1456 (IDH1) IDH superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1456 chr_1 (IDH1) IDH superfamily 1563405 1565782 + IDH superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0205

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0240
 0.25

Most Highly Correlated Transcripts

267987

(CYS2) CBS_like
0.9408

25116

(PGK5) Phosphoglycerate_kinase
0.9378

8524

pntA
0.9231

22860

hypothetical protein
0.9203

bd1893

(bd1893) NA
0.9178

11615

PRK15061
0.9053

bd790

(bd790) ABCC_MRP_domain2
0.8937

21978

hypothetical protein
0.8898

9467

hypothetical protein
0.8885

10366

hypothetical protein
0.8858

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
IDH superfamily Monomeric isocitrate dehydrogenase; NADP(+)-dependent isocitrate dehydrogenase (ICD) is an... - 1040.13 0 5 - 662 superfamily 265683

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45017 PHATRDRAFT_45017 277597 209227 450594 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004450 GO:0006099 -

GO:0004450

isocitrate dehydrogenase (NADP+) activity

Details: 
Catalysis of the reaction: isocitrate + NADP+ = 2-oxoglutarate + CO2 + NADPH + H+.
GO Category: 
MF

GO:0006099

tricarboxylic acid cycle

Details: 
A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.
GO Category: 
BP

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