******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.10.0 (Release date: Wed May 21 10:35:36 2014 +1000) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net. This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme.nbcr.net. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= motifs/83/83.seqs.fa ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ 11208 1.0000 500 11905 1.0000 500 22292 1.0000 500 22472 1.0000 500 22554 1.0000 500 22767 1.0000 500 23036 1.0000 500 23247 1.0000 500 24649 1.0000 500 25735 1.0000 500 261479 1.0000 500 262283 1.0000 500 262729 1.0000 500 263436 1.0000 500 28795 1.0000 500 3520 1.0000 500 5262 1.0000 500 8858 1.0000 500 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme motifs/83/83.seqs.fa -oc motifs/83 -dna -minw 12 -maxw 21 -nmotifs 3 -maxsize 500000 model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 12 maxw= 21 minic= 0.00 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 18 wnsites= 0.8 theta: prob= 1 spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 9000 N= 18 strands: + sample: seed= 0 seqfrac= 1 Letter frequencies in dataset: A 0.261 C 0.241 G 0.235 T 0.264 Background letter frequencies (from dataset with add-one prior applied): A 0.261 C 0.241 G 0.235 T 0.264 ******************************************************************************** ******************************************************************************** MOTIF 1 MEME width = 12 sites = 18 llr = 171 E-value = 3.9e-003 ******************************************************************************** -------------------------------------------------------------------------------- Motif 1 Description -------------------------------------------------------------------------------- Simplified A 18827637719a pos.-specific C 7128:472191: probability G 1:::3::2:::: matrix T 111:::1:2::: bits 2.1 1.9 * 1.7 * 1.5 *** Relative 1.3 * *** Entropy 1.0 ***** *** (13.7 bits) 0.8 ************ 0.6 ************ 0.4 ************ 0.2 ************ 0.0 ------------ Multilevel CAACAACAACAA consensus AGCA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------ 25735 471 7.26e-08 ACACCACCAC CAACAACAACAA CAACAACAAT 262283 32 1.09e-06 CCAACTTCCA CACCACCAACAA CATGCTAAGC 22292 383 1.09e-06 AGATCTCGCG CACCACCAACAA GGATCGTTGC 5262 221 2.20e-06 ACCAACTCTT CAACGCCGACAA TGGTACAACT 22472 378 4.42e-06 GCGTTCATTT CAACAACGTCAA CTTCCCGCTC 262729 201 5.88e-06 TGCTCTACTG CAACGACAACCA ACCAACGTCA 11905 360 5.88e-06 AACAGCAACT CAACGACAACCA TCATTCATCA 263436 488 8.30e-06 ACCAGCCAGT CAAAGCAAACAA T 22554 473 1.14e-05 ACCTCTCACT CAACAACCAAAA GAAGGTTCAC 261479 468 1.38e-05 GAACAGCTGA CAACAAAGTCAA ACCTTCTCGT 23036 487 1.93e-05 CACAAGCAAA ACACACCAACAA CC 24649 477 2.18e-05 TTCTCTGAGC CATCAACATCAA CATACTAACA 3520 404 2.58e-05 CAACACAACG GAAAACAAACAA AGGCACGATC 23247 455 4.80e-05 ATGGCCTCCA CTACAAACACAA TATCTTTCTC 8858 25 7.38e-05 GTGTTGATGG TACAACCAACAA GAGAGGTTAC 22767 397 9.47e-05 AACCCTTGAT CAACGCAACAAA CACTGCATGC 28795 266 1.23e-04 GAATTGACCG GAACAATACCAA CGGAGATTGG 11208 220 1.46e-04 