21129 UBCc
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
21129 chr_2 UBCc 277410 278745 - UBCc
NCBI ID Ensembl Genomes exon ID
7442212 Thaps21129.1, Thaps21129.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0217
(ARF3) Arf1_5_like
0.9175
Trypsin_2
0.9142
GalK
0.9119
GRX_PICOT_like
0.9118
0.9031
hypothetical protein
0.9024
hypothetical protein
0.8967
P4Hc
0.8964
hypothetical protein
0.8961
EMP24_GP25L
0.895
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UBCc Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated... cl00154 142.726 1.18E-42 79 - 212 specific 238117
UBCc superfamily Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated... - 142.726 1.18E-42 79 - 212 superfamily 260221
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48810 PHATRDRAFT_48810 182557 307135 416101 Cre08.g370850.t1.1 AT4G36800.2 353725
KEGG description KEGG Pathway
Ubiquitin mediated proteolysis map04120
GO:0004840 GO:0006464 GO:0006512 GO:0004842 -

NA

Details: 
NA
GO Category: 
NA

cellular protein modification process

Details: 
The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
GO Category: 
BP

NA

Details: 
NA
GO Category: 
NA

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF
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