******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.10.0 (Release date: Wed May 21 10:35:36 2014 +1000) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net. This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme.nbcr.net. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= motifs/438/438.seqs.fa ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ 10047 1.0000 500 10224 1.0000 500 10603 1.0000 500 1311 1.0000 500 2092 1.0000 500 21668 1.0000 500 22782 1.0000 500 2295 1.0000 500 23271 1.0000 500 23481 1.0000 500 23556 1.0000 500 23731 1.0000 500 23804 1.0000 500 23939 1.0000 500 24137 1.0000 500 24853 1.0000 500 2505 1.0000 500 25062 1.0000 500 25072 1.0000 500 25350 1.0000 500 25375 1.0000 500 267952 1.0000 500 3037 1.0000 500 34043 1.0000 500 36013 1.0000 500 4104 1.0000 500 41328 1.0000 500 6734 1.0000 500 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme motifs/438/438.seqs.fa -oc motifs/438 -dna -minw 12 -maxw 21 -nmotifs 3 -maxsize 500000 model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 12 maxw= 21 minic= 0.00 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 28 wnsites= 0.8 theta: prob= 1 spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 14000 N= 28 strands: + sample: seed= 0 seqfrac= 1 Letter frequencies in dataset: A 0.268 C 0.236 G 0.227 T 0.269 Background letter frequencies (from dataset with add-one prior applied): A 0.268 C 0.236 G 0.227 T 0.269 ******************************************************************************** ******************************************************************************** MOTIF 1 MEME width = 21 sites = 11 llr = 171 E-value = 2.4e-003 ******************************************************************************** -------------------------------------------------------------------------------- Motif 1 Description -------------------------------------------------------------------------------- Simplified A 138:934a:5736::215:27 pos.-specific C :11::2::::11:33:2::52 probability G 911a156:a424:468:5231 matrix T :5:::::::1:3441:7:8:: bits 2.1 * * 1.9 * ** 1.7 * * ** 1.5 * ** ** * Relative 1.3 * ** ** * * Entropy 1.1 * *** *** * ** (22.4 bits) 0.9 * *** *** * * ***** * 0.6 * ********* * ******* 0.4 * ********* ********* 0.2 ********************* 0.0 --------------------- Multilevel GTAGAGGAGAAGAGGGTATCA consensus A AA G ATTC G G sequence T C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------------- 22782 28 3.36e-10 TCACTTGACC GTGGAGGAGAAGACGGTATCA TTGGTCGCCG 23804 302 4.32e-09 ACGGTAGTCA GTAGAGGAGAATATTGTATCC ACAAGTTCGA 23731 117 4.85e-09 GTATTGGTGT GTAGAGGAGAGTAGGGTGTGG TATTGTGCGG 6734 99 9.34e-09 GTTGATGAAT GAAGAAGAGAAAAGGGCAGCA GCCAAGTTGT 10047 157 1.15e-08 GCAATGAGCA GTAGAAAAGAACATCGTGTGA CACGACGACC 25375 189 1.27e-08 TGATGCGCCC GTAGAGAAGGATTCGGTGTAC CAGCGATGTT 23271 163 2.72e-08 TGATGATGAC GCAGAGAAGTAGAGGGCATCA ATCCCTCTAC 21668 130 6.88e-08 CCGAAGAAAC GTCGACGAGGAAATCGTAGCA AAGCAGTGGC 34043 197 1.65e-07 TTCATTCTTC GGAGAGAAGGCATTGATGTCA TCGGATGTTC 2295 317 