1620 S2P-M50 superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
1620 chr_1 S2P-M50 superfamily 2002124 2004416 + S2P-M50 superfamily
NCBI ID Ensembl Genomes exon ID
7443162 Thaps1620.1, Thaps1620.2, Thaps1620.3
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0054
(bd1765) NA
0.9399
(bd1078) NA
0.9189
(bd218) Chloroa_b-bind superfamily
0.9105
(bd672) NA
0.9091
(bd624) Glyco_transf_34 superfamily
0.9052
(bd1160) Chloroa_b-bind superfamily
0.9032
(bd1820) Fasciclin
0.9028
Sec1
0.9003
(bd1766) NA
0.8972
ERG4_ERG24 superfamily
0.895
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
S2P-M50 superfamily Site-2 protease (S2P) class of zinc metalloproteases (MEROPS family M50) cleaves transmembrane... - 76.1146 8.64E-16 476 - 676 superfamily 245232
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 228517 Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0004222 GO:0006508 -

metalloendopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP
Log in to post comments