25852 Peptidase_A22B superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25852 chr_23 Peptidase_A22B superfamily 266655 268473 + Peptidase_A22B superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7448888 Thaps25852.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0119

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0008
 0.44

Most Highly Correlated Transcripts

264762

0.8823

13448

Sec1
0.8785

23473

Cupin_8 superfamily
0.8727

7939

hypothetical protein
0.8726

6911

(Tp_CCCH10) regulator [Rayko]
0.8718

263810

PTZ00430
0.8703

269423

hypothetical protein
0.87

11695

hypothetical protein
0.8683

8821

CHD
0.8677

42646

PRK04342
0.8674

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_A22B superfamily Signal peptide peptidase; The members of this family are membrane proteins. In some proteins this... - 66.9815 1.68E-12 392 - 594 superfamily 260890

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 257871 243042 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005215 GO:0005576 GO:0006810 GO:0008717 GO:0016021 -

GO:0005215

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

GO:0005576

extracellular region

Details: 
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
GO Category: 
CC

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0008717

NA

Details: 
NA
GO Category: 
NA

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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