******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.10.0 (Release date: Wed May 21 10:35:36 2014 +1000) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net. This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme.nbcr.net. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= motifs/80/80.seqs.fa ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ 10641 1.0000 500 12140 1.0000 500 1804 1.0000 500 18795 1.0000 500 21159 1.0000 500 22875 1.0000 500 23054 1.0000 500 23729 1.0000 500 25453 1.0000 500 25557 1.0000 500 32557 1.0000 500 34403 1.0000 500 3537 1.0000 500 35639 1.0000 500 36137 1.0000 500 4743 1.0000 500 6104 1.0000 500 7652 1.0000 500 8453 1.0000 500 9367 1.0000 500 bd842 1.0000 500 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme motifs/80/80.seqs.fa -oc motifs/80 -dna -minw 12 -maxw 21 -nmotifs 3 -maxsize 500000 model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 12 maxw= 21 minic= 0.00 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 21 wnsites= 0.8 theta: prob= 1 spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 10500 N= 21 strands: + sample: seed= 0 seqfrac= 1 Letter frequencies in dataset: A 0.269 C 0.227 G 0.244 T 0.260 Background letter frequencies (from dataset with add-one prior applied): A 0.269 C 0.227 G 0.244 T 0.260 ******************************************************************************** ******************************************************************************** MOTIF 1 MEME width = 16 sites = 14 llr = 176 E-value = 3.7e-005 ******************************************************************************** -------------------------------------------------------------------------------- Motif 1 Description -------------------------------------------------------------------------------- Simplified A :2::31112::::1:1 pos.-specific C :4::::26:11:::11 probability G 6:a6:66:81:a6188 matrix T 44:472:3:79:491: bits 2.1 1.9 * * 1.7 * * 1.5 * ** Relative 1.3 * * ** * Entropy 1.1 * *** * ****** (18.1 bits) 0.9 * *** ********** 0.6 * ************** 0.4 **************** 0.2 **************** 0.0 ---------------- Multilevel GTGGTGGCGTTGGTGG consensus TC TATCTA T sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ---------------- 25453 193 2.49e-08 GTTGGGTGTT GAGGTGGCATTGGTGG AGGTAGCTCC 7652 214 3.83e-08 CGGCTGTGCG TCGGTAGCGTTGGTGG TTAAGAGGAT bd842 42 7.23e-08 CATGGTGCGT GTGTTTGTGTTGGTGG GGGTGAACCA 23729 52 1.65e-07 ACTACCATGG GTGGTGCAGTTGGTGG GAATGGTTTT 8453 25 2.47e-07 TGCAATGTTG TTGTTGGTGGTGGTGG CGGTGTCGGT 36137 459 2.47e-07 GGGCTTTGAT TCGGTGCCGTTGTTGC TCACCCACTG 34403 101 2.47e-07 CGGTGGGTGG GTGGTTGTGTTGGTGC GGTGTTTTCT 4743 133 3.32e-07 TGTCGGCGCT GTGTTGACGTTGGTTG AGGATGGCGC 9367 191 4.47e-07 TTGACCAATG TCGTTGCCGCTGTTGG TAGAAGAGTT 25557 465 1.09e-06 CTGGGTTGGG GTGGAGGCGCTGTGGG AGATACTGAG 3537 39 2.32e-06 CACGTCCTGC TCGGAAGCGTTGTTCG GCTTCTTCTT 6104 91 2.67e-06 TTCGTAGGCC GAGGAGACGTTGTTGA TTTCGTCTGA 22875 12 5.43e-06 GGTAGAGGTG