2.59e-07 GGTGTGGATG GAAGGAGAGAGGTCGATGTGA AGGTATGCCA 2092 416 5.99e-07 GTAATATCGC AAAGACGAGGAGTGCGAATAA CTTCTCGTAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 22782 3.4e-10 27_[+1]_452 23804 4.3e-09 301_[+1]_178 23731 4.8e-09 116_[+1]_363 6734 9.3e-09 98_[+1]_381 10047 1.1e-08 156_[+1]_323 25375 1.3e-08 188_[+1]_291 23271 2.7e-08 162_[+1]_317 21668 6.9e-08 129_[+1]_350 34043 1.6e-07 196_[+1]_283 2295 2.6e-07 316_[+1]_163 2092 6e-07 415_[+1]_64 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 1 width=21 seqs=11 22782 ( 28) GTGGAGGAGAAGACGGTATCA 1 23804 ( 302) GTAGAGGAGAATATTGTATCC 1 23731 ( 117) GTAGAGGAGAGTAGGGTGTGG 1 6734 ( 99) GAAGAAGAGAAAAGGGCAGCA 1 10047 ( 157) GTAGAAAAGAACATCGTGTGA 1 25375 ( 189) GTAGAGAAGGATTCGGTGTAC 1 23271 ( 163) GCAGAGAAGTAGAGGGCATCA 1 21668 ( 130) GTCGACGAGGAAATCGTAGCA 1 34043 ( 197) GGAGAGAAGGCATTGATGTCA 1 2295 ( 317) GAAGGAGAGAGGTCGATGTGA 1 2092 ( 416) AAAGACGAGGAGTGCGAATAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 13440 bayes= 10.609 E= 2.4e-003 -156 -1010 200 -1010 3 -138 -132 102 161 -138 -132 -1010 -1010 -1010 214 -1010 176 -1010 -132 -1010 3 -38 126 -1010 44 -1010 149 -1010 190 -1010 -1010 -1010 -1010 -1010 214 -1010 102 -1010 68 -156 144 -138 -32 -1010 3 -138 68 2 125 -1010 -1010 44 -1010 21 68 44 -1010 21 149 -156 -56 -1010 185 -1010 -156 -38 -1010 144 102 -1010 100 -1010 -1010 -1010 -32 161 -56 121 26 -1010 144 -38 -132 -1010 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 11 E= 2.4e-003 0.090909 0.000000 0.909091 0.000000 0.272727 0.090909 0.090909 0.545455 0.818182 0.090909 0.090909 0.000000 0.000000 0.000000 1.000000 0.000000 0.909091 0.000000 0.090909 0.000000 0.272727 0.181818 0.545455 0.000000 0.363636 0.000000 0.636364 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.545455 0.000000 0.363636 0.090909 0.727273 0.090909 0.181818 0.000000 0.272727 0.090909 0.363636 0.272727 0.636364 0.000000 0.000000 0.363636 0.000000 0.272727 0.363636 0.363636 0.000000 0.272727 0.636364 0.090909 0.181818 0.000000 0.818182 0.000000 0.090909 0.181818 0.000000 0.727273 0.545455 0.000000 0.454545 0.000000 0.000000 0.000000 0.181818 0.818182 0.181818 0.545455 0.272727 0.000000 0.727273 0.181818 0.090909 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 regular expression -------------------------------------------------------------------------------- G[TA]AGA[GA][GA]AG[AG]A[GAT][AT][GTC][GC]GT[AG]T[CG]A -------------------------------------------------------------------------------- Time 6.91 secs. ******************************************************************************** ******************************************************************************** MOTIF 2 MEME width = 12 sites = 18 llr = 178 E-value = 1.5e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif 2 Description -------------------------------------------------------------------------------- Simplified A 3:1:41:12::: pos.