1035 152 41 -1035 94 35 -1035 -68 13 135 -159 -1035 113 -65 -1 -1035 172 -164 -1035 -1035 -28 152 -159 -1035 -87 181 -1035 -1035 130 35 -1035 -1035 94 -65 -1035 32 -28 -65 -1 64 172 -164 -1035 -1035 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 13 E= 9.0e-006 0.692308 0.000000 0.000000 0.307692 0.000000 1.000000 0.000000 0.000000 0.538462 0.000000 0.384615 0.076923 0.769231 0.153846 0.076923 0.000000 0.076923 0.923077 0.000000 0.000000 0.692308 0.230769 0.076923 0.000000 0.923077 0.000000 0.000000 0.076923 0.000000 0.923077 0.076923 0.000000 0.230769 0.307692 0.307692 0.153846 0.153846 0.615385 0.000000 0.230769 0.000000 0.692308 0.307692 0.000000 0.538462 0.307692 0.000000 0.153846 0.307692 0.615385 0.076923 0.000000 0.615385 0.153846 0.230769 0.000000 0.923077 0.076923 0.000000 0.000000 0.230769 0.692308 0.076923 0.000000 0.153846 0.846154 0.000000 0.000000 0.692308 0.307692 0.000000 0.000000 0.538462 0.153846 0.000000 0.307692 0.230769 0.153846 0.230769 0.384615 0.923077 0.076923 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 regular expression -------------------------------------------------------------------------------- [AT]C[AG]AC[AC]AC[CGA][CT][CG][AC][CA][AG]A[CA]C[AC][AT][TAG]A -------------------------------------------------------------------------------- Time 3.60 secs. ******************************************************************************** ******************************************************************************** MOTIF 2 MEME width = 21 sites = 14 llr = 190 E-value = 7.7e-004 ******************************************************************************** -------------------------------------------------------------------------------- Motif 2 Description -------------------------------------------------------------------------------- Simplified A 14::11::3:1:1::1:411: pos.-specific C 23:2:::::14:1331:1:1: probability G 61461838:419117163198 matrix T 13628172754186:7428:2 bits 2.1 1.9 1.7 * 1.5 * Relative 1.3 ** * * ** Entropy 1.1 * ***** * * * *** (19.6 bits) 0.8 * ***** ** * * *** 0.6 * ******** ****** *** 0.4 * ******** ****** *** 0.2 ********************* 0.0 --------------------- Multilevel GATGTGTGTTTGTTGTGATGG consensus CCGC GTAGC CC TG T sequence T T T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------------- 10249 196 2.53e-09 CATTGTCTCT GGTGTGTGTGTGTTGTGTTGT GTTGTGTTGG bd1120 199 4.25e-09 GTAATGGATG GTTGGGTGATTGTTCTTATGG TGATGGTGTT bd848 6 7.87e-09 AAATG CATTTGTGTTCGTCGCGATGG AACACAATTG bd764 77 7.87e-09 GTGCTAAATG CATTTGTGTTCGTCGCGATGG AACACAATTG 1341 160 6.17e-08 AGGACAGTGT GCTGTGTGTTCGTCGATATCG ATAGTTGTTT 20086 476 7.51e-08 GGTCGGTGCC GCTGTGGGTTTGCCGTTTTGT CGTC bd636 64 1.59e-07 CGCTTCTTGA GTGCGTTGTTCGTTGTTCTGG TATGCTCTCG 4535 77 1.90e-07 TGGACGAGGC GAGGTGTGAGAGTTGGGGGGG GGGGGAGAAA 17600 3 2.93e-07 