24891 zf-CWThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
24891	chr_14	zf-CW	699646	703824	+	zf-CW

Synonyms

NCBI ID	Ensembl Genomes exon ID
7441798	Thaps24891.4, Thaps24891.2, Thaps24891.1, Thaps24891.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0414

Most Highly Correlated Transcripts

23560 hypothetical protein 0.918	25270 hypothetical protein 0.9152	5760 SART-1 0.9137	12836 EEP superfamily 0.9126	24141 FH2 superfamily 0.9113	23469 Plus-3 0.9083
24604 hypothetical protein 0.9082	10398 hypothetical protein 0.908	22252 hypothetical protein 0.9079	25288 Sec6 superfamily 0.9066

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
zf-CW superfamily		CW-type Zinc Finger; This domain appears to be a zinc finger. The alignment shows four conserved...	-	65.5367	6.20E-13	800 - 844	superfamily	254236
zf-CW superfamily		CW-type Zinc Finger; This domain appears to be a zinc finger. The alignment shows four conserved...	-	65.5367	6.20E-13	800 - 844	superfamily	254236
zf-CW superfamily		CW-type Zinc Finger; This domain appears to be a zinc finger. The alignment shows four conserved...	-	65.5367	6.20E-13	800 - 844	superfamily	254236
zf-CW superfamily		CW-type Zinc Finger; This domain appears to be a zinc finger. The alignment shows four conserved...	-	65.5367	6.20E-13	800 - 844	superfamily	254236

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATR_43966	PHATR_43966	Not available	262239	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0008270 GO:0004308 -

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