11342 RNA_pol_Rpc4 superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
11342 chr_19c_29 RNA_pol_Rpc4 superfamily 86916 88470 + RNA_pol_Rpc4 superfamily
NCBI ID Ensembl Genomes exon ID
7451874 Thaps11342.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0242
Normalized Mean Residue
Thaps_bicluster_0229
0.40
hypothetical protein
0.9147
hypothetical protein
0.9046
PRK00142
0.9022
SrmB
0.8966
hypothetical protein
0.8909
hypothetical protein
0.8907
MogA_MoaB
0.8902
PLN02724
0.8851
PLN03238
0.8827
EngA2
0.8826
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RNA_pol_Rpc4 superfamily RNA polymerase III RPC4; Specific subunit for Pol III, the tRNA specific polymerase. - 72.7087 2.98E-15 362 - 510 superfamily 253030
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 244634 295061 Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003677 GO:0003899 GO:0006350 GO:0006399 -

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

DNA-directed RNA polymerase activity

Details: 
Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.
GO Category: 
MF

NA

Details: 
NA
GO Category: 
NA

tRNA metabolic process

Details: 
The chemical reactions and pathways involving tRNA, transfer RNA, a class of relatively small RNA molecules responsible for mediating the insertion of amino acids into the sequence of nascent polypeptide chains during protein synthesis. Transfer RNA is characterized by the presence of many unusual minor bases, the function of which has not been completely established.
GO Category: 
BP
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