16440 (RP3A) RNAP_RPB11_RPB3 superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
16440 chr_3 (RP3A) RNAP_RPB11_RPB3 superfamily 2400203 2401410 - RNAP_RPB11_RPB3 superfamily
NCBI ID Ensembl Genomes exon ID
7443844 Thaps16440.3, Thaps16440.1, Thaps16440.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0453
Normalized Mean Residue
Thaps_bicluster_0096
0.39
SAICAR_synt_Sc
0.9303
GRX_PICOT_like
0.915
HCO3_cotransp superfamily
0.8869
hypothetical protein
0.878
PLN02948
0.8693
Aldolase_II superfamily
0.8651
hypothetical protein
0.8592
TRX_reduct
0.8588
FeThRed_B
0.8567
0.8508
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RNAP_RPB11_RPB3 superfamily RPB11 and RPB3 subunits of RNA polymerase; The eukaryotic RPB11 and RPB3 subunits of RNA polymerase... - 284.111 1.01E-94 7 - 309 superfamily 264356
PRK00783 DNA-directed RNA polymerase subunit D; Provisional - 220.912 3.34E-70 7 - 309 multi-dom 234837
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_13566 PHATRDRAFT_13566 267685 312302 197736 Cre10.g419750.t1.2 AT2G15430.1 554134
KEGG description KEGG Pathway
RNA polymerase map03020
GO:0003899 GO:0006350 GO:0046983 GO:0003900 GO:0003901 GO:0003902 -

DNA-directed RNA polymerase activity

Details: 
Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.
GO Category: 
MF

NA

Details: 
NA
GO Category: 
NA

protein dimerization activity

Details: 
The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
GO Category: 
MF

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA
Log in to post comments