TTAGGACGCT ACAAAACCACAA TTTTTCACAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 25735 7.3e-08 470_[+1]_18 262283 1.1e-06 31_[+1]_457 22292 1.1e-06 382_[+1]_106 5262 2.2e-06 220_[+1]_268 22472 4.4e-06 377_[+1]_111 262729 5.9e-06 200_[+1]_288 11905 5.9e-06 359_[+1]_129 263436 8.3e-06 487_[+1]_1 22554 1.1e-05 472_[+1]_16 261479 1.4e-05 467_[+1]_21 23036 1.9e-05 486_[+1]_2 24649 2.2e-05 476_[+1]_12 3520 2.6e-05 403_[+1]_85 23247 4.8e-05 454_[+1]_34 8858 7.4e-05 24_[+1]_464 22767 9.5e-05 396_[+1]_92 28795 0.00012 265_[+1]_223 11208 0.00015 219_[+1]_269 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 1 width=12 seqs=18 25735 ( 471) CAACAACAACAA 1 262283 ( 32) CACCACCAACAA 1 22292 ( 383) CACCACCAACAA 1 5262 ( 221) CAACGCCGACAA 1 22472 ( 378) CAACAACGTCAA 1 262729 ( 201) CAACGACAACCA 1 11905 ( 360) CAACGACAACCA 1 263436 ( 488) CAAAGCAAACAA 1 22554 ( 473) CAACAACCAAAA 1 261479 ( 468) CAACAAAGTCAA 1 23036 ( 487) ACACACCAACAA 1 24649 ( 477) CATCAACATCAA 1 3520 ( 404) GAAAACAAACAA 1 23247 ( 455) CTACAAACACAA 1 8858 ( 25) TACAACCAACAA 1 22767 ( 397) CAACGCAACAAA 1 28795 ( 266) GAACAATACCAA 1 11208 ( 220) ACAAAACCACAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 8802 bayes= 9.0653 E= 3.9e-003 -123 159 -108 -224 168 -111 -1081 -224 158 -53 -1081 -224 -23 169 -1081 -1081 147 -1081 24 -1081 109 89 -1081 -1081 9 147 -1081 -224 135 -53 -50 -1081 147 -111 -1081 -66 -123 189 -1081 -1081 177 -111 -1081 -1081 194 -1081 -1081 -1081 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 18 E= 3.9e-003 0.111111 0.722222 0.111111 0.055556 0.833333 0.111111 0.000000 0.055556 0.777778 0.166667 0.000000 0.055556 0.222222 0.777778 0.000000 0.000000 0.722222 0.000000 0.277778 0.000000 0.555556 0.444444 0.000000 0.000000 0.277778 0.666667 0.000000 0.055556 0.666667 0.166667 0.166667 0.000000 0.722222 0.111111 0.000000 0.166667 0.111111 0.888889 0.000000 0.000000 0.888889 0.111111 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 regular expression -------------------------------------------------------------------------------- CAA[CA][AG][AC][CA]AACAA -------------------------------------------------------------------------------- Time 3.00 secs. ******************************************************************************** ******************************************************************************** MOTIF 2 MEME width = 16 sites = 18 llr = 178 E-value = 6.3e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif 2 Description -------------------------------------------------------------------------------- Simplified A :1::1::1:::12:21 pos.-specific C 51::43:26:253373 probability G 5:1912a:28112622 matrix T :89145:7227441:5 bits 2.1 * 1.9 * 1.7 * * 1.5 ** * * Relative 1.3 ** * * Entropy 1.0 **** * * (14.3 bits) 0.8 **** ** ** ** 0.6 **** ***** ** 0.4 **** ******* ** 0.2 ************ *** 0.0 ---------------- Multilevel CTTGCTGTCGTCTGCT consensus G TC T TCC C sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ---------------- 24649 126 2.41e-08 CTATCCTAAG CTTGGTGTCGTCTGCT GAGGGAGAGA 5262 