2092 (MYB13) Thioredoxin_like superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
2092	chr_2	(MYB13) Thioredoxin_like superfamily	143720	145127	-	Thioredoxin_like superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452167	Thaps2092.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0438

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0219	0.41	1.2 7700

Most Highly Correlated Transcripts

270222 0.9368	16295 FBPase 0.9006	34043 PKc_like superfamily 0.8798	25350 Methyltransf_24 0.8769	23170 hypothetical protein 0.8693	36995 LplA 0.8689
22782 hypothetical protein 0.862	7617 hypothetical protein 0.861	23481 hypothetical protein 0.8595	262644 hypothetical protein 0.8582

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Thioredoxin_like superfamily		Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX...	-	124.705	4.49E-34	314 - 448	superfamily	260398

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	196486	136838	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0003677 GO:0005634 GO:0005489 GO:0006118 -

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