TT GCTTTGGGATTGTTCTTGGGT GTTGCTGGTG 9746 55 1.04e-06 GGCTGCGATG GAGCTGTTACTGAGGTGATGG GCGACGCTGA 3047 39 1.49e-06 GGCTTCAGAT TCTGTGTTTGAGTTCTGTTAG AGAAAAATCG 268788 96 1.60e-06 CCCATTGCTG CTGCTGGTTCGGTGGTGGTGG TCGTCGACGA 5090 273 2.57e-06 TTGAGAGCGG ATGGTTTGTGTGGTGTGGAGG GTTGATCGGC 10374 399 2.75e-06 GGGTTTGAAA GATGAAGGTGCTTTCTTATGG TCCTCGCCTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 10249 2.5e-09 195_[+2]_284 bd1120 4.2e-09 198_[+2]_281 bd848 7.9e-09 5_[+2]_474 bd764 7.9e-09 76_[+2]_403 1341 6.2e-08 159_[+2]_320 20086 7.5e-08 475_[+2]_4 bd636 1.6e-07 63_[+2]_416 4535 1.9e-07 76_[+2]_403 17600 2.9e-07 2_[+2]_477 9746 1e-06 54_[+2]_425 3047 1.5e-06 38_[+2]_441 268788 1.6e-06 95_[+2]_384 5090 2.6e-06 272_[+2]_207 10374 2.7e-06 398_[+2]_81 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 2 width=21 seqs=14 10249 ( 196) GGTGTGTGTGTGTTGTGTTGT 1 bd1120 ( 199) GTTGGGTGATTGTTCTTATGG 1 bd848 ( 6) CATTTGTGTTCGTCGCGATGG 1 bd764 ( 77) CATTTGTGTTCGTCGCGATGG 1 1341 ( 160) GCTGTGTGTTCGTCGATATCG 1 20086 ( 476) GCTGTGGGTTTGCCGTTTTGT 1 bd636 ( 64) GTGCGTTGTTCGTTGTTCTGG 1 4535 ( 77) GAGGTGTGAGAGTTGGGGGGG 1 17600 ( 3) GCTTTGGGATTGTTCTTGGGT 1 9746 ( 55) GAGCTGTTACTGAGGTGATGG 1 3047 ( 39) TCTGTGTTTGAGTTCTGTTAG 1 268788 ( 96) CTGCTGGTTCGGTGGTGGTGG 1 5090 ( 273) ATGGTTTGTGTGGTGTGGAGG 1 10374 ( 399) GATGAAGGTGCTTTCTTATGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 9600 bayes= 9.263 E= 7.7e-004 -197 -17 147 -179 35 25 -170 21 -1045 -1045 62 138 -1045 -17 130 -20 -197 -1045 -70 167 -197 -1045 176 -79 -1045 -1045 30 153 -1045 -1045 176 -20 3 -1045 -1045 153 -1045 -75 62 102 -97 57 -170 80 -1045 -1045 200 -179 -197 -175 -170 167 -1045 25 -70 121 -1045 25 162 -1045 -197 -75 -170 153 -1045 -1045 130 80 61 -175 30 -20 -197 -1045 -70 167 -197 -175 188 -1045 -1045 -1045 176 -20 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 14 E= 7.7e-004 0.071429 0.214286 0.642857 0.071429 0.357143 0.285714 0.071429 0.285714 0.000000 0.000000 0.357143 0.642857 0.000000 0.214286 0.571429 0.214286 0.071429 0.000000 0.142857 0.785714 0.071429 0.000000 0.785714 0.142857 0.000000 0.000000 0.285714 0.714286 0.000000 0.000000 0.785714 0.214286 0.285714 0.000000 0.000000 0.714286 0.000000 0.142857 0.357143 0.500000 0.142857 0.357143 0.071429 0.428571 0.000000 0.000000 0.928571 0.071429 0.071429 0.071429 0.071429 0.785714 0.000000 0.285714 0.142857 0.571429 0.000000 0.285714 0.714286 0.000000 0.071429 0.142857 0.071429 0.714286 0.000000 0.000000 0.571429 0.428571 0.428571 0.071429 0.285714 0.214286 0.071429 0.000000 0.142857 0.785714 0.071429 0.071429 0.857143 0.000000 0.000000 0.000000 0.785714 0.214286 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 regular expression -------------------------------------------------------------------------------- [GC][ACT][TG][GCT]TG[TG][GT][TA][TG][TC]GT[TC][GC]T[GT][AGT]TG[GT] -------------------------------------------------------------------------------- Time 7.08 secs. ******************************************************************************** ******************************************************************************** MOTIF 3 MEME width = 21 sites = 11 llr = 159 E-value = 5.3e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif 3 Description -------------------------------------------------------------------------------- Simplified A :7:::::::2:2132:7:4:3 pos.-specific C 9:a:27419362545a:a157 probability G 11:15:13::121:1:::15: matrix T :2:933561535443:3:51: bits 2.1 * * * 1.9 * * * 1.7 * ** * * * 1.5 * ** * * * Relative 1.3 * ** * * * * Entropy 1.1 * ** * * *** * (20.8 bits) 0.8 **** * ** * *** * 0.6 *********** *** ** 0.4 *********** ** *** ** 0.2 ********************* 0.0 --------------------- Multilevel CACTGCTTCTCTCCCCACTCC consensus TTCG CT TTT T AGA sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------------- bd848 386 7.88e-11 AGTGAGTTGA CACTGCTTCCCTTCTCACTCC ACAAAAACGC bd764 455 7.88e-11 AGTGAGTTGA CACTGCTTCCCTTCTCACTCC ACAACAACGC 4535 358 2.61e-10 TCAAGCAATC CACTTCTTCTTTCTCCACAGC TAACCTCTCC 10699 132 1.65e-07 AGGATTCCTT GACTTCCTCTCATTTCACTCA GGGGACAATG bd1120 13 2.27e-07 GCCTCCCCAC CACGGCGGCCCCCACCACTGC GGCCGCGACG 20086 317 2.45e-07 ACCAACCAAT CACTCCCCCTCCTCCCTCCGC CCGTGCCCTT 9746 158 3.80e-07 GCTTGGCCAT CGCTGCTGCATTCCCCTCTTC CGTCGTCCTC 25870 244 4.07e-07 CAATACAGCA CACTGCTGCTGTAAACACACA AACTAACCTA 5090 440 6.06e-07 ATTGATCTCA CTCTGTTTTTCACAGCACAGC ACACAAGCTT 33312 454 6.46e-07 AGCTGGCTTC CTCTCTCTCTTGCTACACAGA TATTACCCTT 10374 354 7.77e-07 TTATTTGGGA CACTTTCTCACGGTCCTCGCC AGCTCTGGAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- bd848 7.9e-11 385_[+3]_94 bd764 7.9e-11 454_[+3]_25 4535 2.6e-10 357_[+3]_122 10699 1.7e-07 131_[+3]_348 bd1120 2.3e-07 12_[+3]_467 20086 2.4e-07 316_[+3]_163 9746 3.8e-07 157_[+3]_322 25870 4.1e-07 243_[+3]_236 5090 6.1e-07 439_[+3]_40 33312 6.5e-07 453_[+3]_26 10374 7.8e-07 353_[+3]_126 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 3 width=21 seqs=11 bd848 ( 386) CACTGCTTCCCTTCTCACTCC 1 bd764 ( 455) CACTGCTTCCCTTCTCACTCC 1 4535 ( 358) CACTTCTTCTTTCTCCACAGC 1 10699 ( 132) GACTTCCTCTCATTTCACTCA 1 bd1120 ( 13) CACGGCGGCCCCCACCACTGC 1 20086 ( 317) CACTCCCCCTCCTCCCTCCGC 1 9746 ( 158) CGCTGCTGCATTCCCCTCTTC 1 25870 ( 244) CACTGCTGCTGTAAACACACA 1 5090 ( 440) CTCTGTTTTTCACAGCACAGC 1 33312 ( 454) CTCTCTCTCTTGCTACACAGA 1 10374 ( 354) CACTTTCTCACGGTCCTCGCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 9600 bayes= 9.31967 E= 5.3e-001 -1010 192 -135 -1010 137 -1010 -135 -44 -1010 205 -1010 -1010 -1010 -1010 -135 188 -1010 -40 123 14 -1010 159 -1010 14 -1010 59 -135 114 -1010 -140 23 137 -1010 192 -1010 -144 -62 18 -1010 114 -1010 