10818 tRNA_bindingDomain superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
10818	chr_18	tRNA_bindingDomain superfamily	209142	209985	+	tRNA_bindingDomain superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442941	Thaps10818.2, Thaps10818.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0208

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0281	0.33	5600 4000

Most Highly Correlated Transcripts

7641 metallo-dependent_hydrolases superfamily 0.8971	6693 hypothetical protein 0.8916	5958 hypothetical protein 0.8845	263006 P4Hc 0.8825	3354 hypothetical protein 0.8815	1911 hypothetical protein 0.8811
4722 hypothetical protein 0.8742	8065 hypothetical protein 0.8726	4292 hypothetical protein 0.8721	262271 PIP5K 0.8706

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
tRNA_bindingDomain superfamily		The tRNA binding domain is also known as the Myf domain in literature. This domain is found in a...	-	63.6814	1.45E-13	24 - 156	superfamily	260352

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	269564	310912	219269	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0000049 -

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