PHATRDRAFT_28568 snf2 domain-containing protein helicase domain-containing protein ring finger domain-containing protein (SNF2_N)
Phaeodactylum tricornutum

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_28568 chr_12 snf2 domain-containing protein helicase domain-containing protein ring finger domain-containing... 827225 830217 -
NCBI ID Ensembl Genomes exon ID
Not available Not available
Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0233
Normalized Mean Residue
Phatr_bicluster_0179
0.41
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 88.834 1.58E-20 527 - 653 superfamily 238034
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 88.834 1.58E-20 527 - 653 superfamily 238034
RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60... cl17238 40.5068 0.000106531 443 - 490 specific 238093
RING superfamily RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60... - 40.5068 0.000106531 443 - 490 superfamily 266579
DEXDc DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... cl17251 38.0872 0.00173978 49 - 112 specific 238005
DEXDc superfamily DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... - 38.0872 0.00173978 49 - 112 superfamily 266587
DEXDc DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... cl17251 38.0872 0.00173978 49 - 112 specific 238005
DEXDc superfamily DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... - 38.0872 0.00173978 49 - 112 superfamily 266587
SNF2_N SNF2 family N-terminal domain; This domain is found in proteins involved in a variety of processes... - 161.686 9.26E-45 1 - 419 multi-dom 249654
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
268889 Not available 209064 186386 467421 Cre11.g479300.t1.1 AT1G05120.1 566639
KEGG description KEGG Pathway
Not available Not available
Not available -
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