PHATRDRAFT_33660 40s ribosomal protein (PTZ00084)
Phaeodactylum tricornutum

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_33660 chr_4 40s ribosomal protein (PTZ00084) 35370 38672 +
NCBI ID Ensembl Genomes exon ID
Not available Not available
Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0150
Normalized Mean Residue
Phatr_bicluster_0210
0.20
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
40S_S3_KH K homology RNA-binding (KH) domain of the eukaryotic 40S small ribosomal subunit protein S3. S3 is... cl00098 148.91 1.95E-45 11 - 91 specific 239096
KH-II superfamily KH-II (K homology RNA-binding domain, type II). KH binds single-stranded RNA or DNA. It is found... - 148.91 1.95E-45 11 - 91 superfamily 260189
Ribosomal_S3_C superfamily Ribosomal protein S3, C-terminal domain; This family contains a central domain pfam00013, hence the... - 77.5474 1.61E-18 100 - 184 superfamily 249666
Ribosomal_S3_C superfamily Ribosomal protein S3, C-terminal domain; This family contains a central domain pfam00013, hence the... - 77.5474 1.61E-18 100 - 184 superfamily 249666
PTZ00084 40S ribosomal protein S3; Provisional - 379.393 1.08E-133 1 - 213 multi-dom 240260
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
28049 Not available 272269 200128 415280 Cre02.g102250.t1.2 AT3G53870.1 287105
KEGG description KEGG Pathway
Not available Not available
Not available -
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