295 4.38e-07 TGTTAAAGTT GCTGCCGTCGTCCGCT CTCTTTCGTT 3520 297 9.73e-07 TCCCCTGTTT CCTGCCGTCGTCCGCC CGTGGACTTG 262729 477 2.27e-06 TGTTTTTGGT GTTGCTGTGGGTTGCC TCGTGAGG 22292 400 4.87e-06 AACAAGGATC GTTGCTGCCGTTGCGT CAAGTTGCGT 11208 398 6.59e-06 AATGACGGGC GTTGTTGTCGTACCAT TCCACTGTCC 261479 239 8.80e-06 ACTAGACGCT CTGGCCGTCGTCACCG GCGGTCGTCG 11905 280 9.66e-06 TGCTACAAGA CTTGATGTGTTTTGCC GCGAGAAAGC 22767 55 1.27e-05 CTAGGAGAAG CTTGCTGCTGCCCGAT CGTCAGGCAC 262283 153 1.39e-05 CGCAGGATCG CTGGCGGACGTCTGCG ATCTCAACAT 22554 94 1.39e-05 ACGTCTGCGG GTTGTCGACGCTTGGT GGTGCCGTTG 23247 237 1.52e-05 CGAAGGAATT CTTGGTGTTTCCCGCT TCTACCACGT 22472 146 1.52e-05 GTTGTCGATT GTTGTGGCTGTTGCCC TGCACGCCTG 8858 152 1.80e-05 CGTCTTATGG GTTGTTGTCGGCATGT TATGATGGAG 25735 24 2.31e-05 GCTTCGTTAC GTTGATGTGGTGTCCC GACGAGCCGA 263436 148 4.27e-05 AAAGTCAAAT GATGTGGTCGTTAGCA ATGCTGACTT 23036 91 4.59e-05 ACTTCTTGAG CTTTTGGTTGTCTTCG AAGAAGTCAG 28795 117 5.28e-05 ACGCCTACTT CTTTTCGTCTTTGGAT GAAGAGGTGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 24649 2.4e-08 125_[+2]_359 5262 4.4e-07 294_[+2]_190 3520 9.7e-07 296_[+2]_188 262729 2.3e-06 476_[+2]_8 22292 4.9e-06 399_[+2]_85 11208 6.6e-06 397_[+2]_87 261479 8.8e-06 238_[+2]_246 11905 9.7e-06 279_[+2]_205 22767 1.3e-05 54_[+2]_430 262283 1.4e-05 152_[+2]_332 22554 1.4e-05 93_[+2]_391 23247 1.5e-05 236_[+2]_248 22472 1.5e-05 145_[+2]_339 8858 1.8e-05 151_[+2]_333 25735 2.3e-05 23_[+2]_461 263436 4.3e-05 147_[+2]_337 23036 4.6e-05 90_[+2]_394 28795 5.3e-05 116_[+2]_368 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 2 width=16 seqs=18 24649 ( 126) CTTGGTGTCGTCTGCT 1 5262 ( 295) GCTGCCGTCGTCCGCT 1 3520 ( 297) CCTGCCGTCGTCCGCC 1 262729 ( 477) GTTGCTGTGGGTTGCC 1 22292 ( 400) GTTGCTGCCGTTGCGT 1 11208 ( 398) GTTGTTGTCGTACCAT 1 261479 ( 239) CTGGCCGTCGTCACCG 1 11905 ( 280) CTTGATGTGTTTTGCC 1 22767 ( 55) CTTGCTGCTGCCCGAT 1 262283 ( 153) CTGGCGGACGTCTGCG 1 22554 ( 94) GTTGTCGACGCTTGGT 1 23247 ( 237) CTTGGTGTTTCCCGCT 1 22472 ( 146) GTTGTGGCTGTTGCCC 1 8858 ( 152) GTTGTTGTCGGCATGT 1 25735 ( 24) GTTGATGTGGTGTCCC 1 263436 ( 148) GATGTGGTCGTTAGCA 1 23036 ( 91) CTTTTGGTTGTCTTCG 1 28795 ( 117) CTTTTCGTCTTTGGAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 8730 bayes= 9.05343 E= 6.3e+000 -1081 106 109 -1081 -223 -111 -1081 166 -1081 -1081 -108 175 -1081 -1081 192 -125 -123 69 -108 56 -1081 21 -8 92 -1081 -1081 209 -1081 -123 -53 -1081 145 -1081 134 -50 -25 -1081 -1081 183 -66 -1081 -53 -108 145 -223 106 -208 56 -65 21 -50 56 -1081 21 138 -125 -65 147 -50 -1081 -223 21 -50 92 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 18 E= 6.3e+000 0.000000 0.500000 0.500000 0.000000 0.055556 0.111111 0.000000 0.833333 0.000000 0.000000 0.111111 0.888889 0.000000 0.000000 0.888889 0.111111 0.111111 0.388889 0.111111 0.388889 0.000000 0.277778 0.222222 0.500000 0.000000 0.000000 1.000000 0.000000 0.111111 0.166667 0.000000 0.722222 0.000000 0.611111 0.166667 0.222222 0.000000 0.000000 0.833333 0.166667 0.000000 0.166667 0.111111 0.722222 0.055556 0.500000 0.055556 0.388889 0.166667 