21811 UBCc
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
21811 chr_3 UBCc 1254065 1255349 - UBCc
NCBI ID Ensembl Genomes exon ID
7441900 Thaps21811.1, Thaps21811.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0218
RHOD superfamily
0.92
hypothetical protein
0.9182
hypothetical protein
0.9155
GRX_PICOT_like
0.9147
hypothetical protein
0.9146
cyclophilin_ABH_like
0.9097
hypothetical protein
0.9096
TRX_family
0.909
hypothetical protein
0.907
RRM_ist3_like
0.9065
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UBCc Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated... cl00154 170.461 2.46E-54 10 - 154 specific 238117
UBCc superfamily Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated... - 170.461 2.46E-54 10 - 154 superfamily 260221
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_27762 PHATRDRAFT_27762 269014 260432 471004 Cre02.g142000.t1.2 AT3G57870.1 511002
KEGG description KEGG Pathway
Ubiquitin mediated proteolysis map04120
GO:0004840 GO:0006464 GO:0006512 GO:0004842 -

NA

Details: 
NA
GO Category: 
NA

cellular protein modification process

Details: 
The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
GO Category: 
BP

NA

Details: 
NA
GO Category: 
NA

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF
Log in to post comments