10099 HMGB-UBF_HMG-box
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
10099 chr_15 HMGB-UBF_HMG-box 267536 268658 - HMGB-UBF_HMG-box
NCBI ID Ensembl Genomes exon ID
7444310 Thaps10099.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0349
Normalized Mean Residue
Thaps_bicluster_0074
0.37
hypothetical protein
0.8119
(bd799) ZnMc_pappalysin_like
0.7287
(bd650) NA
0.7154
hypothetical protein
0.713
hypothetical protein
0.713
(bd759) NA
0.6875
(bd887) NA
0.6856
(bd816) NA
0.6721
0.6691
(bd1076) NA
0.6555
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HMGB-UBF_HMG-box HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins.... cl00082 59.5637 1.61E-11 62 - 147 specific 238686
HMG-box superfamily High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and... - 59.5637 1.61E-11 62 - 147 superfamily 260179
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003677 GO:0006355 -

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP
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