0.277778 0.166667 0.388889 0.000000 0.277778 0.611111 0.111111 0.166667 0.666667 0.166667 0.000000 0.055556 0.277778 0.166667 0.500000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 regular expression -------------------------------------------------------------------------------- [CG]TTG[CT][TCG]GT[CT]GT[CT][TC][GC]C[TC] -------------------------------------------------------------------------------- Time 6.04 secs. ******************************************************************************** ******************************************************************************** MOTIF 3 MEME width = 12 sites = 18 llr = 159 E-value = 1.4e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif 3 Description -------------------------------------------------------------------------------- Simplified A 42a31a:47::6 pos.-specific C :::11:711213 probability G 58:49:33179: matrix T 1::2::1222:2 bits 2.1 1.9 * * * 1.7 * * * 1.5 ** ** * Relative 1.3 ** ** * Entropy 1.0 ** ** * (12.7 bits) 0.8 *** *** ** 0.6 *** *** **** 0.4 *** *** **** 0.2 ************ 0.0 ------------ Multilevel GGAGGACAAGGA consensus A A GG C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- ------------ 22292 282 9.34e-08 GCTGTGAGGA GGAGGACGAGGA GCAAAATGCG 22767 39 6.34e-06 TCTAATCTTC AGATGACTAGGA GAAGCTTGCT 11208 39 6.92e-06 CGGCGGCAGT GGAGGAGAATGA ATGGTGGAGG 262729 426 8.75e-06 ATGCAGGATG AAAAGACGAGGA AGATGATCCA 5262 84 1.11e-05 CTTGCCGTCT GGAGGAGGCGGA TTTGGCCTTG 22472 2 1.11e-05 A GGATGACACGGA ATGGACTGCG 261479 109 1.24e-05 TACTTTATGG AGAGGACCAGGC GACCTAAGGT 24649 149 1.70e-05 GCTGAGGGAG AGACGACGAGGC ACCAATGGAT 25735 310 2.06e-05 TCCTCTGTAC AAAAGAGAAGGA CCTTTCAATG 262283 331 2.28e-05 TCGGATTACC AGAAGACAATGT AAGTTGTGTG 3520 57 3.89e-05 TCATATTGCC GGAGGAGTTGGC TGGTTCATTA 22554 314 4.25e-05 GGTGAGGGTA GGAAGACGAGCC ACGCCTGAGC 11905 159 5.44e-05 AGCGATGAGA GGAGAACAACGA TGTGTTCTCG 263436 101 6.91e-05 TTGAAGTCAG GGAAGATGACGA GTGACTGGAT 28795 218 9.99e-05 GGATTTAGCA AGATGACAGGGT TGAAGGCATT 23036 136 1.41e-04 ATCAAATCAG AGAGGACTTTGT TCGTCAGAGT 8858 367 1.60e-04 CACGAGAGAC TGAAGAGATGGC TCGGCATACA 23247 360 2.05e-04 TTTTTTGAAC GAAGCACAACGA AGCAACTTCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 22292 9.3e-08 281_[+3]_207 22767 6.3e-06 38_[+3]_450 11208 6.9e-06 38_[+3]_450 262729 8.7e-06 425_[+3]_63 5262 1.1e-05 83_[+3]_405 22472 1.1e-05 1_[+3]_487 261479 1.2e-05 108_[+3]_380 24649 1.7e-05 148_[+3]_340 25735 2.1e-05 309_[+3]_179 262283 2.3e-05 330_[+3]_158 3520 3.9e-05 56_[+3]_432 22554 4.2e-05 313_[+3]_175 11905 5.4e-05 158_[+3]_330 263436 6.9e-05 100_[+3]_388 28795 0.0001 217_[+3]_271 23036 0.00014 135_[+3]_353 8858 0.00016 366_[+3]_122 23247 0.00021 359_[+3]_129 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 3 width=12 seqs=18 22292 ( 282) GGAGGACGAGGA 1 22767 ( 39) AGATGACTAGGA 1 11208 ( 39) GGAGGAGAATGA 1 262729 ( 426) AAAAGACGAGGA 1 5262 ( 84) GGAGGAGGCGGA 1 22472 ( 2) GGATGACACGGA 1 261479 ( 109) AGAGGACCAGGC 1 24649 ( 149) AGACGACGAGGC 1 25735 ( 310) AAAAGAGAAGGA 1 262283 ( 331) AGAAGACAATGT 1 3520 ( 57) GGAGGAGTTGGC 1 22554 ( 314) GGAAGACGAGCC 1 11905 ( 159) GGAGAACAACGA 1 263436 ( 101) GGAAGATGACGA 1 28795 ( 218) AGATGACAGGGT 1 23036 ( 136) AGAGGACTTTGT 1 8858 ( 367) TGAAGAGATGGC 1 23247 ( 360) GAAGCACAACGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 8802 bayes= 9.0653 E= 1.4e+001 77 -1081 109 -224 -65 -1081 183 -1081 194 -1081 -1081 -1081 35 -211 92 -66 -223 -211 192 -1081 194 -1081 -1081 -1081 -1081 147 24 -224 77 -211 50 -66 135 -111 -208 -66 -1081 -53 150 -66 -1081 -211 201 -1081 109 21 -1081 -66 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 18 E= 1.4e+001 0.444444 0.000000 0.500000 0.055556 0.166667 0.000000 0.833333 0.000000 1.000000 0.000000 0.000000 0.000000 0.333333 0.055556 0.444444 0.166667 0.055556 0.055556 0.888889 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.666667 0.277778 0.055556 0.444444 0.055556 0.333333 0.166667 0.666667 0.111111 0.055556 0.166667 0.000000 0.166667 0.666667 0.166667 0.000000 0.055556 0.944444 0.000000 0.555556 0.277778 0.000000 0.166667 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 regular expression -------------------------------------------------------------------------------- [GA]GA[GA]GA[CG][AG]AGG[AC] -------------------------------------------------------------------------------- Time 8.64 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- 11208 8.52e-05 38_[+3(6.92e-06)]_347_\ [+2(6.59e-06)]_87 11905 4.45e-05 158_[+3(5.44e-05)]_109_\ [+2(9.66e-06)]_64_[+1(5.88e-06)]_129 22292 1.74e-08 211_[+2(7.89e-05)]_54_\ [+3(9.34e-08)]_89_[+1(1.09e-06)]_5_[+2(4.87e-06)]_85 22472 1.28e-05 1_[+3(1.11e-05)]_26_[+2(4.92e-05)]_\ 90_[+2(1.52e-05)]_216_[+1(4.42e-06)]_111 22554 8.75e-05 93_[+2(1.39e-05)]_15_[+2(7.39e-05)]_\ 173_[+3(4.25e-05)]_147_[+1(1.14e-05)]_16 22767 9.68e-05 38_[+3(6.34e-06)]_4_[+2(1.27e-05)]_\ 326_[+1(9.47e-05)]_92 23036 1.03e-03 90_[+2(4.59e-05)]_380_\ [+1(1.93e-05)]_2 23247 1.18e-03 236_[+2(1.52e-05)]_202_\ [+1(4.80e-05)]_34 24649 2.43e-07 125_[+2(2.41e-08)]_7_[+3(1.70e-05)]_\ 316_[+1(2.18e-05)]_12 25735 8.24e-07 23_[+2(2.31e-05)]_195_\ [+1(9.64e-07)]_63_[+3(2.06e-05)]_149_[+1(7.26e-08)]_18 261479 2.38e-05 108_[+3(1.24e-05)]_118_\ [+2(8.80e-06)]_[+2(6.48e-05)]_197_[+1(1.38e-05)]_21 262283 6.49e-06 31_[+1(1.09e-06)]_109_\ [+2(1.39e-05)]_162_[+3(2.28e-05)]_158 262729 2.47e-06 200_[+1(5.88e-06)]_213_\ [+3(8.75e-06)]_39_[+2(2.27e-06)]_8 263436 2.64e-04 100_[+3(6.91e-05)]_35_\ [+2(4.27e-05)]_324_[+1(8.30e-06)]_1 28795 3.95e-03 116_[+2(5.28e-05)]_85_\ [+3(9.99e-05)]_271 3520 1.62e-05 56_[+3(3.89e-05)]_228_\ [+2(9.73e-07)]_6_[+2(6.06e-05)]_69_[+1(2.58e-05)]_85 5262 2.87e-07 83_[+3(1.11e-05)]_6_[+2(6.92e-05)]_\ 103_[+1(2.20e-06)]_62_[+2(4.38e-07)]_24_[+2(1.65e-05)]_150 8858 1.59e-03 24_[+1(7.38e-05)]_115_\ [+2(1.80e-05)]_333 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because nmotifs = 3 reached. ******************************************************************************** CPU: seaotter.hsd1.wa.comcast.net ********************************************************************************