14727 COG4770
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
14727 chr_8 COG4770 140022 143208 + COG4770
NCBI ID Ensembl Genomes exon ID
7452412 Thaps14727.3, Thaps14727.2, Thaps14727.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0405
Normalized Mean Residue
Thaps_bicluster_0055
0.46
S_TKc
0.9058
CobN-Mg_chel superfamily
0.9028
hypothetical protein
0.8851
Transglut_core
0.8835
PUB
0.8832
Cas1_AcylT superfamily
0.8824
hypothetical protein
0.8808
hypothetical protein
0.8783
hypothetical protein
0.8782
Adaptin_N
0.8766
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
biotinyl_domain The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-... cl11404 82.0787 1.42E-18 535 - 601 specific 133459
Biotinyl_lipoyl_domains superfamily Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the... - 82.0787 1.42E-18 535 - 601 superfamily 264355
ATP-grasp_4 superfamily ATP-grasp domain; This family includes a diverse set of enzymes that possess ATP-dependent... - 227.57 2.07E-68 165 - 380 superfamily 266590
CPSase_L_chain superfamily Carbamoyl-phosphate synthase L chain, N-terminal domain; Carbamoyl-phosphate synthase catalyses the... - 126.059 1.71E-33 52 - 159 superfamily 249744
CPSase_L_chain superfamily Carbamoyl-phosphate synthase L chain, N-terminal domain; Carbamoyl-phosphate synthase catalyses the... - 126.059 1.71E-33 52 - 159 superfamily 249744
Biotin_carb_C superfamily Biotin carboxylase C-terminal domain; Biotin carboxylase is a component of the acetyl-CoA... - 101.01 9.09E-25 395 - 501 superfamily 263607
COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism] - 467.154 7.68E-152 53 - 603 multi-dom 227111
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0005524 GO:0008152 GO:0016874 GO:0004086 GO:0004485 -

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

ligase activity

Details: 
Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
GO Category: 
MF

NA

Details: 
NA
GO Category: 
NA

methylcrotonoyl-CoA carboxylase activity

Details: 
Catalysis of the reaction: 3-methylbut-2-enoyl-CoA + ATP + bicarbonate = trans-3-methylglutaconyl-CoA + ADP + 2 H(+) + phosphate.
GO Category: 
MF
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