PHATRDRAFT_19552 matrix attachment region binding protein (SIK1)
Phaeodactylum tricornutum

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_19552 chr_6 matrix attachment region binding protein (SIK1) 19871 21615 -
NCBI ID Ensembl Genomes exon ID
Not available Not available
Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0243
Normalized Mean Residue
Phatr_bicluster_0102
0.21
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Nop superfamily Putative snoRNA binding domain; This family consists of various Pre RNA processing... - 242.578 1.68E-77 264 - 416 superfamily 250875
Nop superfamily Putative snoRNA binding domain; This family consists of various Pre RNA processing... - 242.578 1.68E-77 264 - 416 superfamily 250875
NOSIC NOSIC (NUC001) domain; This is the central domain in Nop56/SIK1-like proteins. cl06890 91.0328 1.63E-22 172 - 223 specific 254604
NOSIC superfamily NOSIC (NUC001) domain; This is the central domain in Nop56/SIK1-like proteins. - 91.0328 1.63E-22 172 - 223 superfamily 263088
NOP5NT superfamily NOP5NT (NUC127) domain; This N terminal domain is found in RNA-binding proteins of the NOP5 family. - 84.1483 7.54E-20 1 - 69 superfamily 254636
NOP5NT superfamily NOP5NT (NUC127) domain; This N terminal domain is found in RNA-binding proteins of the NOP5 family. - 84.1483 7.54E-20 1 - 69 superfamily 254636
SIK1 Protein implicated in ribosomal biogenesis, Nop56p homolog [Translation, ribosomal structure and... - 380.977 1.58E-127 45 - 416 multi-dom 224415
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
22635 Not available 273707 197895 75659 Cre10.g441400.t1.2 AT5G27120.1 246404
KEGG description KEGG Pathway
Not available Not available
Not available -
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