******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.10.0 (Release date: Wed May 21 10:35:36 2014 +1000) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net. This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme.nbcr.net. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= motifs/70/70.seqs.fa ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ 10241 1.0000 500 10280 1.0000 500 11041 1.0000 500 1449 1.0000 500 1584 1.0000 500 18771 1.0000 500 21619 1.0000 500 22880 1.0000 500 23725 1.0000 500 24484 1.0000 500 25040 1.0000 500 261169 1.0000 500 264440 1.0000 500 270329 1.0000 500 31091 1.0000 500 35532 1.0000 500 7474 1.0000 500 8302 1.0000 500 974 1.0000 500 9747 1.0000 500 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme motifs/70/70.seqs.fa -oc motifs/70 -dna -minw 12 -maxw 21 -nmotifs 3 -maxsize 500000 model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 12 maxw= 21 minic= 0.00 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 20 wnsites= 0.8 theta: prob= 1 spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 10000 N= 20 strands: + sample: seed= 0 seqfrac= 1 Letter frequencies in dataset: A 0.259 C 0.230 G 0.245 T 0.266 Background letter frequencies (from dataset with add-one prior applied): A 0.259 C 0.230 G 0.245 T 0.266 ******************************************************************************** ******************************************************************************** MOTIF 1 MEME width = 20 sites = 15 llr = 192 E-value = 1.5e-004 ******************************************************************************** -------------------------------------------------------------------------------- Motif 1 Description -------------------------------------------------------------------------------- Simplified A 13:25371611531:7::7: pos.-specific C :32::111:3:225:1:::: probability G 91675537379333a29a37 matrix T :321:1:11:::2:::1:13 bits 2.1 * * 1.9 * * 1.7 * * 1.5 * * * ** Relative 1.3 * * * ** Entropy 1.1 * * * * ** * (18.4 bits) 0.8 * ** ** ** ****** 0.6 * *** ***** ******* 0.4 * ********** ******* 0.2 * ********** ******* 0.0 -------------------- Multilevel GAGGAGAGAGGAGCGAGGAG consensus CCAGAG GC GAG G GT sequence TT CC T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------------------- 23725 311 5.15e-10 AGGGTGATGC GAGAAGAGAGGAGGGAGGAG GAGGAGGCTG 270329 442 1.90e-09 TCGAGACGAC GTGGAGAGACGCTCGAGGAG AGGAACGTGT 25040 369 1.90e-09 TCGAGACGAC GTGGAGAGACGCTCGAGGAG AGGAACGTGT 1584 171 8.05e-09 AAGTGGCGTG GAGGAGAGAAGAAGGAGGAG GTATTGGCGG 8302 30 1.64e-08 TTGTTTTTAT GCGGGGAGAGGAGAGAGGGT CGTTCTCGTG 31091 14 3.29e-07 CATTGTCTTC GCGGGCGGGGGGGGGGGGAG CTTCTTGTGG 7474 290 5.26e-07 TTTTTTTGTA GATGAGAGAGAGAGGGGGGG GGGTCGGCAG 35532 257 1.05e-06 GGCGACAGCG GCCAGGACGGGCAGGAGGAG CTTCGACATT 1449 102 1.14e-06 GAGAGTGGAT GGTGATATGGGACCGAGGAG ATTTTTCAGG 10241 174 1.57e-06 AGCAGCCAAG AGCTGGAGACGAGCGAGGAT ACTCAAGACG 9747 250 2.83e-06 CCCTTTTGAC GTCGGTCGTCGGCCGAGGAG ACTGCACAGC 24484 45 2.83e-06 GGCGTAGCCG GAGGAAGAAGAGTCGAGGGT CGTCGGCTGT 974 55 3.73e-06 ATGCGATGCT GAGAGAAGTGGAACGCGGTG