261577 (RecA_2) RecA-like_NTPases superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
261577 chr_2 (RecA_2) RecA-like_NTPases superfamily 2263909 2265224 + RecA-like_NTPases superfamily
NCBI ID Ensembl Genomes exon ID
7452907 Thaps261577.2, Thaps261577.1, Thaps261577.3
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0191
(bd1837) NA
0.8798
FIG superfamily
0.8773
Sec1
0.8611
EEP superfamily
0.8587
DUF3395 superfamily
0.8568
53EXOc
0.853
EXS superfamily
0.8505
hypothetical protein
0.8504
COG4976
0.8488
S_TKc
0.8488
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RecA-like_NTPases superfamily RecA-like NTPases. This family includes the NTP binding domain of F1 and V1 H+ATPases, DnaB and... - 131.937 9.91E-37 54 - 283 superfamily 266574
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 257054 325273 104759 Cre01.g025300.t1.1 Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003684 GO:0005524 GO:0006281 GO:0006310 GO:0008094 GO:0000166 GO:0017111 -

damaged DNA binding

Details: 
Interacting selectively and non-covalently with damaged DNA.
GO Category: 
MF

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

DNA repair

Details: 
The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
GO Category: 
BP

DNA recombination

Details: 
Any process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction.
GO Category: 
BP

DNA-dependent ATPase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction requires the presence of single- or double-stranded DNA, and it drives another reaction.
GO Category: 
MF

nucleotide binding

Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO Category: 
MF

nucleoside-triphosphatase activity

Details: 
Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.
GO Category: 
MF
Log in to post comments