24429 PRMT5 superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
24429 chr_12 PRMT5 superfamily 190207 193536 - PRMT5 superfamily
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0230
Normalized Mean Residue
Thaps_bicluster_0195
0.28
PseudoU_synth_ScPUS7
0.9383
TrmA
0.9375
SrmB
0.9281
PLN02327
0.9233
WD40
0.9233
SpoVK
0.921
Sun
0.9192
hypothetical protein
0.9168
COG0826
0.9162
hypothetical protein
0.9151
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PRMT5 superfamily PRMT5 arginine-N-methyltransferase; The human homologue of yeast Skb1 (Shk1 kinase-binding protein... - 393.155 3.68E-127 241 - 875 superfamily 266759
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_16141 PHATRDRAFT_16141 187478 254590 67341 Cre03.g176550.t1.1 AT4G31120.1 516025
KEGG description KEGG Pathway
RNA transport map03013
GO:0005737 GO:0008168 GO:0000179 GO:0003880 GO:0008169 GO:0008170 GO:0008171 GO:0008172 GO:0008173 GO:0008174 GO:0008175 GO:0008276 GO:0008326 GO:0008425 GO:0008649 GO:0008650 GO:0009008 GO:0009383 GO:0016205 GO:0016273 GO:0016274 GO:0016278 GO:0016279 GO:0016300 GO:0016423 GO:0016424 GO:0016426 GO:0016427 GO:0016431 GO:0016433 GO:0016434 GO:0016435 GO:0016436 GO:0018423 GO:0018707 GO:0019702 GO:0030792 -

cytoplasm

Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO Category: 
CC

methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group to an acceptor molecule.
GO Category: 
MF

rRNA (adenine-N6,N6-)-dimethyltransferase activity

Details: 
Catalysis of the dimethylation two adjacent A residues in the loop closing the 3'-terminal stem of the 18S rRNA, using S-adenosyl-L-methionine as a methyl donor.
GO Category: 
MF

protein C-terminal carboxyl O-methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group to the oxygen atom of a carboxyl group at the C-terminal of a protein.
GO Category: 
MF

C-methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group to the carbon atom of an acceptor molecule.
GO Category: 
MF

N-methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group to the nitrogen atom of an acceptor molecule.
GO Category: 
MF

O-methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule.
GO Category: 
MF

S-methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group to the sulfur atom of an acceptor molecule.
GO Category: 
MF

RNA methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in an RNA molecule.
GO Category: 
MF

mRNA methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a nucleoside residue in an mRNA molecule.
GO Category: 
MF

tRNA methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in a tRNA molecule.
GO Category: 
MF

protein methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group (CH3-) to a protein.
GO Category: 
MF

NA

Details: 
NA
GO Category: 
NA

2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity

Details: 
Catalysis of the reaction: 2-polyprenyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-methionine = 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-homocysteine.
GO Category: 
MF

rRNA methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a nucleoside residue in an rRNA molecule.
GO Category: 
MF

rRNA (uridine-2'-O-)-methyltransferase activity

Details: 
Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing 2'-O-methyluridine.
GO Category: 
MF

DNA-methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group to a DNA molecule.
GO Category: 
MF

rRNA (cytosine-C5-)-methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to cytosine to form 5-methylcytosine in small subunit ribosomal RNA.
GO Category: 
MF

selenocysteine methyltransferase activity

Details: 
Catalysis of the reaction: selenocysteine + S-adenosyl-L-methionine = Se-methylselenocysteine + S-adenosyl-homocysteine.
GO Category: 
MF

arginine N-methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to an amino group of an arginine residue.
GO Category: 
MF

protein-arginine N-methyltransferase activity

Details: 
Catalysis of the reaction: S-adenosyl-L-methionine + (protein)-arginine = S-adenosyl-L-homocysteine + (protein)-N-methyl-arginine.
GO Category: 
MF

lysine N-methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the epsilon-amino group of a lysine residue.
GO Category: 
MF

protein-lysine N-methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the epsilon-amino group of a lysine residue in a protein substrate.
GO Category: 
MF

tRNA (uracil) methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group from a donor to a uracil residue in a tRNA molecule.
GO Category: 
MF

tRNA (guanine) methyltransferase activity

Details: 
Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing methylguanine.
GO Category: 
MF

NA

Details: 
NA
GO Category: 
NA

tRNA (adenine) methyltransferase activity

Details: 
Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing methyladenine.
GO Category: 
MF

tRNA (cytosine) methyltransferase activity

Details: 
Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing methylcytosine.
GO Category: 
MF

NA

Details: 
NA
GO Category: 
NA

rRNA (adenine) methyltransferase activity

Details: 
Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing methyladenine.
GO Category: 
MF

rRNA (cytosine) methyltransferase activity

Details: 
Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing methylcytosine.
GO Category: 
MF

rRNA (guanine) methyltransferase activity

Details: 
Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing methylguanine.
GO Category: 
MF

rRNA (uridine) methyltransferase activity

Details: 
Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing methyluridine.
GO Category: 
MF

protein C-terminal leucine carboxyl O-methyltransferase activity

Details: 
Catalysis of the reaction: S-adenosyl-L-methionine + protein L-leucine = S-adenosyl-L-homocysteine + protein L-leucine methyl ester. This modification occurs only at the oxygen atoms of the free alpha carboxyl group of a leucine residue at the C-terminus of the protein.
GO Category: 
MF

1-phenanthrol methyltransferase activity

Details: 
Catalysis of the reaction: 1-phenanthrol + X-CH3 = X + 1-methoxyphenanthrene.
GO Category: 
MF

protein-arginine N5-methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the delta-nitrogen atom of peptidyl-arginine residues.
GO Category: 
MF

methylarsonite methyltransferase activity

Details: 
Catalysis of the reaction: S-adenosyl-L-methionine + methylarsonite = S-adenosyl-L-homocysteine + dimethylarsinate.
GO Category: 
MF
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