-specific C 2:132::2:::: probability G 5::713127::a matrix T :a8:36961aa: bits 2.1 * 1.9 * *** 1.7 * *** 1.5 * * *** Relative 1.3 * * * *** Entropy 1.1 *** * *** (14.3 bits) 0.9 *** * **** 0.6 **** ** **** 0.4 **** ******* 0.2 **** ******* 0.0 ------------ Multilevel GTTGATTTGTTG consensus A CTG GA sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------ 6734 81 2.09e-07 ATTTCGTATT GTTGCTTTGTTG ATGAATGAAG 2092 124 1.05e-06 AGAACCATCA GTTGGTTTGTTG ACTATTGCCT 1311 31 1.25e-06 CATGATGGGG ATTGAGTTGTTG CTCCTTCCAG 267952 348 1.47e-06 ATTATACATC ATTCATTTGTTG TAGCCTGTTC 23804 443 2.06e-06 GAACACAACA GTTGCTTCGTTG CTTCACTTCT 4104 379 2.98e-06 ATGTTTGTGT ATTGTTTGGTTG TTGCCATTGT 23556 105 2.98e-06 GCTGTCCATT GTTGAATTGTTG TCTTTCGTGT 22782 117 4.67e-06 TTTGTTTTTT CTTGTGTTGTTG GTTGTGTTTT 24853 270 7.89e-06 CTGTTGAGCT CTTCAGTTGTTG TTTCAGCCGT 25072 311 1.25e-05 CTTCCACTGC CTTCGTTTGTTG TTGCTGTCGG 34043 413 1.43e-05 GTCAAGGTTA GTCCTTTTGTTG CATTTATGGT 25350 327 3.12e-05 TGCGATGTGC ATTGAGTGTTTG TATCCAGAAT 23481 87 3.62e-05 ATTGCTGTTG GTTCTGTCATTG ACAGTGGACT 10224 363 3.88e-05 CTCCCGCCAA GTTGTATGATTG TTATTCATTA 23731 101 4.41e-05 GGTTGCCATG GTTGCTGTATTG GTGTGTAGAG 25062 246 5.58e-05 TCATGTAAGT GTTGCTTATTTG CCGAGTGTTG 3037 462 5.93e-05 GTAGAATACA ATCGATTCATTG GCTTCTATAA 24137 259 5.93e-05 GTCTGGTGCA ATACATTGGTTG ATGCCGTCGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 6734 2.1e-07 80_[+2]_408 2092 1e-06 123_[+2]_365 1311 1.2e-06 30_[+2]_458 267952 1.5e-06 347_[+2]_141 23804 2.1e-06 442_[+2]_46 4104 3e-06 378_[+2]_110 23556 3e-06 104_[+2]_384 22782 4.7e-06 116_[+2]_372 24853 7.9e-06 269_[+2]_219 25072 1.2e-05 310_[+2]_178 34043 1.4e-05 412_[+2]_76 25350 3.1e-05 326_[+2]_162 23481 3.6e-05 86_[+2]_402 10224 3.9e-05 362_[+2]_126 23731 4.4e-05 100_[+2]_388 25062 5.6e-05 245_[+2]_243 3037 5.9e-05 461_[+2]_27 24137 5.9e-05 258_[+2]_230 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 2 width=12 seqs=18 6734 ( 81) GTTGCTTTGTTG 1 2092 ( 124) GTTGGTTTGTTG 1 1311 ( 31) ATTGAGTTGTTG 1 267952 ( 348) ATTCATTTGTTG 1 23804 ( 443) GTTGCTTCGTTG 1 4104 ( 379) ATTGTTTGGTTG 1 23556 ( 105) GTTGAATTGTTG 1 22782 ( 117) CTTGTGTTGTTG 1 24853 ( 270) CTTCAGTTGTTG 1 25072 ( 311) CTTCGTTTGTTG 1 34043 ( 413) GTCCTTTTGTTG 1 25350 ( 327) ATTGAGTGTTTG 1 23481 ( 87) GTTCTGTCATTG 1 10224 ( 363) GTTGTATGATTG 1 23731 ( 101) GTTGCTGTATTG 1 25062 ( 246) GTTGCTTATTTG 1 3037 ( 462) ATCGATTCATTG 1 24137 ( 259) ATACATTGGTTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 13692 bayes= 10.4181 E= 1.5e+000 31 -50 114 -1081 -1081 -1081 -1081 190 -227 -109 -1081 163 -1081 50 155 -1081 54 -9 -103 5 -127 -1081 29 118 -1081 -1081 -203 181 -227 -50 -3 105 -27 -1081 155 -127 -1081 -1081 -1081 190 -1081 -1081 -1081 190 -1081 -1081 214 -1081 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 18 E= 1.5e+000 0.333333 0.166667 0.500000 0.000000 0.000000 0.000000 0.000000 1.000000 0.055556 0.111111 0.000000 0.833333 0.000000 0.333333 0.666667 0.000000 0.388889 0.222222 0.111111 0.277778 0.111111 0.000000 0.277778 0.611111 0.000000 0.000000 0.055556 0.944444 0.055556 0.166667 0.222222 0.555556 0.222222 0.000000 