CTTTGTGCAC 10280 443 4.84e-06 CGGTCGTTTG GCTTGAGGAGGGGCGATGGT ATCGTAGCGT 18771 233 2.24e-05 GGGGAGCCTC ATGGAAGAGGGACAGGTGAG TGAACGTTCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 23725 5.1e-10 310_[+1]_170 270329 1.9e-09 441_[+1]_39 25040 1.9e-09 368_[+1]_112 1584 8.1e-09 170_[+1]_310 8302 1.6e-08 29_[+1]_451 31091 3.3e-07 13_[+1]_467 7474 5.3e-07 289_[+1]_191 35532 1.1e-06 256_[+1]_224 1449 1.1e-06 101_[+1]_379 10241 1.6e-06 173_[+1]_307 9747 2.8e-06 249_[+1]_231 24484 2.8e-06 44_[+1]_436 974 3.7e-06 54_[+1]_426 10280 4.8e-06 442_[+1]_38 18771 2.2e-05 232_[+1]_248 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 1 width=20 seqs=15 23725 ( 311) GAGAAGAGAGGAGGGAGGAG 1 270329 ( 442) GTGGAGAGACGCTCGAGGAG 1 25040 ( 369) GTGGAGAGACGCTCGAGGAG 1 1584 ( 171) GAGGAGAGAAGAAGGAGGAG 1 8302 ( 30) GCGGGGAGAGGAGAGAGGGT 1 31091 ( 14) GCGGGCGGGGGGGGGGGGAG 1 7474 ( 290) GATGAGAGAGAGAGGGGGGG 1 35532 ( 257) GCCAGGACGGGCAGGAGGAG 1 1449 ( 102) GGTGATATGGGACCGAGGAG 1 10241 ( 174) AGCTGGAGACGAGCGAGGAT 1 9747 ( 250) GTCGGTCGTCGGCCGAGGAG 1 24484 ( 45) GAGGAAGAAGAGTCGAGGGT 1 974 ( 55) GAGAGAAGTGGAACGCGGTG 1 10280 ( 443) GCTTGAGGAGGGGCGATGGT 1 18771 ( 233) ATGGAAGAGGGACAGGTGAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 20 n= 9620 bayes= 10.5986 E= 1.5e-004 -96 -1055 182 -1055 36 21 -88 0 -1055 -20 129 -41 -37 -1055 144 -99 104 -1055 93 -1055 4 -178 112 -99 136 -178 12 -1055 -96 -178 158 -199 121 -1055 12 -99 -196 21 144 -1055 -96 -1055 182 -1055 85 -20 44 -1055 4 -20 44 -41 -96 121 44 -1055 -1055 -1055 203 -1055 150 -178 -29 -1055 -1055 -1055 182 -99 -1055 -1055 203 -1055 136 -1055 12 -199 -1055 -1055 158 0 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 20 nsites= 15 E= 1.5e-004 0.133333 0.000000 0.866667 0.000000 0.333333 0.266667 0.133333 0.266667 0.000000 0.200000 0.600000 0.200000 0.200000 0.000000 0.666667 0.133333 0.533333 0.000000 0.466667 0.000000 0.266667 0.066667 0.533333 0.133333 0.666667 0.066667 0.266667 0.000000 0.133333 0.066667 0.733333 0.066667 0.600000 0.000000 0.266667 0.133333 0.066667 0.266667 0.666667 0.000000 0.133333 0.000000 0.866667 0.000000 0.466667 0.200000 0.333333 0.000000 0.266667 0.200000 0.333333 0.200000 0.133333 0.533333 0.333333 0.000000 0.000000 0.000000 1.000000 0.000000 0.733333 0.066667 0.200000 0.000000 0.000000 0.000000 0.866667 0.133333 0.000000 0.000000 1.000000 0.000000 0.666667 0.000000 0.266667 0.066667 0.000000 0.000000 0.733333 0.266667 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 regular expression -------------------------------------------------------------------------------- G[ACT][GCT][GA][AG][GA][AG]G[AG][GC]G[AGC][GACT][CG]G[AG]GG[AG][GT] -------------------------------------------------------------------------------- Time 3.72 secs. ******************************************************************************** ******************************************************************************** MOTIF 2 MEME width = 16 sites = 19 llr = 201 E-value = 2.5e-003 ******************************************************************************** -------------------------------------------------------------------------------- Motif 2 Description -------------------------------------------------------------------------------- Simplified A 1::11::1:1::1::: pos.