24744 H2TH superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
24744 chr_13 H2TH superfamily 1004772 1005612 - H2TH superfamily
NCBI ID Ensembl Genomes exon ID
7450534 Thaps24744.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0335
Normalized Mean Residue
Thaps_bicluster_0084
0.43
(bd923) NA
0.8845
(Tp_HSF_1e) regulator [Rayko]
0.848
(bd686) Glyco_transf_22 superfamily
0.8384
(bd524) NA
0.8349
UBCc
0.8266
(bd381) NA
0.8246
(bd621) NA
0.8212
0.8073
(nhe3) Na_H_Exchanger
0.8063
Beach
0.803
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
H2TH superfamily Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase (Fpg) is a DNA... - 62.3414 6.40E-13 215 - 271 superfamily 115485
FpgNei_N superfamily N-terminal domain of Fpg (formamidopyrimidine-DNA glycosylase, MutM)_Nei (endonuclease VIII) base-... - 57.7579 5.82E-11 2 - 169 superfamily 261594
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44981 PHATRDRAFT_44981 149682 296487 450608 Not available AT1G52500.1 Not available
KEGG description KEGG Pathway
Base excision repair map03410
GO:0006281 -

DNA repair

Details: 
The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
GO Category: 
BP
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