GAGGAGGCAGTGGAGG TGATGTAGCA 35639 238 1.47e-05 AACACGATTG GCGTTTGTATCGTTTG GATTTTGATA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 25453 2.5e-08 192_[+1]_292 7652 3.8e-08 213_[+1]_271 bd842 7.2e-08 41_[+1]_443 23729 1.6e-07 51_[+1]_433 8453 2.5e-07 24_[+1]_460 36137 2.5e-07 458_[+1]_26 34403 2.5e-07 100_[+1]_384 4743 3.3e-07 132_[+1]_352 9367 4.5e-07 190_[+1]_294 25557 1.1e-06 464_[+1]_20 3537 2.3e-06 38_[+1]_446 6104 2.7e-06 90_[+1]_394 22875 5.4e-06 11_[+1]_473 35639 1.5e-05 237_[+1]_247 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 1 width=16 seqs=14 25453 ( 193) GAGGTGGCATTGGTGG 1 7652 ( 214) TCGGTAGCGTTGGTGG 1 bd842 ( 42) GTGTTTGTGTTGGTGG 1 23729 ( 52) GTGGTGCAGTTGGTGG 1 8453 ( 25) TTGTTGGTGGTGGTGG 1 36137 ( 459) TCGGTGCCGTTGTTGC 1 34403 ( 101) GTGGTTGTGTTGGTGC 1 4743 ( 133) GTGTTGACGTTGGTTG 1 9367 ( 191) TCGTTGCCGCTGTTGG 1 25557 ( 465) GTGGAGGCGCTGTGGG 1 3537 ( 39) TCGGAAGCGTTGTTCG 1 6104 ( 91) GAGGAGACGTTGTTGA 1 22875 ( 12) GAGGAGGCAGTGGAGG 1 35639 ( 238) GCGTTTGTATCGTTTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 10185 bayes= 10.1112 E= 3.7e-005 -1045 -1045 140 46 -33 65 -1045 72 -1045 -1045 203 -1045 -1045 -1045 140 46 9 -1045 -1045 146 -91 -1045 140 -28 -91 -8 140 -1045 -191 150 -1045 14 -33 -1045 168 -1045 -1045 -67 -77 146 -1045 -166 -1045 184 -1045 -1045 203 -1045 -1045 -1045 123 72 -191 -1045 -177 172 -1045 -166 168 -86 -191 -67 168 -1045 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 14 E= 3.7e-005 0.000000 0.000000 0.642857 0.357143 0.214286 0.357143 0.000000 0.428571 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.642857 0.357143 0.285714 0.000000 0.000000 0.714286 0.142857 0.000000 0.642857 0.214286 0.142857 0.214286 0.642857 0.000000 0.071429 0.642857 0.000000 0.285714 0.214286 0.000000 0.785714 0.000000 0.000000 0.142857 0.142857 0.714286 0.000000 0.071429 0.000000 0.928571 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.571429 0.428571 0.071429 0.000000 0.071429 0.857143 0.000000 0.071429 0.785714 0.142857 0.071429 0.142857 0.785714 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 regular expression -------------------------------------------------------------------------------- [GT][TCA]G[GT][TA][GT][GC][CT][GA]TTG[GT]TGG -------------------------------------------------------------------------------- Time 3.99 secs. ******************************************************************************** ******************************************************************************** MOTIF 2 MEME width = 15 sites = 12 llr = 155 E-value = 7.5e-005 ******************************************************************************** -------------------------------------------------------------------------------- Motif 2 Description -------------------------------------------------------------------------------- Simplified A 468:681:95:88:8 pos.