PHATRDRAFT_27821 dead (asp-glu-ala-asp) box polypeptide 21 (DEADc)
Phaeodactylum tricornutum

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_27821 chr_9 dead (asp-glu-ala-asp) box polypeptide 21 (DEADc) 848794 851352 -
NCBI ID Ensembl Genomes exon ID
Not available Not available
Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0226
Normalized Mean Residue
Phatr_bicluster_0123
0.20
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DEADc DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in... cl17251 233.916 3.45E-71 141 - 353 specific 238167
DEXDc superfamily DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... - 233.916 3.45E-71 141 - 353 superfamily 266587
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 126.584 1.38E-33 432 - 538 superfamily 238034
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 126.584 1.38E-33 432 - 538 superfamily 238034
GUCT_Hera RNA-binding GUCT-like domain found in Thermus thermophilus heat resistant RNA-dependent ATPase (... cl06960 70.79 9.31E-15 627 - 707 specific 240595
GUCT superfamily RNA-binding GUCT domain found in the RNA helicase II/Gu protein family; This family includes... - 70.79 9.31E-15 627 - 707 superfamily 263113
DEXDc DEAD-like helicases superfamily; DEAD-like helicases superfamily. - 151.105 1.60E-41 152 - 359 multi-dom 214692
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
13254 Not available 138392 297895 443976 Cre17.g727700.t1.1 AT5G26742.1 326516
KEGG description KEGG Pathway
Not available Not available
Not available -
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