-specific C ::3:12:12:2::::2 probability G 27:6235619253:83 matrix T 7373755271756a26 bits 2.1 1.9 * 1.7 * 1.5 * ** Relative 1.3 * * ** Entropy 1.1 ** * * * ** (15.2 bits) 0.8 ***** * ******* 0.6 ***** * ******** 0.4 **************** 0.2 **************** 0.0 ---------------- Multilevel TGTGTTTGTGTGTTGT consensus GTCT GG TG G sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ---------------- 10241 93 2.54e-08 TTTCTTGCGC TGTGTGGGTGTTGTGT CTGTGGAGGT 270329 205 3.09e-08 GCATGAGGTG TGTGGTTGTGTGTTGT GTTGAACGAA 25040 132 3.09e-08 GCATGAGGTG TGTGGTTGTGTGTTGT GTTGAACGAA 264440 137 2.60e-07 AGGAGGTTGA TTTGTTTGTGGTTTGT TAGGCATTGT 261169 71 3.62e-07 AAACGATCAT TGTTTCGGTGGGTTGT ATAGCTTGGC 9747 384 7.07e-07 GTCGGTGCTC TTCGTTGTTGTTTTGT GTTGCGAGGA 974 460 9.70e-07 CCTCTTCCCA GGTGTGTGTGTTGTGC AGCACACGCC 10280 69 1.55e-06 GACGGACAGA GGTGTTGGTGTGTTTC TCGTGGGTAC 1584 308 2.29e-06 GCCACCGACG AGTGTGGCTGTTTTGT TGAGGGAGAT 8302 236 2.83e-06 GATTGCTTGT GGTGTTGTTGCGGTGT GGGGCCGGAC 23725 274 7.03e-06 TTCTCCCTTA TGTTTTGGGGCTGTGG GCAGTGCTCG 24484 21 1.24e-05 AGCAGTCGGG TGTTCTGGCGTGGTGG CGTAGCCGGA 21619 69 1.34e-05 TGTACTAACG TGCTTTGATATGTTGT TAGACAAGGC 1449 327 2.57e-05 GGAAGAGGTA GTCGTCTGTGTTGTTG CCGAGCTGAC 35532 290 3.14e-05 CGACATTTTC TTCTTGTTGGTGTTGG TAGGAAGTTG 31091 235 3.35e-05 CTTCGGTAAG TGTGTGTCTGTGATTG TCGGAAGTGC 22880 126 5.77e-05 ATGATGATTC TGCTACTACGTGTTGT GTTACATCGC 11041 21 5.77e-05 CCCTTAGCCC TTCAGCTGTGCTTTGT ATGAACGCAG 18771 313 9.35e-05 TTTGATTGCA AGTGTTTGCTGTTTGC TACAGAGACA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 10241 2.5e-08 92_[+2]_392 270329 3.1e-08 204_[+2]_280 25040 3.1e-08 131_[+2]_353 264440 2.6e-07 136_[+2]_348 261169 3.6e-07 70_[+2]_414 9747 7.1e-07 383_[+2]_101 974 9.7e-07 459_[+2]_25 10280 1.5e-06 68_[+2]_416 1584 2.3e-06 307_[+2]_177 8302 2.8e-06 235_[+2]_249 23725 7e-06 273_[+2]_211 24484 1.2e-05 20_[+2]_464 21619 1.3e-05 68_[+2]_416 1449 2.6e-05 326_[+2]_158 35532 3.1e-05 289_[+2]_195 31091 3.3e-05 234_[+2]_250 22880 5.8e-05 125_[+2]_359 11041 5.8e-05 20_[+2]_464 18771 9.3e-05 312_[+2]_172 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 2 width=16 seqs=19 10241 ( 93) TGTGTGGGTGTTGTGT 1 270329 ( 205) TGTGGTTGTGTGTTGT 1 25040 ( 132) TGTGGTTGTGTGTTGT 1 264440 ( 137) TTTGTTTGTGGTTTGT 1 261169 ( 71) TGTTTCGGTGGGTTGT 1 9747 ( 384) TTCGTTGTTGTTTTGT 1 974 ( 460) GGTGTGTGTGTTGTGC 1 10280 ( 69) GGTGTTGGTGTGTTTC 1 1584 ( 308) AGTGTGGCTGTTTTGT 1 8302 ( 236) GGTGTTGTTGCGGTGT 1 23725 ( 274) TGTTTTGGGGCTGTGG 1 24484 ( 21) TGTTCTGGCGTGGTGG 1 21619 ( 69) TGCTTTGATATGTTGT 1 1449 ( 327) GTCGTCTGTGTTGTTG 1 35532 ( 290) TTCTTGTTGGTGTTGG 1 31091 ( 235) TGTGTGTCTGTGATTG 1 22880 ( 126) TGCTACTACGTGTTGT 1 11041 ( 21) TTCAGCTGTGCTTTGT 1 18771 ( 313) AGTGTTTGCTGTTTGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 9700 bayes= 9.18819 E= 2.5e-003 -130 -1089 -22 136 -1089 -1089 159 -1 -1089 46 -1089 136 -230 -1089 137 25 -230 -213 -63 147 -1089 -13 10 98 -1089 -1089 95 98 -130 -113 137 -75 -1089 -54 -122 147 -230 -1089 187 -233 -1089 -54 -63 136 -1089 -1089 110 83 -230 -1089 37 125 -1089 -1089 -1089 191 -1089 -1089 178 -75 -1089 -54 10 112 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 19 E= 2.5e-003 0.105263 0.000000 0.210526 0.684211 0.000000 0.000000 0.736842 0.263158 0.000000 0.315789 0.000000 0.684211 0.052632 0.000000 0.631579 0.315789 0.052632 0.052632 0.157895 0.736842 0.000000 0.210526 0.263158 0.526316 0.000000 0.000000 0.473684 0.526316 0.105263 0.105263 0.631579 0.157895 0.000000 0.157895 0.105263 0.736842 0.052632 0.000000 0.894737 0.052632 0.000000 0.157895 0.157895 0.684211 0.000000 0.000000 0.526316 0.473684 0.052632 0.000000 0.315789 0.631579 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.842105 0.157895 0.000000 0.157895 0.263158 0.578947 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 regular expression -------------------------------------------------------------------------------- [TG][GT][TC][GT]T[TGC][TG]GTGT[GT][TG]TG[TG] -------------------------------------------------------------------------------- Time 7.20 secs. ******************************************************************************** ******************************************************************************** MOTIF 3 MEME width = 21 sites = 5 llr = 105 E-value = 4.1e-002 ******************************************************************************** -------------------------------------------------------------------------------- Motif 3 Description -------------------------------------------------------------------------------- Simplified A 26::::::2::::22:::24: pos.-specific C 84a828:8:8a:a6868a:2a probability G :::::::22:::::::::::: matrix T :::282a:62:a:2:42:84: bits 2.1 * * * * * 1.9 * * *** * * 1.7 * * *** * * 1.5 * ** *** * * Relative 1.3 * ****** **** * *** * Entropy 1.1 ******** **** ***** * (30.2 bits) 0.8 ******** **** ***** * 0.6 ******************* * 0.4 ********************* 0.2 ********************* 0.0 --------------------- Multilevel CACCTCTCTCCTCCCCCCTAC consensus AC TCT GAT AATT AT sequence G T C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------------- 24484 260 6.84e-12 GCCCTGCGCA ACCCTCTCTCCTCCCCCCTAC CTCTCGCCGT 11041 451 1.09e-10 GAAAACGAAC CCCTCCTCTCCTCCCTCCTTC ACAACCCCAC 974 402 2.76e-10 CTCCTCCTCA CACCTCTGTCCTCTCTCCAAC CCCATCGACG 21619 413 3.07e-10 CTTCGTTTAT CACCTTTCGCCTCCACCCTCC AGCAATTGCC 35532 76 5.42e-10 CAATACAATG CACCTCTCATCTCACCTCTTC GTCGATGACA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 24484 6.8e-12 259_[+3]_220 11041 1.1e-10 450_[+3]_29 974 2.8e-10 401_[+3]_78 21619 3.1e-10 412_[+3]_67 35532 5.4e-10 75_[+3]_404 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 3 width=21 seqs=5 24484 ( 260) ACCCTCTCTCCTCCCCCCTAC 1 11041 ( 451) CCCTCCTCTCCTCCCTCCTTC 1 974 ( 402) CACCTCTGTCCTCTCTCCAAC 1 21619 ( 413) CACCTTTCGCCTCCACCCTCC 1 35532 ( 76) CACCTCTCATCTCACCTCTTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 9600 bayes= 11.1578 E= 