21308 RING
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
21308 chr_2 RING 1162088 1164574 + RING
NCBI ID Ensembl Genomes exon ID
7450380 Thaps21308.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0096
Normalized Mean Residue
Thaps_bicluster_0152
0.38
hypothetical protein
0.9171
Seipin superfamily
0.915
hypothetical protein
0.8937
(ALD3) ALDH_F3-13-14_CALDH-like
0.8898
ArfGap
0.8885
2A0109
0.8821
hypothetical protein
0.8821
(Tp_HSF_2.2e) HSF_DNA-bind superfamily
0.8812
hypothetical protein
0.88
DUF544 superfamily
0.8748
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60... cl17238 61.6928 8.22E-12 565 - 610 specific 238093
RING superfamily RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60... - 61.6928 8.22E-12 565 - 610 superfamily 266579
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_46043 PHATRDRAFT_46043 237556 Not available Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0000151 GO:0004842 GO:0008270 GO:0016567 -

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP
Log in to post comments