261283 SmpB
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
261283 chr_2 SmpB 573520 574329 - SmpB
NCBI ID Ensembl Genomes exon ID
7446482 Thaps261283.1, Thaps261283.3, Thaps261283.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0116
(bd737) NA
0.9063
GRX_PICOT_like
0.9017
(bd643) NA
0.9001
DnaJ
0.8977
(bd690) NA
0.8925
Chloroa_b-bind
0.8917
hypothetical protein
0.8903
CHD
0.8903
PRK05279
0.8876
(bd738) NA
0.8825
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SmpB Small protein B (SmpB) is a component of the trans-translation system in prokaryotes for releasing... cl00482 153.66 2.00E-47 65 - 185 specific 187755
SmpB superfamily Small protein B (SmpB) is a component of the trans-translation system in prokaryotes for releasing... - 153.66 2.00E-47 65 - 185 superfamily 260454
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_16021 PHATRDRAFT_16021 226675 309445 47186 Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003723 GO:0006412 -

RNA binding

Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
GO Category: 
MF

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP
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