0.666667 0.111111 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 regular expression -------------------------------------------------------------------------------- [GA]TT[GC][ATC][TG]T[TG][GA]TTG -------------------------------------------------------------------------------- Time 13.59 secs. ******************************************************************************** ******************************************************************************** MOTIF 3 MEME width = 12 sites = 18 llr = 178 E-value = 3.6e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif 3 Description -------------------------------------------------------------------------------- Simplified A 21533::a7191 pos.-specific C 782272a:19:9 probability G :12::2::2:1: matrix T 1:15:6:::1:: bits 2.1 * 1.9 ** 1.7 ** * 1.5 ** *** Relative 1.3 * ** *** Entropy 1.1 * * ** *** (14.3 bits) 0.9 ** * ****** 0.6 ** ******** 0.4 ** ********* 0.2 ************ 0.0 ------------ Multilevel CCATCTCAACAC consensus CAAC G sequence G G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------ 6734 488 2.95e-07 CACATATCTA CCATCGCAACAC C 23939 300 1.43e-06 ACAGACCAGC CCATAGCAACAC AACAGAACAC 25062 103 1.69e-06 GCAAGCACCG CCACCGCAACAC CTTTGTCAAG 22782 282 1.69e-06 GAAACCCTAA CCCCCTCAACAC GCAGTACGAA 267952 488 2.53e-06 CCCTCCACTC CCCAATCAACAC C 1311 465 3.12e-06 TTTCCCAACA CCAACCCAGCAC AGCTCACCAA 10224 105 3.86e-06 ATTTCATCTA CCATCTCACCAC CACAGACGGT 23804 205 7.02e-06 AAGACGCTTC CCATCTCAATAC TTCTGTTATA 25375 408 7.51e-06 CGTCGTGCCA CCTTCCCAACAC ACTGCCCAGA 24853 370 9.02e-06 CAAAGAAGCT TCAACCCAACAC ATGTTACATG 23481 385 1.29e-05 GCGTTTCCCG CCATATCAACGC CTACTCACAA 2295 101 2.14e-05 TTGCCTGGAT CAGAATCAACAC GGCAGACGCG 24137 22 2.29e-05 CCAAAGGCAT CGGTATCAACAC ATATTGTTCG 36013 403 2.69e-05 CCGTCGTTCC ACCACGCAGCAC AGCTCATTGC 2092 248 2.86e-05 CGACCATGTA TCGTATCAGCAC ATGAAATGGC 3037 487 4.07e-05 TCTATAATCC ACAACTCAACAA CC 2505 139 5.57e-05 TCCGTATCCT AACTCTCAGCAC TTTGCCGACG 23271 452 5.57e-05 GACACCCTAT CCGCCCCAAAAC AGCAACATCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 6734 2.9e-07 487_[+3]_1 23939 1.4e-06 299_[+3]_189 25062 1.7e-06 102_[+3]_386 22782 1.7e-06 281_[+3]_207 267952 2.5e-06 487_[+3]_1 1311 3.1e-06 464_[+3]_24 10224 3.9e-06 104_[+3]_384 23804 7e-06 204_[+3]_284 25375 7.5e-06 407_[+3]_81 24853 9e-06 369_[+3]_119 23481 1.3e-05 384_[+3]_104 2295 2.1e-05 100_[+3]_388 24137 2.3e-05 21_[+3]_467 36013 2.7e-05 402_[+3]_86 2092 2.9e-05 247_[+3]_241 3037 4.1e-05 486_[+3]_2 2505 5.6e-05 138_[+3]_350 23271 5.6e-05 451_[+3]_37 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 3 width=12 seqs=18 6734 ( 488) CCATCGCAACAC 1 23939 ( 300) CCATAGCAACAC 1 25062 ( 103) CCACCGCAACAC 1 22782 ( 282) CCCCCTCAACAC 1 267952 ( 488) CCCAATCAACAC 1 1311 ( 465) CCAACCCAGCAC 1 10224 ( 105) CCATCTCACCAC 1 23804 ( 205) CCATCTCAATAC 1 25375 ( 408) CCTTCCCAACAC 1 24853 ( 370) TCAACCCAACAC 1 23481 ( 385) CCATATCAACGC 1 2295 ( 101) CAGAATCAACAC 1 24137 ( 22) CGGTATCAACAC 1 36013 ( 403) ACCACGCAGCAC 1 2092 ( 248) TCGTATCAGCAC 