-specific C 443a2398:3a1293 probability G ::::2::2:1:1::: matrix T 2:::1:::12:::1: bits 2.1 * * 1.9 * * 1.7 * * * * 1.5 * *** * * Relative 1.3 * *** * ** Entropy 1.1 *** **** ***** (18.6 bits) 0.9 *** **** ***** 0.6 *** **** ***** 0.4 ********* ***** 0.2 *************** 0.0 --------------- Multilevel AAACAACCAACAACA consensus CCC C C C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- --------------- 1804 225 2.21e-08 CAAACCAAGA CCACAACCATCAACA GCAACGACCA 34403 315 3.31e-08 TGTAGATGAT ACACCACCAACAACA TACAACAAAG 6104 465 5.76e-08 CTCCTCACAC CACCACCCAACAACA TTGGCAGAGA 23729 437 7.58e-08 GCCTTTGTTT CCCCAACCAACAACC AACCGTCAAC 36137 288 9.17e-08 CACACAACCC AAACAACCACCACCA CCACTACCCA 21159 391 1.03e-07 AGAAAGGAGG CAACGACCATCAACA ACAGCATTGG bd842 430 3.17e-07 GGAGTGAAGA AAACCCCCAACAACC TCTCTTCCTC 4743 354 7.01e-07 CTTAAAATAC AAACGAACAACAACA CTGTCATTTT 35639 484 2.36e-06 TGAGAACAAA TCACAACCACCGCCA CC 12140 320 2.67e-06 GGGCTTGCGA TAACTACCAACAATA CAACAACGTG 32557 428 3.01e-06 TTCACAAGGC AAACAACGAGCCACA AATCAGAGAT 18795 368 9.02e-06 ACGCCTGCCT CCCCACCGTCCAACC CTCCCCCGAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 1804 2.2e-08 224_[+2]_261 34403 3.3e-08 314_[+2]_171 6104 5.8e-08 464_[+2]_21 23729 7.6e-08 436_[+2]_49 36137 9.2e-08 287_[+2]_198 21159 1e-07 390_[+2]_95 bd842 3.2e-07 429_[+2]_56 4743 7e-07 353_[+2]_132 35639 2.4e-06 483_[+2]_2 12140 2.7e-06 319_[+2]_166 32557 3e-06 427_[+2]_58 18795 9e-06 367_[+2]_118 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 2 width=15 seqs=12 1804 ( 225) CCACAACCATCAACA 1 34403 ( 315) ACACCACCAACAACA 1 6104 ( 465) CACCACCCAACAACA 1 23729 ( 437) CCCCAACCAACAACC 1 36137 ( 288) AAACAACCACCACCA 1 21159 ( 391) CAACGACCATCAACA 1 bd842 ( 430) AAACCCCCAACAACC 1 4743 ( 354) AAACGAACAACAACA 1 35639 ( 484) TCACAACCACCGCCA 1 12140 ( 320) TAACTACCAACAATA 1 32557 ( 428) AAACAACGAGCCACA 1 18795 ( 368) CCCCACCGTCCAACC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 10206 bayes= 10.1784 E= 7.5e-005 63 88 -1023 -64 112 88 -1023 -1023 148 14 -1023 -1023 -1023 214 -1023 -1023 112 -44 -55 -164 148 14 -1023 -1023 -169 201 -1023 -1023 -1023 188 -55 -1023 177 -1023 -1023 -164 89 14 -155 -64 -1023 214 -1023 -1023 163 -144 -155 -1023 163 -44 -1023 -1023 -1023 201 -1023 -164 148 14 -1023 -1023 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 12 E= 7.5e-005 0.416667 0.416667 0.000000 0.166667 0.583333 0.416667 0.000000 0.000000 0.750000 0.250000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.583333 0.166667 0.166667 0.083333 0.750000 0.250000 0.000000 0.000000 0.083333 0.916667 0.000000 0.000000 0.000000 0.833333 0.166667 0.000000 0.916667 0.000000 0.000000 0.083333 0.500000 0.250000 0.083333 0.166667 0.000000 1.000000 0.000000 0.000000 0.833333 0.083333 0.083333 0.000000 0.833333 0.166667 0.000000 0.000000 0.000000 0.916667 0.000000 0.083333 0.750000 0.250000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 regular expression -------------------------------------------------------------------------------- [AC][AC][AC]CA[AC]CCA[AC]CAAC[AC] -------------------------------------------------------------------------------- Time 