22372 HMGB-UBF_HMG-box
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
22372 chr_4 HMGB-UBF_HMG-box 1620198 1621306 - HMGB-UBF_HMG-box
NCBI ID Ensembl Genomes exon ID
7451905 Thaps22372.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0033
Normalized Mean Residue
Thaps_bicluster_0059
0.44
(bd388) COG3899
0.8703
(bd643) NA
0.8155
(bd737) NA
0.765
hypothetical protein
0.751
(bd943) NA
0.7481
(bd738) NA
0.7478
hypothetical protein
0.7476
(bd1801) NA
0.7401
CdCA1
0.7302
(bd735) NA
0.7292
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HMGB-UBF_HMG-box HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins.... cl00082 58.7933 2.73E-11 84 - 167 specific 238686
HMG-box superfamily High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and... - 58.7933 2.73E-11 84 - 167 superfamily 260179
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44432 PHATRDRAFT_44432 Not available Not available Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003677 GO:0006355 -

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP
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