24815 PLN03151
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24815 chr_14 PLN03151 346864 349218 + PLN03151

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0264

Most Highly Correlated Transcripts

12836

EEP superfamily
0.9299

263997

(APA1) Adaptin_N
0.8989

7545

hypothetical protein
0.8949

20617

hypothetical protein
0.8945

263599

COG3899
0.8902

261179

Myotub-related
0.8883

22265

hypothetical protein
0.8874

bd654

(bd654) Sec1 superfamily
0.8841

22688

hypothetical protein
0.8823

5869

hypothetical protein
0.8821

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Na_Ca_ex superfamily Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral membrane... - 65.7012 8.74E-13 461 - 533 superfamily 250805
Na_Ca_ex superfamily Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral membrane... - 65.7012 8.74E-13 461 - 533 superfamily 250805
PLN03151 cation/calcium exchanger; Provisional - 112.548 2.70E-26 6 - 533 multi-dom 215604

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49244 PHATRDRAFT_49244 261582 189133 Not available Cre16.g683595.t1.1 AT3G14070.1 479428

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016021 -

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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