PHATRDRAFT_9855 rna polymerase sigma-70 factor (Sig70-cyanoRpoD)
Phaeodactylum tricornutum

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_9855 chr_2 rna polymerase sigma-70 factor (Sig70-cyanoRpoD) 1123083 1124159 -
NCBI ID Ensembl Genomes exon ID
Not available Not available
Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0404
Normalized Mean Residue
Phatr_bicluster_0231
0.29
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Sigma70_r2 superfamily Sigma-70 region 2; Region 2 of sigma-70 is the most conserved region of the entire protein. All... - 62.2085 1.58E-12 104 - 170 superfamily 252661
Sigma70_r2 superfamily Sigma-70 region 2; Region 2 of sigma-70 is the most conserved region of the entire protein. All... - 62.2085 1.58E-12 104 - 170 superfamily 252661
Sigma70_r3 superfamily Sigma-70 region 3; Region 3 forms a discrete compact three helical domain within the sigma-factor.... - 34.8832 0.00469641 187 - 259 superfamily 146934
Sig70-cyanoRpoD RNA polymerase sigma factor, cyanobacterial RpoD-like family; This family includes a number of... - 186.298 7.96E-56 25 - 344 multi-dom 234082
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
40966 Not available 276710 236311 Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
Not available -
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