7.83 secs. ******************************************************************************** ******************************************************************************** MOTIF 3 MEME width = 12 sites = 21 llr = 183 E-value = 9.6e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif 3 Description -------------------------------------------------------------------------------- Simplified A ::221::::1:1 pos.-specific C 3555:99:a:86 probability G 11223::::1:1 matrix T 63:16::a:821 bits 2.1 * 1.9 ** 1.7 ** 1.5 **** * Relative 1.3 **** * Entropy 1.1 **** * (12.6 bits) 0.9 ****** 0.6 * * ******* 0.4 *** ******** 0.2 ************ 0.0 ------------ Multilevel TCCCTCCTCTCC consensus CTAGG sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------ 23054 413 3.22e-08 CGTCGGGAAA TCCCTCCTCTCC TTGCGACCGA 1804 280 1.50e-06 ACGCCGTACG CCCCTCCTCTCA CGTATACCGT 7652 113 3.62e-06 TGATGTGTGT TCACTCCTCTCG ACACTCCTAC 36137 485 6.66e-06 TCACCCACTG TTCTGCCTCTCC CTCA 9367 46 1.11e-05 AAGTGGCTAG TTCCGCCTCGCC CATTGGCTGT 6104 452 1.65e-05 TCCCAACACA CCCCTCCTCACA CCACCACCCA 23729 462 1.65e-05 AACCGTCAAC CCGGTCCTCTCT CTGCCTGCCT 25557 326 1.83e-05 TCGCAGCTTT TTCAGCCTCTCG CTGCCAATGA 12140 251 2.22e-05 ATTTTCTCCT GCCGACCTCTCC AAGAAAAGCA 4743 403 2.44e-05 GACACCCTCC CTGCGCCTCTCT TGTCACGTTA 34403 225 2.72e-05 GACTTTGCAG CTGGACCTCTCC TAATTAAAGT 32557 210 2.99e-05 ATATCGGTGT TCCATTCTCTCC CGCTTCATGT 18795 432 3.56e-05 CTCCCACAAC CTCAGCCTCACC AAACTAGAAC 22875 405 3.88e-05 ACGTAGTATG CCACACCTCACC CATCTCTTTT 35639 434 6.50e-05 AGCATCCTGC TGCTTCCTCTCG ACACGTCGTC bd842 459 7.01e-05 TTCCTCGTTC GCAGTCCTCTCT CTATCCATTG 25453 212 7.01e-05 TTGGTGGAGG TAGCTCCTCTTC ATTCAAAGGA 8453 55 1.10e-04 GTCGGTGGTA TCGCTCTTCTTC AGTCGGGACA 21159 346 1.46e-04 TCCTCAGACA TTCAGCCTCGTC TCCAACTTTT 10641 171 2.04e-04 CGGAACATCA TCAGTACTCTCA ATGCATTTGG 3537 198 4.13e-04 GGTGAAGGGA TGACTCATCTTC GTTGCTGTTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 23054 3.2e-08 412_[+3]_76 1804 1.5e-06 279_[+3]_209 7652 3.6e-06 112_[+3]_376 36137 6.7e-06 484_[+3]_4 9367 1.1e-05 45_[+3]_443 6104 1.7e-05 451_[+3]_37 23729 1.7e-05 461_[+3]_27 25557 1.8e-05 325_[+3]_163 12140 2.2e-05 250_[+3]_238 4743 2.4e-05 402_[+3]_86 34403 2.7e-05 224_[+3]_264 32557 3e-05 209_[+3]_279 18795 3.6e-05 431_[+3]_57 22875 3.9e-05 404_[+3]_84 35639 6.5e-05 433_[+3]_55 bd842 7e-05 458_[+3]_30 25453 7e-05 211_[+3]_277 8453 0.00011 54_[+3]_434 21159 0.00015 345_[+3]_143 10641 0.0002 170_[+3]_318 3537 0.00041 197_[+3]_291 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 3 width=12 seqs=21 23054 ( 413) TCCCTCCTCTCC 1 1804 ( 280) CCCCTCCTCTCA 1 7652 ( 113) TCACTCCTCTCG 1 36137 ( 485) TTCTGCCTCTCC 1 9367 ( 46) TTCCGCCTCGCC 1 6104 ( 452) CCCCTCCTCACA 1 23729 ( 462) CCGGTCCTCTCT 1 25557 ( 326) TTCAGCCTCTCG 1 12140 ( 251) GCCGACCTCTCC 1 4743 ( 403) CTGCGCCTCTCT 1 34403 ( 225) CTGGACCTCTCC 1 32557 ( 210) TCCATTCTCTCC 1 18795 ( 