1 3037 ( 487) ACAACTCAACAA 1 2505 ( 139) AACTCTCAGCAC 1 23271 ( 452) CCGCCCCAAAAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 13692 bayes= 10.4181 E= 3.6e+000 -68 161 -1081 -127 -127 182 -203 -1081 90 -9 -3 -227 31 -50 -1081 90 31 150 -1081 -1081 -1081 -9 -3 105 -1081 208 -1081 -1081 190 -1081 -1081 -1081 143 -209 -3 -1081 -227 191 -1081 -227 182 -1081 -203 -1081 -227 200 -1081 -1081 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 18 E= 3.6e+000 0.166667 0.722222 0.000000 0.111111 0.111111 0.833333 0.055556 0.000000 0.500000 0.222222 0.222222 0.055556 0.333333 0.166667 0.000000 0.500000 0.333333 0.666667 0.000000 0.000000 0.000000 0.222222 0.222222 0.555556 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.722222 0.055556 0.222222 0.000000 0.055556 0.888889 0.000000 0.055556 0.944444 0.000000 0.055556 0.000000 0.055556 0.944444 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 regular expression -------------------------------------------------------------------------------- CC[ACG][TA][CA][TCG]CA[AG]CAC -------------------------------------------------------------------------------- Time 19.98 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 10047 3.43e-04 156_[+1(1.15e-08)]_323 10224 5.37e-04 104_[+3(3.86e-06)]_246_\ [+2(3.88e-05)]_126 10603 2.50e-01 500 1311 7.27e-05 30_[+2(1.25e-06)]_422_\ [+3(3.12e-06)]_24 2092 4.52e-07 123_[+2(1.05e-06)]_112_\ [+3(2.86e-05)]_156_[+1(5.99e-07)]_64 21668 4.73e-04 129_[+1(6.88e-08)]_350 22782 1.35e-10 27_[+1(3.36e-10)]_68_[+2(4.67e-06)]_\ [+2(1.25e-05)]_141_[+3(1.69e-06)]_207 2295 2.38e-05 100_[+3(2.14e-05)]_204_\ [+1(2.59e-07)]_163 23271 3.25e-05 162_[+1(2.72e-08)]_268_\ [+3(5.57e-05)]_37 23481 8.73e-04 86_[+2(3.62e-05)]_286_\ [+3(1.29e-05)]_104 23556 5.72e-03 104_[+2(2.98e-06)]_384 23731 6.45e-06 100_[+2(4.41e-05)]_4_[+1(4.85e-09)]_\ 363 23804 2.55e-09 204_[+3(7.02e-06)]_85_\ [+1(4.32e-09)]_120_[+2(2.06e-06)]_46 23939 1.15e-02 299_[+3(1.43e-06)]_189 24137 3.08e-03 21_[+3(2.29e-05)]_225_\ [+2(5.93e-05)]_230 24853 7.81e-04 269_[+2(7.89e-06)]_88_\ [+3(9.02e-06)]_119 2505 1.75e-02 116_[+1(7.27e-05)]_1_[+3(5.57e-05)]_\ 350 25062 1.01e-03 73_[+3(4.18e-06)]_17_[+3(1.69e-06)]_\ 131_[+2(5.58e-05)]_243 25072 1.96e-02 310_[+2(1.25e-05)]_178 25350 8.52e-02 326_[+2(3.12e-05)]_162 25375 8.91e-07 188_[+1(1.27e-08)]_198_\ [+3(7.51e-06)]_81 267952 5.19e-05 347_[+2(1.47e-06)]_128_\ [+3(2.53e-06)]_1 3037 2.97e-03 461_[+2(5.93e-05)]_13_\ [+3(4.07e-05)]_2 34043 3.66e-05 196_[+1(1.65e-07)]_195_\ [+2(1.43e-05)]_76 36013 5.22e-02 402_[+3(2.69e-05)]_86 4104 2.61e-02 35_[+2(6.29e-05)]_271_\ [+2(3.88e-05)]_48_[+2(2.98e-06)]_110 41328 4.07e-01 500 6734 3.25e-11 80_[+2(2.09e-07)]_6_[+1(9.34e-09)]_\ 197_[+3(3.80e-05)]_159_[+3(2.95e-07)]_1 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because nmotifs = 3 reached. ******************************************************************************** CPU: seaotter.hsd1.wa.comcast.net ********************************************************************************