140 -135 14 -62 -40 -35 88 -162 92 -135 56 -4 59 -1010 56 -62 92 -135 14 -1010 205 -1010 -1010 137 -1010 -1010 14 -1010 205 -1010 -1010 37 -140 -135 88 -1010 92 97 -144 -4 159 -1010 -1010 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 11 E= 5.3e-001 0.000000 0.909091 0.090909 0.000000 0.727273 0.000000 0.090909 0.181818 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.090909 0.909091 0.000000 0.181818 0.545455 0.272727 0.000000 0.727273 0.000000 0.272727 0.000000 0.363636 0.090909 0.545455 0.000000 0.090909 0.272727 0.636364 0.000000 0.909091 0.000000 0.090909 0.181818 0.272727 0.000000 0.545455 0.000000 0.636364 0.090909 0.272727 0.181818 0.181818 0.181818 0.454545 0.090909 0.454545 0.090909 0.363636 0.272727 0.363636 0.000000 0.363636 0.181818 0.454545 0.090909 0.272727 0.000000 1.000000 0.000000 0.000000 0.727273 0.000000 0.000000 0.272727 0.000000 1.000000 0.000000 0.000000 0.363636 0.090909 0.090909 0.454545 0.000000 0.454545 0.454545 0.090909 0.272727 0.727273 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 regular expression -------------------------------------------------------------------------------- CACT[GT][CT][TC][TG]C[TC][CT]T[CT][CTA][CT]C[AT]C[TA][CG][CA] -------------------------------------------------------------------------------- Time 10.53 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 10249 8.96e-05 195_[+2(2.53e-09)]_284 10374 1.17e-07 254_[+1(1.97e-06)]_78_\ [+3(7.77e-07)]_24_[+2(2.75e-06)]_81 10699 7.10e-07 131_[+3(1.65e-07)]_19_\ [+1(9.26e-08)]_5_[+3(3.57e-05)]_282 1341 1.54e-03 159_[+2(6.17e-08)]_320 17600 2.83e-03 2_[+2(2.93e-07)]_477 20086 5.40e-08 87_[+1(9.95e-05)]_208_\ [+3(2.45e-07)]_106_[+2(3.68e-05)]_11_[+2(7.51e-08)]_4 24733 7.38e-01 500 25389 7.51e-01 500 25870 8.40e-06 243_[+3(4.07e-07)]_110_\ [+1(8.24e-07)]_105 268788 4.02e-06 95_[+2(1.60e-06)]_257_\ [+1(6.42e-08)]_106 3047 1.73e-05 38_[+2(1.49e-06)]_177_\ [+1(6.36e-07)]_243 33312 2.76e-03 76_[+3(3.44e-05)]_356_\ [+3(6.46e-07)]_26 38428 4.41e-04 165_[+1(7.73e-08)]_314 4535 1.93e-12 76_[+2(1.90e-07)]_260_\ [+3(2.61e-10)]_85_[+1(5.95e-07)]_16 5090 1.54e-08 80_[+1(2.92e-07)]_28_[+3(8.59e-05)]_\ 122_[+2(2.57e-06)]_146_[+3(6.06e-07)]_40 9746 1.42e-08 54_[+2(1.04e-06)]_82_[+3(3.80e-07)]_\ 287_[+1(1.05e-06)]_14 bd1120 5.04e-16 12_[+3(2.27e-07)]_165_\ [+2(4.25e-09)]_242_[+1(5.10e-12)]_18 bd636 2.04e-09 63_[+2(1.59e-07)]_377_\ [+1(8.84e-10)]_18 bd764 1.59e-17 76_[+2(7.87e-09)]_357_\ [+3(7.88e-11)]_[+1(2.13e-10)]_4 bd848 1.15e-15 5_[+2(7.87e-09)]_359_[+3(7.88e-11)]_\ [+1(1.89e-08)]_73 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because nmotifs = 3 reached. ******************************************************************************** CPU: seaotter.hsd1.wa.comcast.net ********************************************************************************