11034 prfC
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
11034 chr_18 prfC 753314 755334 - prfC
NCBI ID Ensembl Genomes exon ID
7444835 Thaps11034.2, Thaps11034.3, Thaps11034.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0297
TRX_reduct
0.8945
HCO3_cotransp superfamily
0.8841
hypothetical protein
0.8707
NA
0.8696
PRK05279
0.8638
TIM_phosphate_binding superfamily
0.8634
LplA
0.858
hypothetical protein
0.8561
hypothetical protein
0.8543
SAICAR_synt_Sc
0.8513
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RF3_II RF3_II: this subfamily represents the domain II of bacterial Release Factor 3 (RF3). Termination of... cl02787 147.795 1.85E-42 373 - 459 specific 239660
Translation_Factor_II_like superfamily Translation_Factor_II_like: Elongation factor Tu (EF-Tu) domain II-like proteins. Elongation factor... - 147.795 1.85E-42 373 - 459 superfamily 261449
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 409.679 1.90E-139 64 - 332 superfamily 266525
prfC peptide chain release factor 3; Provisional - 713.83 0 61 - 607 multi-dom 179105
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_27956 PHATRDRAFT_27956 226600 10641 61223 Cre01.g006150.t1.1 Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0005525 GO:0006412 GO:0005737 GO:0006415 GO:0016149 GO:0003924 GO:0008547 -

GTP binding

Details: 
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO Category: 
MF

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP

cytoplasm

Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO Category: 
CC

translational termination

Details: 
The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code).
GO Category: 
BP

translation release factor activity, codon specific

Details: 
A translation release factor that is specific for one or more particular termination codons; acts at the ribosomal A-site and require polypeptidyl-tRNA at the P-site.
GO Category: 
MF

GTPase activity

Details: 
Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO Category: 
MF

NA

Details: 
NA
GO Category: 
NA
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