432) CTCAGCCTCACC 1 22875 ( 405) CCACACCTCACC 1 35639 ( 434) TGCTTCCTCTCG 1 bd842 ( 459) GCAGTCCTCTCT 1 25453 ( 212) TAGCTCCTCTTC 1 8453 ( 55) TCGCTCTTCTTC 1 21159 ( 346) TTCAGCCTCGTC 1 10641 ( 171) TCAGTACTCTCA 1 3537 ( 198) TGACTCATCTTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 10269 bayes= 8.93074 E= 9.6e-001 -1104 56 -136 114 -249 121 -136 36 -18 121 -4 -1104 -50 107 -4 -145 -91 -1104 23 114 -249 200 -1104 -245 -249 200 -1104 -245 -1104 -1104 -1104 194 -1104 214 -1104 -1104 -91 -1104 -136 155 -1104 184 -1104 -45 -91 133 -77 -86 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 21 E= 9.6e-001 0.000000 0.333333 0.095238 0.571429 0.047619 0.523810 0.095238 0.333333 0.238095 0.523810 0.238095 0.000000 0.190476 0.476190 0.238095 0.095238 0.142857 0.000000 0.285714 0.571429 0.047619 0.904762 0.000000 0.047619 0.047619 0.904762 0.000000 0.047619 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.142857 0.000000 0.095238 0.761905 0.000000 0.809524 0.000000 0.190476 0.142857 0.571429 0.142857 0.142857 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 regular expression -------------------------------------------------------------------------------- [TC][CT][CAG][CG][TG]CCTCTCC -------------------------------------------------------------------------------- Time 11.62 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 10641 1.11e-01 500 12140 7.71e-04 250_[+3(2.22e-05)]_57_\ [+2(2.67e-06)]_166 1804 2.93e-07 6_[+2(1.38e-05)]_203_[+2(2.21e-08)]_\ 40_[+3(1.50e-06)]_209 18795 1.14e-03 367_[+2(9.02e-06)]_49_\ [+3(3.56e-05)]_57 21159 2.03e-04 390_[+2(1.03e-07)]_95 22875 1.02e-03 11_[+1(5.43e-06)]_377_\ [+3(3.88e-05)]_84 23054 3.51e-04 4_[+3(9.47e-05)]_396_[+3(3.22e-08)]_\ 76 23729 7.70e-09 51_[+1(1.65e-07)]_369_\ [+2(7.58e-08)]_10_[+3(1.65e-05)]_27 25453 4.56e-05 192_[+1(2.49e-08)]_3_[+3(7.01e-05)]_\ 277 25557 2.25e-04 325_[+3(1.83e-05)]_127_\ [+1(1.09e-06)]_20 32557 1.34e-03 209_[+3(2.99e-05)]_85_\ [+2(4.35e-05)]_106_[+2(3.01e-06)]_58 34403 8.20e-09 100_[+1(2.47e-07)]_108_\ [+3(2.72e-05)]_78_[+2(3.31e-08)]_131_[+2(3.74e-05)]_25 3537 8.73e-04 38_[+1(2.32e-06)]_446 35639 3.34e-05 237_[+1(1.47e-05)]_180_\ [+3(6.50e-05)]_38_[+2(2.36e-06)]_2 36137 5.77e-09 254_[+2(4.79e-05)]_18_\ [+2(9.17e-08)]_[+2(6.03e-05)]_141_[+1(2.47e-07)]_10_[+3(6.66e-06)]_4 4743 1.60e-07 132_[+1(3.32e-07)]_205_\ [+2(7.01e-07)]_34_[+3(2.44e-05)]_86 6104 7.70e-08 90_[+1(2.67e-06)]_345_\ [+3(1.65e-05)]_1_[+2(5.76e-08)]_21 7652 3.93e-06 112_[+3(3.62e-06)]_89_\ [+1(3.83e-08)]_271 8453 5.13e-04 24_[+1(2.47e-07)]_460 9367 1.26e-04 45_[+3(1.11e-05)]_133_\ [+1(4.47e-07)]_294 bd842 5.01e-08 41_[+1(7.23e-08)]_372_\ [+2(3.17e-07)]_14_[+3(7.01e-05)]_30 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because nmotifs = 3 reached. ******************************************************************************** CPU: seaotter.hsd1.wa.comcast.net ********************************************************************************