22234 sensory_box
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
22234 chr_4 sensory_box 947737 949146 - sensory_box
NCBI ID Ensembl Genomes exon ID
7447931 Thaps22234.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0146
Normalized Mean Residue
Thaps_bicluster_0161
0.36
(bd1840) NA
0.9256
MDR1
0.9119
(bd1841) CAP10 superfamily
0.9118
(bd415) arom_aa_hydroxylase superfamily
0.8805
(bd1890) NA
0.8766
(bd885) NA
0.8538
hypothetical protein
0.8536
(bd1756) NA
0.8534
(GCD1) GCD
0.8508
COG1042
0.8481
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PAS superfamily PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising... - 68.4287 3.83E-14 303 - 406 superfamily 238075
PAS superfamily PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising... - 68.4287 3.83E-14 303 - 406 superfamily 238075
sensory_box PAS domain S-box; The PAS domain was previously described. This sensory box, or S-box domain... - 88.1078 4.86E-21 296 - 416 multi-dom 232884
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0004871 GO:0007165 GO:0000155 GO:0000160 -

signal transducer activity

Details: 
Conveys a signal across a cell to trigger a change in cell function or state. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response.
GO Category: 
MF

signal transduction

Details: 
The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
GO Category: 
BP

phosphorelay sensor kinase activity

Details: 
Catalysis of the phosphorylation of a histidine residue in response to detection of an extracellular signal such as a chemical ligand or change in environment, to initiate a change in cell state or activity. The two-component sensor is a histidine kinase that autophosphorylates a histidine residue in its active site. The phosphate is then transferred to an aspartate residue in a downstream response regulator, to trigger a response.
GO Category: 
MF

phosphorelay signal transduction system

Details: 
A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.
GO Category: 
BP
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