4.1e-002 -37 180 -897 -897 121 80 -897 -897 -897 212 -897 -897 -897 180 -897 -41 -897 -20 -897 159 -897 180 -897 -41 -897 -897 -897 191 -897 180 -29 -897 -37 -897 -29 117 -897 180 -897 -41 -897 212 -897 -897 -897 -897 -897 191 -897 212 -897 -897 -37 138 -897 -41 -37 180 -897 -897 -897 138 -897 59 -897 180 -897 -41 -897 212 -897 -897 -37 -897 -897 159 63 -20 -897 59 -897 212 -897 -897 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 5 E= 4.1e-002 0.200000 0.800000 0.000000 0.000000 0.600000 0.400000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.800000 0.000000 0.200000 0.000000 0.200000 0.000000 0.800000 0.000000 0.800000 0.000000 0.200000 0.000000 0.000000 0.000000 1.000000 0.000000 0.800000 0.200000 0.000000 0.200000 0.000000 0.200000 0.600000 0.000000 0.800000 0.000000 0.200000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.200000 0.600000 0.000000 0.200000 0.200000 0.800000 0.000000 0.000000 0.000000 0.600000 0.000000 0.400000 0.000000 0.800000 0.000000 0.200000 0.000000 1.000000 0.000000 0.000000 0.200000 0.000000 0.000000 0.800000 0.400000 0.200000 0.000000 0.400000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 regular expression -------------------------------------------------------------------------------- [CA][AC]C[CT][TC][CT]T[CG][TAG][CT]CTC[CAT][CA][CT][CT]C[TA][ATC]C -------------------------------------------------------------------------------- Time 10.61 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 10241 1.18e-07 92_[+2(2.54e-08)]_65_[+1(1.57e-06)]_\ 307 10280 1.27e-04 68_[+2(1.55e-06)]_358_\ [+1(4.84e-06)]_38 11041 3.23e-07 20_[+2(5.77e-05)]_414_\ [+3(1.09e-10)]_29 1449 3.14e-05 101_[+1(1.14e-06)]_205_\ [+2(2.57e-05)]_132_[+3(7.39e-05)]_5 1584 8.11e-07 170_[+1(8.05e-09)]_117_\ [+2(2.29e-06)]_177 18771 3.58e-03 232_[+1(2.24e-05)]_60_\ [+2(9.35e-05)]_172 21619 2.02e-07 68_[+2(1.34e-05)]_328_\ [+3(3.07e-10)]_67 22880 1.35e-01 125_[+2(5.77e-05)]_359 23725 1.01e-07 133_[+1(7.18e-05)]_89_\ [+2(8.88e-05)]_15_[+2(7.03e-06)]_21_[+1(5.15e-10)]_126_[+2(7.21e-05)]_28 24484 1.40e-11 20_[+2(1.24e-05)]_8_[+1(2.83e-06)]_\ 195_[+3(6.84e-12)]_220 25040 4.05e-09 131_[+2(3.09e-08)]_221_\ [+1(1.90e-09)]_112 261169 2.00e-03 70_[+2(3.62e-07)]_166_\ [+2(2.57e-05)]_232 264440 9.49e-04 99_[+2(3.79e-05)]_21_[+2(2.60e-07)]_\ 348 270329 4.17e-09 204_[+2(3.09e-08)]_221_\ [+1(1.90e-09)]_39 31091 6.51e-06 13_[+1(3.29e-07)]_201_\ [+2(3.35e-05)]_173_[+3(3.29e-05)]_56 35532 7.77e-10 75_[+3(5.42e-10)]_160_\ [+1(1.05e-06)]_13_[+2(3.14e-05)]_153_[+3(5.13e-05)]_21 7474 2.65e-03 118_[+1(2.98e-05)]_151_\ [+1(5.26e-07)]_191 8302 2.01e-06 29_[+1(1.64e-08)]_30_[+2(7.21e-05)]_\ 140_[+2(2.83e-06)]_249 974 5.30e-11 54_[+1(3.73e-06)]_327_\ [+3(2.76e-10)]_37_[+2(9.70e-07)]_25 9747 9.28e-06 249_[+1(2.83e-06)]_114_\ [+2(7.07e-07)]_101 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because nmotifs = 3 reached. ******************************************************************************** CPU: seaotter.hsd1.wa.comcast.net ********************************************************************************