24926 MATH
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24926 chr_14 MATH 868045 869527 + MATH

Synonyms

NCBI ID Ensembl Genomes exon ID
7451584 Thaps24926.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0467

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0046
 0.42

Most Highly Correlated Transcripts

bd1849

(bd1849) NA
0.8997

bd690

(bd690) NA
0.8743

bd643

(bd643) NA
0.8737

bd1790

(bd1790) NA
0.8736

7628

hypothetical protein
0.8684

bd1934

(bd1934) NA
0.8671

18662

ADK
0.8666

268443

SAICAR_synt_Sc
0.8654

25512

hypothetical protein
0.8563

37100

Zn-ribbon_RPC11
0.8559

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MATH MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-... cl02446 67.7894 1.04E-13 78 - 196 specific 238068
MATH superfamily MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-... - 67.7894 1.04E-13 78 - 196 superfamily 261289
BTB BTB/POZ domain; The BTB (for BR-C, ttk and bab) or POZ (for Pox virus and Zinc finger) domain is... cl02518 61.1383 1.32E-11 242 - 351 specific 250031
BTB superfamily BTB/POZ domain; The BTB (for BR-C, ttk and bab) or POZ (for Pox virus and Zinc finger) domain is... - 61.1383 1.32E-11 242 - 351 superfamily 261320

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 295646 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

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